Phalacrocorax aristotelis (European shag): 142053331
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Entry
142053331 CDS
T11493
Symbol
PDS5B
Name
(RefSeq) sister chromatid cohesion protein PDS5 homolog B isoform X1
KO
K11267
sister chromatid cohesion protein PDS5
Organism
parx Phalacrocorax aristotelis (European shag)
Pathway
parx04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
parx00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
142053331 (PDS5B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
parx03036
]
142053331 (PDS5B)
03400 DNA repair and recombination proteins [BR:
parx03400
]
142053331 (PDS5B)
Chromosome and associated proteins [BR:
parx03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Other sister chromatid cohesion factors
142053331 (PDS5B)
DNA repair and recombination proteins [BR:
parx03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Shu complex and associated proteins
142053331 (PDS5B)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDS5
PI-TkoII_IV
EnP1_C
Motif
Other DBs
NCBI-GeneID:
142053331
NCBI-ProteinID:
XP_074940898
LinkDB
All DBs
Position
1:25355148..25465798
Genome browser
AA seq
1448 aa
AA seq
DB search
MAHSKTRANDGKITYPPGVKEISDKISKEEMVRRLKMVVKTFMDMDQDSEEEKELYLNLA
LHLASDFFLKHPDKDVRLLVACCLADIFRIYAPEAPYTSPDKLKDIFMFITRQLKGLEDT
KSPQFNRYFYLLENIAWVKSYNICFELEDSNEIFTQLYRTLFSVINNGHNQKVHMHMVDL
MSSIICEGDTVSQELLDTVLVNLVPAHKNLNKQAYDLAKALLKRTAQAIEPYITNFFNQV
LMLGKTSISDLSEHVFDLILELYNIDSHLLLSVLPQLEFKLKSNDNEERLQVVKLLAKMF
GAKDSELASQNKPLWQCYLGRFNDIHVPIRLECVKFASHCLMNHPDLAKDLTEYLKVRSH
DPEEAIRHDVIVSIVTAAKKDLLLVNDHLLNFVRERTLDKRWRVRKEAMMGLAQIYKKYS
LQSEAGKEAAKQISWIKDKLLHIYYQNSIDDRLLVERIFAQYMVPHNLETNERMKCLYYL
YATLDSNAVKALNEMWKCQNLLRHQVKDLVDLIKQPKTDASSKAIFSKVMVITRNLPDPG
KAQDFMKKFTQVLEDDEKIRSQLEMLVSPTCSCKQAEGCVREITKKLGNPKQPTNPFLEM
IKFLLERIAPVHIDTESISALIKQVNKSIDGTADDEDEGVPTDQAIRAGLELLKVLSFTH
PISFHSAETFESLLACLKMDDEKVAEAALQIFKNTGSKIEEDFPHIRSALLPVLHHKAKK
GPPRQAKYAIHCIHAIFSSKETQFAQIFEPLHKSLDPSNFEHLITPLVTIGHIAMLAPDQ
FAAPLKSLVATFIVKDLLMNDRLPGKKTTKLWVPDEEVSPETLVKIQAIKMMVRWLLGMK
NNHSKSGTSTLRLLTTILHSDGDLTEQGKISKPDMSRLRLAAGNAIVKLAQEPCYHEIIT
LEQYQLCALAINDECYQVRQIFAQKLHKGLSRLRLPLEYMAICALCAKDPVKERRAHARQ
CLVKNINVRREYLKQHAAVSEKLLSLLPEYVVPYTIHLLAHDPDYVKVQDIEQLKDIKEC
LWFILEILMAKNENNSHAFIRKMVENIKQTKDAQGPDDPKMNEKLYTVCDVAMNIIMSKS
TTYSLESPKDPVLPARYFTQPDKNFSNTKNYLPPEMKSFFTPGKPKAANVLGAVNKPLSS
AGKQSQSKSSRMETVSNASSSSNPSSPGRIKGRLDSTEMDHSENEEFTLASPLPGKKTDK
