Phalacrocorax aristotelis (European shag): 142052913
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Entry
142052913 CDS
T11493
Symbol
SPATA13
Name
(RefSeq) spermatogenesis-associated protein 13 isoform X1
KO
K05769
Rho guanine nucleotide exchange factor 4/29
Organism
parx Phalacrocorax aristotelis (European shag)
Pathway
parx04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
parx00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
142052913 (SPATA13)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
parx04131
]
142052913 (SPATA13)
Membrane trafficking [BR:
parx04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
142052913 (SPATA13)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RhoGEF
SOS1_NGEF_PH
PH
SH3_1
SH3_9
SH3_2
RHG20_PH
PH_5
Motif
Other DBs
NCBI-GeneID:
142052913
NCBI-ProteinID:
XP_074939859
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All DBs
Position
1:complement(21954460..22037348)
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AA seq
1294 aa
AA seq
DB search
MTTFPNGCGNGTTVTCIVMDNKEPQNQTTCVSHNGGYSTSNSQEEEIQEDKLSPSKIMRF
FTTPRKRANSSSDRPRSLVLTGNSSTWNALSSIRKMGSFKKLKSSVLQGIQTRECSDILN
ENSVGKHGSNGAVVRVQTNRYSYSGPLHDFQNTVDGLASDCSDAEESDESFLRNTHRSRS
IRRAYGAGRINLLDTDKAQSHQNCTRPTSPVITEPKICEILVKDSENNRIIYRRSKSSDN
LNFLKKSSFKRKSTSNLTDLKAANEKQMPTRTVSVTSADLDKTSGNPERRSKRWKSPIRA
KDFDRVLKLVSNVTDVAWKKDGPKSAAPSLNEESQRTRSNSRLHDDYSRRVSSSTDHDRK
RCTSPVSSPDSSLLGTPCLQSPTAAQDKEAEMNVSVAEDKSLRTSSGIPDSDSLSPTLND
LSPFPNEVFYSDSDEPKATQQFTYEAEIPHVPVRPTTPKPRSPTAEKVKCNMNFQCPNYH
STLSLSSSESEERVEVPGLKLGRNPVCFQDSVQTVYYDDGNEDSGISSHSQLSLNLASGA
EEKKEEVVSDDHWKRSPSQEDEKTDTQKVTPRRWGSGKRSRPRPLSDYGQMSIRSFSIPE
DAVAVESQKTDCTDGENQPGLASVGSAIQSNTVGYHRGRKRRPISVIGGVNFYGSGPTEE
IEGLLTQPVTRPPVPAHQVPPYRAVSARFRPLTFSQSTPIGLDRVGRRRQMRTSNVAADG
GTESSALADDNGSEEDYSYEELCQATPRYLQPGGEQLAINELISDGSIVYAEALWDHVTM
DDQELGFKAGDVIRVLEASNKDWWWGRNEDKEAWFPASFVRLRVNQEEVPENCSSIQDEE
QDADISKHRQKIAENKDQMRTNVIQEIMNTERVYIKHLKDICEGYIRQCRKHTGMFTTAQ
LSTIFGNIEDIYKFQRKFLKDLEKQYNKEEPHLSEIGSCFLQHQEGFAIYSEYCNNHPGA
CIELAKLMKQGKYRHFFEACRLLQQMIDIAIDGFLLTPVQKICKYPLQLAELLKYTTQEH
SDYNNIKAAYEAMKNVACLINERKRRLESIDKIARWQVSIVDWEGPDVLARSSELIHSGE
LTKISKQGKSQQRTFFLFDHQLVFCKKDLLRRDILYYKDRIDMDEMEIVDAEDGRDKDFN
INVKNAFKIINRATEEIHLFCAKKQEDKKRWMEACESERRRVQEDKEMVTKVPFAQFHWQ
NIHKEDSSTRMEISENQKKQAMQNARKSRHGKIKGVSYNGCPVPPPHQSLHPIHQRHITV
PTSIPQQQVFALAEPKRKPSLFWHTFNKLTPFKK
NT seq
3885 nt
NT seq
+upstream
nt +downstream
nt
atgacaacgtttccgaatggctgtggaaatggcaccactgttacttgtatagttatggat
aataaagagccccaaaaccagactacctgtgtcagtcataatgggggatacagcaccagc
aacagtcaggaggaggaaattcaagaggataagctcagcccttccaaaatcatgcgcttt
ttcaccacccctcggaaacgggctaattccagctctgacaggcctcgttctctggttttg
acgggcaactcatccacgtggaatgctttatcttccatcagaaaaatgggatctttcaag
aagttgaaatcatctgttctccaaggaattcaaacaagggaatgctcagacatcttaaat
gagaacagtgtaggcaaacatggttcaaatggggcagtggtgagagttcagactaacagg
tattcctattcggggcctctccatgatttccagaacacagtggatggtttagcttctgac
tgctctgatgcagaggagagtgatgagtctttcctgaggaatactcatcgctcacgcagc
atcaggcgggcttatggtgctggccgcataaacctgctagacacagataaagctcagagt
catcagaactgtactaggccaacatcacctgtcatcacagagccaaagatctgtgaaatt
ttggtgaaagactctgaaaacaacaggatcatttatcggagaagcaaaagttcggataat
ttgaactttctgaaaaaaagctcattcaaacggaagtcgacctcaaacctcactgacctc
