Phalacrocorax aristotelis (European shag): 142053000
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Entry
142053000 CDS
T11493
Symbol
NUP153
Name
(RefSeq) nuclear pore complex protein Nup153 isoform X1
KO
K14296
nuclear pore complex protein Nup153
Organism
parx Phalacrocorax aristotelis (European shag)
Pathway
parx03013
Nucleocytoplasmic transport
parx03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
parx00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
142053000 (NUP153)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
142053000 (NUP153)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
parx03019
]
142053000 (NUP153)
Messenger RNA biogenesis [BR:
parx03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
142053000 (NUP153)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup153
Zn_ribbon_RanBP
Nup_retrotrp_bd
Motif
Other DBs
NCBI-GeneID:
142053000
NCBI-ProteinID:
XP_074940088
LinkDB
All DBs
Position
2:complement(70612898..70660245)
Genome browser
AA seq
1453 aa
AA seq
DB search
MASGGGGGGGGKIRTRRYHLGAVKPPYARSKQGIISRVTESVKSIVPAWLQKYFNKSEDE
CVDTNESTSQEENPVNYHDDYANEDTMVIDGRVTPESARINLEEPSTSRSALNFSDVLTR
PSLHRSHLNCTMLDSTVPHCQPSTSSSLGIGSPGLSLVKEIKDSTSQHDDDNISTTSGFS
SRASDKDITVSKNTSAPLLWSTEAERAHSLSQHPAASSKKPAFNLSAFGSPSPSLGNTSV
FKTSQLGDSPFYPGKTTYGGAAAAARETKARIAPYQPPVRRQMKAKQASVQSYGVTSSTA
RRILQSLEKMSSPLADAKRIPSSVSSPLSSPVDRSLLNITSFQSKQKQVESQHPPVQKLM
TPKAISLSVSRTQYFKPSLTPATDSSKIHQRVDIRHKGMREKSFPAEQQVKPSESNLTYP
KFGTPASNGLSSGGGVGGGGGKMRRERGVHYVSKPGQEQQEVEEPVLPKVPLPISTASLP
SFNFSFLASSPVSLSPSTVSTAMTNKVQPASNVGSPVFRFSSPIVKSTETEVLPPLSQIG
FTFSVPVVKSGELSGSSDTPVTSLLTLDTATVNSTSNKKEKEEEYDGLSKPAEVLKEGSV
LDILNSPGFTPVKTHSSASAQPVTSTVVYTRPAISSFSAGKDTSKQASSFWQSDTYDPCL
QNKTTDGKCVTCQAAKASTVESTKQTISSSQCATSKVAVPTAGTLGFEDKFKTAPNTWDC
DTCLVQNKSEATKCVACETPKPGTGVMPALTLPAVTDNAVTVTSSSSGTDTTVTLGFGDK
FKKPKGSWDCAVCLVSNKAEDSKCVACQSEKPGSSVPVTSSSVSAFSASSGGFLDLDKFK
KPEGSWDCEVCLVQNKAEATKCVACESAKPGTKAELKGFGTSAASTNAAMPSFTFSVQSS
SSDSSQTLGSMGNFKFGEQGSFKFGIASESASSNTTTGGFKFPVSSGDFKFGVSSSDSKS
EDGKKEGKSNSFTFGLPSTSSQAPSTFQFGTVSLGQQEKKEEPVLGGFGFGTSSTSSIAT
NENKTGVSGFTFGTVAEKEVASPGLVFKKSDEKKDETLSTKGGFSFGSVEAAPASQFVLG
RTEEKQDSVTSATPLPFGKKADNEELKAQPIFSAGTAEHTKEESAAKPIFNFSFVKPSEK
ESEQAKTSFAFGAQTSTSDQGAAKPSFSFLSSSSSSTGVPATSANSSSVFGSAISSSNPQ
PVPTPFVFGQPSNTVSSSVFGNSAEPAASQSFGFSQENKPTTTSSSTGTALTSFLFGSGA
SGANTANSGFTFGATTTSSSTGSSNSFLFGSGPPAPAAGPAFGTSQPPAFGQSQGSSQPS