RDDSDLVRSEMEKPRGRKKAAITDSEEKLSIDDLNKLGQEQKLRGSQRGRKRPAVVSESD
ESQWQEEKRLKEDVIESEDEQNSPPKKGRRGRPPKANNGGTPKEEPVAKSSKRSKKKQTP
AAAAEEEEEEEERQTENIEQKPKGRQNRAPKRTPQRAEPSETSTVESAQSTPQKRRGRPS
KTPPSQQKKVRAGRSKQAASKENESSEEMDVFQSGSPVSDDIPQEEVMEEEEVSTINVRR
RTSKRERR
NT seq
4347 nt
NT seq
+upstream
nt +downstream
nt
atggctcactcaaagacgagagccaatgatggaaaaatcacatatcctccaggagtcaaa
gaaatctctgataaaatttctaaagaagagatggtgagaaggctaaagatggttgtgaaa
actttcatggatatggaccaggactctgaagaagaaaaggagctctacctaaatcttgct
ttacatcttgcttcagactttttcctcaaacatcccgataaggatgtacgtttgctggta
gcatgttgtcttgctgatattttcagaatttatgcccctgaagccccgtacacttcaccg
gataaactcaaggatatatttatgttcataacaaggcaacttaagggtttagaagataca
aaaagcccacagtttaatcgatatttttatttgcttgagaacattgcctgggtcaagtct
tataacatatgctttgaattagaagacagcaatgagatttttacacaattgtatagaacg
ctgttttcagtaataaacaacggtcataaccaaaaagtacatatgcacatggttgatcta
atgagctctatcatttgtgagggagatactgtgtcacaggaacttttggatacagtatta
gttaatctagtgccagcacataagaatttaaacaagcaagcctatgatttggcgaaggct
ttactaaagaggacagcgcaagcaattgaaccatatattactaatttcttcaatcaggtc
ctcatgcttggtaaaacctcaattagtgacttgtcagagcatgtgtttgacttgattctg
gagttatacaatattgacagtcacctcttgctttctgttctgccacagcttgaattcaaa
cttaagagcaatgacaatgaagaacgcctgcaggttgtaaaacttctagcaaaaatgttt
ggggcaaaggattcggagttggcatctcaaaacaaaccactttggcagtgctacctgggg
aggtttaatgatatccatgtacctattcgtcttgaatgtgtgaaatttgcaagtcactgc
cttatgaaccatcctgacctagcaaaagacttaacagaatatcttaaagtaaggtcgcat
gatcctgaagaggccataaggcatgatgttatagtatccatagttactgctgctaaaaaa
gatcttttgcttgtcaatgatcacttgcttaattttgtcagagaacgaacattggacaaa
cggtggagagtgaggaaggaagctatgatgggacttgcacagatatacaagaaatattca
ttacaatcagaagcaggaaaagaagcagcaaaacagatatcatggatcaaagataaactt
ctgcatatatattatcaaaacagtattgatgaccgattacttgttgaacgcatctttgct
cagtacatggtccctcacaacttggaaacaaatgaacgaatgaaatgtttatattacctt
tacgcaacactggattcaaatgctgtgaaagcattgaatgaaatgtggaaatgtcaaaat
ctgctacgacatcaagtcaaggatttagttgacctaataaaacaacccaaaacagatgcc
agcagtaaagctatattctcaaaagtgatggttataacaagaaaccttcctgatccaggg
aaagctcaagatttcatgaaaaagttcacacaagttctagaagatgatgaaaaaataaga
agtcagttagaaatgcttgttagcccaacatgttcttgtaaacaggctgaaggatgtgtg
agggaaataacaaagaagctgggcaacccaaaacaaccaacaaatcccttcctggaaatg
ataaagtttctacttgagagaattgctcctgtgcacattgatactgaatccatcagtgcc
cttatcaagcaagtaaacaagtctatagatggaacggctgatgatgaagatgagggtgta
cctactgaccaggcaatcagagcaggtcttgaattgcttaaggtactttcatttacgcac
cctatctcatttcattcagctgaaactttcgaatctctcctggcttgcttgaaaatggat
