Phalacrocorax aristotelis (European shag): 142052937
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Entry
142052937 CDS
T11493
Symbol
TRIP13
Name
(RefSeq) pachytene checkpoint protein 2 homolog
KO
K22399
pachytene checkpoint protein 2
Organism
parx Phalacrocorax aristotelis (European shag)
Pathway
parx04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
parx00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
142052937 (TRIP13)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
parx03036
]
142052937 (TRIP13)
Chromosome and associated proteins [BR:
parx03036
]
Eukaryotic type
Centromeric chromatin formation proteins
SAC (spindle assembly checkpoint) factors
Others
142052937 (TRIP13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_lid_TRIP13_C
AAA
TRIP13_N
AAA_22
nSTAND3
AAA_16
Viral_helicase1
AAA_14
AAA_18
Cytidylate_kin
RuvB_N
AAA_5
IstB_IS21
NPHP3_N
AAA_24
AAA_28
bpMoxR
TsaE
ATPase_2
NACHT
AAA_30
RNA_helicase
ABC_tran
AAA_33
DUF815
AAA_7
AAA_11
AAA_25
AAA_17
TIP49
PduV-EutP
Rad17
Mg_chelatase
AAA_19
SLFN-g3_helicase
AAA_3
NB-ARC
PhoH
nSTAND6
NTPase_1
Motif
Other DBs
NCBI-GeneID:
142052937
NCBI-ProteinID:
XP_074939931
LinkDB
All DBs
Position
2:63224452..63238941
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AA seq
438 aa
AA seq
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MDKAAGDLKQALPNVCDGIQIHVEVHQKSSSVAKKEDIRMSVLTLLNRHNIVFGDYKWTE
FDDGFLNSNVQSVSIVDTDLKLKDRQPIDLSKSSLSLHIFHLNEEGPNSENLEEENEDII
AANHWVLPAAEFHGLWESLIYDTEVKSHLLDYVTTTLLFSDKNVDSNLVSWNRVVLLHGP
PGTGKTSLCKALAQKLTIRLSYRYRYGQLIEINSHSLFSKWFSESGKLVTKMFQKIQELI
DDKDALVFVLIDEVESLTAARSAFRAGTEPSDAIRVVNAVLTQIDQIKRYPNVVILTTSN
ITEKIDMAFVDRADIKQYIGPPSTAAIFRIYLSCLEELMKCQIIYPRQQLLTLRELEMIG
FVENNVSRLSLVLKEISRRSEGLSGRVLRKLPFLAHALYIQSPSVTMTVFLQALSLAVDK
QFEERQKLAERKKLADCV
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atggacaaagccgctggggatttgaagcaagcgctcccaaacgtgtgcgacggcattcaa
atacacgtggaggttcatcagaaatcgagcagtgtggccaagaaagaagatatcaggatg
agtgtcttaactctgttgaacagacataacattgtgtttggtgattacaagtggacagag
tttgacgatggtttccttaacagcaatgtgcaatctgtgtcgattgtggatacggatctg
aaactgaaagacagacagcctattgacttgagcaaaagcagtctttctcttcatattttt
catctgaatgaagaaggaccaaactctgaaaacctggaagaagagaatgaggatatcatt
gcagctaaccactgggtgctaccagcagctgaattccatggcctttgggaaagtctcata
tatgacactgaagtaaaatcacacttgcttgattatgtgacgacaacgttactcttttct
gacaaaaacgttgacagcaacctggtatcgtggaacagagttgttctgctgcatggccct
cctggaactgggaaaacctctctctgtaaagcattggctcagaagctgacaattcgactg
tcatacaggtataggtatggacagttaattgagataaacagccatagccttttctctaaa
tggttttctgagagtggcaagcttgtaaccaagatgttccagaagattcaagagttaatt
gatgacaaagatgctcttgtatttgtactgattgatgaggtggaaagcctcacagcagcc
cgcagtgccttcagggcaggcacagagccttcagatgctattcgtgtggtgaatgctgtg
ctgacacaaatagatcagattaaaaggtatcccaatgtagttatcctgactacttcaaat
attacggagaaaattgacatggcctttgtagacagggctgacataaagcaatacattgga
cctccatccactgcggcaatatttagaatatatctttcttgcttggaagaactgatgaag
tgtcaaataatatatcctcgacagcagctcctgaccctcagagagctagagatgataggc
ttcgtagaaaataatgtgtcacggttaagccttgtattaaaagaaatctcaagaagaagc
gaaggtcttagtggccgggtcctgagaaaacttcctttcttagcacatgcgctttatatt
caatcccccagtgttacaatgacagtgtttcttcaggctctttcccttgcagtagacaaa
caatttgaagaaagacagaaacttgcagaaagaaagaaacttgcagactgtgtgtga
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