aaggctgcgaatgaaaaacagatgccaacaaggactgtgagtgttacttctgctgacttg
gacaaaaccagtgggaaccctgagaggaggtccaagcgatggaagagccctatcagggca
aaggattttgaccgagttttgaaacttgtcagtaacgtcacagatgttgcatggaagaag
gatggcccgaagagcgccgctccttctcttaacgaggagtcccagagaacaaggtcaaac
agcagactgcatgatgactactcccgcagggtttccagcagcacagatcatgacagaaag
cggtgcacctccccggtatctagtccagactcttccttgctgggaacaccttgtctgcaa
agtcccacagctgctcaggataaagaggctgaaatgaatgtatctgtggctgaagacaaa
agcctcaggacatcatcaggtatcccagactctgatagcttatcacccacattgaatgac
cttagtccatttcccaatgaagtgttttattcagattcggatgaaccaaaagctacccag
cagtttacatatgaagctgaaatccctcatgttccagtcaggccaactactccaaagcct
cgaagtcccactgcagagaaggtcaagtgcaatatgaatttccagtgcccaaactatcac
agcacattgtcactgagctcatcggagagcgaggagagagtcgaggtaccagggctgaag
ctgggcaggaatcctgtttgcttccaggactccgtgcaaaccgtgtattatgatgatgga
aatgaagacagtggcataagcagccactctcagctaagcctcaatttagcctctggtgct
gaagagaaaaaggaagaggttgtttctgatgaccactggaagaggtccccatcccaggag
gacgaaaagacagacacacaaaaggtcacacccaggagatggggctctggaaaaagatct
cgtcccagacctctctcagactatggccaaatgtccatcagaagtttctcaataccagaa
gatgcagttgcggtggagtctcagaagacagactgcacagatggagaaaatcagccagga
ctggcttctgttgggtctgcgatccaaagcaatacagtaggttaccacagagggcgaaaa
agaagacccatctccgtaataggtggggtcaatttctatggaagcggtccgacagaagag
atagaaggtctgctgacacaacctgttacacggccacctgttccagcgcaccaggtaccc
ccttacagagctgtttcagccaggtttcggccgctcaccttttcacaaagtacccccatt
ggcctggaccgggtcggacgaaggcggcagatgagaacatctaacgttgctgcagatggt
gggactgaatcttcagctttagcggacgacaatggcagtgaggaagactacagttatgag
gagctctgccaagccactcccaggtacctgcagcccggaggagaacagctagcaattaat
gagctgataagtgatggcagcattgtctatgcagaagctctctgggaccatgtgactatg
gatgatcaagagctgggcttcaaagctggagatgtcattagagttctagaagcttccaac
aaagactggtggtggggaagaaacgaggacaaggaagcctggtttccagctagctttgtc
aggctgcgagttaatcaggaagaagtgccagaaaattgtagtagtatccaggatgaagaa
caagatgcagatattagcaagcatcgtcagaaaatagctgaaaacaaggatcagatgaga
accaacgttatacaggaaattatgaacacagaacgagtctatatcaagcatctcaaggac
atctgtgagggttatattcggcagtgtcgcaaacatacaggaatgttcaccacagctcag
ttaagcaccatttttggaaatattgaagatatttacaagttccaaaggaaatttctgaag
gatcttgagaaacagtacaacaaagaggaacctcatctaagtgaaatagggtcatgtttt
cttcaacatcaagaaggctttgctatttattcagagtattgtaacaatcatcccggtgcc
tgcattgaacttgccaagctaatgaaacagggcaaataccgtcacttctttgaggcctgt
cgcttgcttcagcagatgattgacattgccattgatggttttcttctcacgcctgttcag
aaaatctgcaaataccctctgcagcttgcagaattgctcaaatacaccactcaggaacac
agtgattataacaacataaaagctgcgtatgaggctatgaagaatgtagcgtgcctgatc
aatgagcgaaaacgaagactagaaagcatagacaagattgcacgttggcaagtctctatc
gtagactgggagggaccagacgtgttagccagaagctcagaactgatccactcaggagaa
ttgaccaaaatatcaaagcaaggaaaaagccagcagaggacgttcttccttttcgaccat
caacttgtgttctgtaaaaaggacttactgagaagggacatcttgtattataaggatcgt
attgacatggatgagatggaaattgtggacgctgaagatggcagagacaaagactttaac
attaatgtcaaaaatgcttttaagataataaacagagcaacagaagagattcatttgttc
tgtgcaaaaaagcaggaggataaaaagaggtggatggaggcgtgcgaaagtgagaggaga
agagttcaggaagacaaggaaatggtgacaaaagttccatttgcacaattccattggcaa
aacatacacaaagaagacagcagcactagaatggaaatctcagaaaaccagaagaagcaa
gccatgcagaatgcccgaaagtcaaggcatggaaaaattaaaggtgtaagctataatggg
tgtcctgtgcctcctccacaccaaagcctgcatcctattcatcagcgccacatcactgtg
cctaccagcatcccacagcagcaggtttttgccctggcagaacccaagcggaagccatcc
ctcttctggcataccttcaacaaactcaccccctttaaaaagtga
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