gatgaaaaagtggcagaagctgcattacaaatttttaaaaatacaggaagtaaaattgaa
gaagactttcctcatatacgatctgctttgcttccagtgttgcatcataaagctaaaaaa
ggaccccctcgtcaagccaagtatgctattcactgcatccatgcaatattttccagcaaa
gaaactcagtttgcacagatatttgagccactgcataaaagtctggatccaagcaatttt
gagcatctcattacgccgttggttactattggccatatagccatgctagcacctgatcaa
tttgctgcccctttgaaatctttggttgccacttttattgttaaagatttgctgatgaat
gataggcttccaggaaaaaagacaacaaaactttgggtcccagatgaagaagtgtctcct
gaaacgcttgttaaaattcaggcaatcaagatgatggttcgatggttgctaggaatgaag
aacaaccacagcaagtcaggaacctctactctgaggttgctaacaacaatactacacagt
gatggagatttaacagagcagggaaaaattagtaaacctgacatgtctcggttgaggctg
gctgcaggaaatgctattgtgaagttggcacaagaaccttgttaccatgaaatcatcact
ttagaacagtaccagctgtgtgcgctagccataaatgatgaatgttaccaagtgagacaa
atatttgctcagaaacttcacaaaggcctttctagactacggctgccactagaatatatg
gctatctgtgcactgtgtgcaaaagatccagtgaaagagagaagagctcatgccaggcag
tgccttgtgaagaacataaatgtcagaagggaatatctgaagcaacatgcggcagttagc
gagaaactgttgtcacttctaccagagtatgttgttccttatactatccatcttctagct
catgacccagattatgtcaaagtccaggacattgaacaactcaaggacattaaagagtgc
ctgtggttcatactggaaatattgatggctaaaaatgaaaacaacagtcacgcatttatc
agaaaaatggtagaaaatatcaaacagactaaggatgctcaaggaccagatgatccaaaa
atgaatgaaaaactatacacagtgtgtgatgtagcaatgaatataattatgtcaaagagt
acaacatacagtttggaatcccctaaagaccctgtacttccagccagatattttactcaa
cctgacaagaatttcagtaacaccaaaaattatcttcctcctgaaatgaaatcttttttc
actcctggaaagcccaaagcagccaatgttcttggagcagttaataagcctctttcgtca
gcaggcaagcagtctcaatccaaatcttcacgaatggaaactgtaagcaatgccagcagc
agttcaaatccaagctctccaggaaggatcaaagggaggcttgacagtactgaaatggac
cacagtgaaaatgaagaattcacgctggcttcacccttaccagggaagaaaactgacaaa
agggacgactctgatcttgtaaggtcagagatggagaagcctagaggaaggaagaaagca
gccatcacagattcagaagagaaactaagcatagatgacctgaacaaactgggtcaagaa
cagaagcttagaggtagtcaacggggaaggaagagacctgcagttgtttcagaatctgat
gaatcacaatggcaagaggaaaaaaggctaaaagaagatgtaatagaaagtgaagatgaa
cagaacagtccaccaaagaaagggagaagaggacgccctcccaaagcaaataatggggga
acaccaaaggaagaaccagtagcaaagtcatcaaaacggagcaaaaaaaaacaaacgcca
gcagctgcagcagaagaggaggaggaggaggaagaaaggcaaactgaaaacattgaacaa
aaaccaaaaggcaggcaaaatagggcaccgaaaagaacaccgcaaagagcagaaccatct
gaaactagtacagttgaatcagcacagtctacgccacagaaaagacgaggaaggccatca
aaaacaccaccatcacagcaaaaaaaagtccgtgcgggacgttccaaacaagcagccagt
aaagagaatgaatctagtgaagagatggatgtatttcagagtggttcacctgtcagtgat
gacattccccaggaagaagtaatggaagaagaggaagtttccacaatcaatgtccgtcgc
agaacttccaaaagggaaagacgatga
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