APSFGSLSTTLFSAGAQPAPPAFGSVTSSTQPSMFGQQATQQPGFGSGTTGAGSLFQFGS
NTSSFNFANNPRVFTFGANPPAPAAPAQPSGSSGFSFSQPPAFTVGTNGKNVFSASGSSV
SGRKIKTAVRRRK
NT seq
4362 nt
NT seq
+upstream
nt +downstream
nt
atggcctcgggcggcggcggaggcggcggcggcaagatccggacccggcggtaccacctg
ggtgctgtgaagcctccctacgcgaggagcaagcagggaatcattagcagagtgacagaa
tcggtgaagagcattgtaccagcatggttacagaagtatttcaataaaagtgaagatgaa
tgtgtagatacaaatgaatctacaagccaggaagagaatccagtgaactatcacgatgat
tatgcaaatgaagataccatggtgattgatgggagagtcacgcctgaatcagcaagaatt
aatttagaagaaccatccacgagtagatctgcattgaacttctcagatgtattaacaagg
ccgtctcttcatcggagccatttgaactgtaccatgttggattccacagtaccacattgt
cagccctctacatcatcttcacttggcattggcagtcctggactgtctcttgtaaaagaa
ataaaagattctacctctcagcatgatgacgataacatctcaacaaccagtggcttctcc
tctagagcgtctgataaagatatcacagtttcaaaaaatacttcagcaccactgctctgg
tccacagaggctgaaagagctcattccctctcacagcatcctgcagctagctctaaaaaa
cctgcattcaatttatctgcttttggatctccctctccttcgcttggaaacacttctgtc
tttaagacaagccagcttggggattctcctttttatcctggaaagaccacttacggtggt
gcagctgcagcagcaagggagacaaaagcgcgaattgctccttatcagccaccagtaaga
agacaaatgaaagctaaacaagcaagcgtgcaatcctatggtgtgacaagttccacagca
cggcgcatcttgcagtcattggagaagatgtcaagtcctttggcggatgctaaaaggatt
ccatcttctgtttctagtccgctgtcttctcctgtggacaggagcctgctgaatattact
agcttccaatccaaacaaaaacaggtggaatcacagcatccacctgtccagaaactcatg
acaccaaaggcaatctctctgtcagtgagccggacccagtattttaaaccatctttgact
ccagctactgattccagcaaaattcaccagagagtagatataaggcacaaaggcatgaga
gagaagagttttcctgcagaacagcaagtaaaaccatctgaaagcaatttgacctacccc
aaatttggtactcctgcatccaatggtctgtcttcaggaggaggagtgggtggtggcggt
ggcaagatgagaagggaaagaggagtacactatgtatcaaaacctggacaagaacaacag
gaagtggaagaaccagtactaccgaaagtacccctacccatcagtactgcatcactgcct
tcgttcaacttcagttttcttgccagtagtcctgtctcactgtcaccaagcactgtttca
acagcaatgacgaacaaggtacaaccagcaagtaatgttggcagtcctgtgttcagattt
tcatctccaattgtgaaatctactgagacggaagtgctacctccgttgtctcagattggg
tttacatttagtgttcctgttgtaaaatcaggagagctttctggatccagtgatacacca
gtgacgtccttacttactctagataccgccactgtaaacagcaccagcaataagaaggaa
aaagaagaagaatatgatggcctctccaaacctgcagaggtcttaaaggaaggaagtgtg
ttagacattctaaacagccccggctttacgcctgtgaaaacacactcctctgcatctgca
cagcctgttacaagcacggtggtctatacaaggcctgcaataagtagtttttctgcagga
aaagacacttctaaacaagcatcctcattttggcagtctgacacgtatgacccatgcctg
caaaacaaaaccacagatggcaaatgtgtaacatgccaagctgctaaagcatcaacagtt
gagagtacgaaacagacgataagctcaagtcaatgtgccacctctaaggtggcagtccct
acagcagggacgttgggttttgaagacaaatttaaaacagcgcccaacacatgggattgt
gatacctgtctggtccagaacaaatccgaagctacaaaatgcgtagcgtgtgagacacca
aagcctggaacaggagtaatgcctgctctgacgttgccggcggtcacagacaacgcggtg
acagtgacatcctcctccagcggcactgacacaacagtcactttggggtttggagacaaa
tttaagaagccaaaaggctcttgggactgtgcggtgtgccttgtatcaaataaggcagaa
gacagcaaatgtgtagcttgtcagtccgagaaaccagggagttcagtgcctgtgactagt
agcagtgtttctgcattttctgcttcttctggaggatttctggatttagacaaattcaag
aagcccgaaggaagctgggattgtgaggtctgcttggtccaaaacaaagcggaagccaca
aaatgtgtagcctgtgaaagtgcaaagccaggcaccaaagcagagctcaaaggttttggg
acctctgctgcgtccacaaatgctgcaatgccatcatttacattcagtgtccagtcatcc
tcctctgattcttctcaaacattaggtagcatgggaaactttaaatttggagaacaaggg
agcttcaagtttggcattgcctctgaatctgcatcctccaacactacgactgggggattt
aagtttcctgttagttcaggggacttcaaatttggagtttcttcctcagactctaaatca
gaagacggtaaaaaagaaggtaaaagtaacagttttacctttggacttccatctacaagc
agtcaggctccttcaacatttcagtttgggacagtgagcctgggacagcaggaaaagaaa
gaggaaccagttttgggaggctttggttttggcacgagttctacttcttccatagctacc
aatgagaataaaaccggagtcagtggcttcacttttggaactgtggcagagaaggaggta
gcatcaccgggtcttgtgtttaagaaatcagatgagaaaaaggatgaaaccctttcaaca
aagggagggttctcttttggcagtgtagaggctgcacctgcctcacagtttgttttggga
aggacagaagagaaacaggactctgtcacttctgccactccattaccgttcggaaagaaa
gctgacaatgaagagttgaaggcacaacctatcttttcggctgggacggctgagcatacc
aaagaggagagcgcagcaaaacctatattcaattttagtttcgttaaaccatcagagaag
gaaagtgagcaggcaaagacatcttttgcatttggggcacaaaccagtacttcagaccaa
ggagcagcaaagccatccttcagcttcttgagctcaagttcctccagcacaggtgtaccc
gccacttcagccaacagcagcagtgtttttggcagtgccatctcctcctcaaatcctcag
ccagttcccactcccttcgtgtttggacagcccagcaacactgtgagcagctctgtcttt
ggcaattctgcagaacctgcagcatcccagtcatttggcttctctcaagaaaacaagcca
acaaccacatcttccagcaccggcacggctcttacttcatttctctttggttcgggagcc
agcggtgccaatacagcaaattcaggctttacctttggggccacaaccacgtcaagttca
acagggtcgtccaattcgttcctgtttggctctgggcctccggcgcctgctgccggccca
gcgttcggcaccagccagccaccagcatttggccagagccaagggtccagccagccaagc
gctccaagttttggatcgctgtcgacaacgttgttttcagccggcgctcagcctgctcct
cctgccttcggctcggtgacgagcagtactcagccctccatgttcggacagcaagcgacc
cagcagccagggtttggctccggtaccaccggtgctggttctctattccaatttggaagt
aatacgtctagtttcaactttgcaaataaccccagagtatttacttttggtgcgaatcct
cctgcaccagcagcaccggcacaaccttctggctcttcaggattttcattcagccagcct
ccagcatttacagtggggactaatgggaaaaatgttttctctgcctctggatcttcagtt
tctggtcggaagataaagactgcagttagacgtagaaaataa
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