Phalacrocorax aristotelis (European shag): 142053358
Help
Entry
142053358 CDS
T11493
Symbol
TAF4B
Name
(RefSeq) transcription initiation factor TFIID subunit 4B isoform X1
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
parx Phalacrocorax aristotelis (European shag)
Pathway
parx03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
parx00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
142053358 (TAF4B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
parx03021
]
142053358 (TAF4B)
03036 Chromosome and associated proteins [BR:
parx03036
]
142053358 (TAF4B)
Transcription machinery [BR:
parx03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
142053358 (TAF4B)
Coactivators
SAGA/TFTC/STAGA complex
142053358 (TAF4B)
Chromosome and associated proteins [BR:
parx03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
142053358 (TAF4B)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TAF4
TAFH
Motif
Other DBs
NCBI-GeneID:
142053358
NCBI-ProteinID:
XP_074940996
LinkDB
All DBs
Position
2:117918636..117994355
Genome browser
AA seq
847 aa
AA seq
DB search
MSAPVAAAAAPVTLMPGGHPEQAAAAGPAPDPGGPVAKVPGGPPTPAAPQPPPPPPRPAA
VPAGTPKARVAASGAPRPVAPKGPPTATLQLPANFQLPPGTVLIRSSNGQLMLVSQQAIA
RAQSQPQNQPQNNTSVRPSLPTSTPTIKICAVQNSGTQLLKKVAATPVKPLAQTTNAVAS
TVQTPAVIQPAAAPASVTTVTAVKPSSTGTPVKLPVTGPPAQAISQKAVSVKAEGTTVAQ
TSISTETLENVKKCKNFLATLIKLASSGSQAPEMGQNVKNLVQNLLEAKIEPEEFTKKLY
TELKSSPQPYLVPFLKKSMLALRQLMPNAQSFIQQCMQQPASTQEAVLTCTSAAPAPSIA
VATSAVATTSLTVKKPVSASLTVTASPVIKPVLVSASATASLQTVKAVPASPVVTASLRP
AASVLTTTTATSGQTAIQTVKPVFTSAVVTSSLQSAKPALVSTAASSATTPLQPLKPVIG
TPISIKISQPNSIVAQPVGAQQVVKVKQLVVQQPSGTVVKQVSTLPQPSTLTLQTPAEKR
MPLNAFVQTNQFPAGSILKQITLPGNKILSLQASPVQKAEIKENGATSLSRDEDDINDVT
SMAGVNLNEETACILATNSELIGTVIRSCADEPFLSLEVLQKKILNIGKRHDIMELNSDV
ANLISHATQERLRGLLEKLTVAAQHRVSTHKGSDRYVVSSDTRAQLRFLEKLDHLEKQRK
DEEEREILLRAAKSRSSKEDPETLRLKQKAKEMQQLELAQMQQREANLTALAAIGPRKKR
PLDSSNVGSGLEDLKGNGIAPGSSGFSLTKQLLCPRITRICLRDLIFCMEQEREMKHSLT
LYRALLK
NT seq
2544 nt
NT seq
+upstream
nt +downstream
nt
atgagcgccccggtggcggcggcggcggcccccgtcacgctgatgcccggcgggcacccg
gagcaggcggccgccgcgggcccggcgcccgacccgggcggccccgtcgccaaggtgccc
ggcggcccgccgacccccgctgccccccaaccgccgccaccaccaccgcgcccggcggca
gtccccgcggggaccccgaaggcgcgggtggccgcctccggggccccgcggccggtggcg
cctaaggggccgcccacggccaccctccagttaccggccaacttccagctgcccccagga
actgttcttatcagaagcagtaatggccaactaatgctagtatctcaacaagcaatagca
cgagcacaaagtcagccacaaaatcagccacaaaataacacgagtgtgagaccgtctctg
ccgaccagcacacccacaatcaaaatatgtgccgtacagaattctggcacccagttacta
aagaaagtagcagctactcctgtgaaaccattagctcaaacaacaaatgctgtggcttct
actgttcagacacctgctgtaatacagccagcagctgcaccagctagtgttactacagtt
actgctgtaaagccttcgagtactggaacacctgtaaaacttccagttacaggaccacct
gcacaagctatctcccaaaaggcagtctctgtgaaagcagagggcacaacagtagcacag
accagcatttctacagagacgctagagaatgtgaagaaatgcaagaattttcttgctaca
ctaataaaactggcatctagtggatctcaagcccctgagatggggcagaatgtgaagaat
ctggtgcaaaatctgctggaagcaaaaattgagccagaagagtttacaaaaaaactatac
acagagctcaagtcatctccacaaccgtatttagttccttttctcaagaaaagcatgctt
gccttacggcagctaatgcctaacgctcagagctttatccagcagtgtatgcagcagcca
gcttcaacccaggaagctgttttgacttgtacctctgcagcaccagctccgtcgatagca
gtggcaacctcagctgtagcaacaacttctcttacagttaaaaaaccagtgtctgcctct
ctaacagtcacagcctctccagttataaaaccagttcttgtcagtgcatcggcgacagct
tctctgcagaccgtgaaggctgttcctgcctctccagtggtgacagcatctcttcggcct
gcagcttcagtcctcaccacaacaacggcaacatcagggcagacggctatccagactgtc
aagccagtcttcacctctgcagtagtaacatcctctctccagtctgcaaagccagcgctt
gtctctacagcggcatcttcagcaacaacccctctccagcctctgaaaccagtcattgga
accccaatcagtattaaaatctcccagccaaactccatcgttgcacagccagtgggtgct
cagcaggtggttaaagtgaaacagttggtagtccagcaaccatcaggaactgttgtaaag
caagtgtccacactcccgcaaccctcgacgctgaccctacagacacctgctgagaaaagg
atgccgctgaatgcattcgttcaaactaaccagtttcctgcaggttccattctaaaacaa
attaccctgccaggaaataaaattctgtcgcttcaagcatctcctgttcagaaagctgaa
ataaaagagaacggagcaacatccttaagtagagatgaagatgacataaatgatgtgact
tctatggctggggtcaatcttaacgaggagactgcgtgcattttggcaacaaactctgag
ctcattggtacagtgatccggtcgtgtgcagatgaaccttttctctccttggaagtgctt
cagaagaagatcttgaacataggtaaaaggcatgacattatggaacttaactctgatgtt
gcgaacttgatctcccatgctacacaggagagattacgagggctgctagaaaaactaact
gtagctgctcagcacagagtatcaacccacaaggggagtgataggtacgttgtatctagt
gacaccagagcacagctgagatttctggaaaagcttgatcacctagaaaaacagagaaag
gatgaagaggaacgtgaaatattgcttcgagcagccaagagccgctccagtaaagaagat
ccagagactctgcggttaaagcagaaagcaaaagagatgcagcaattggagttagcacaa
atgcaacaaagagaagctaacctcacagctttggcagccattggaccaaggaagaaaaga
ccattggattcatcaaacgttggatctgggttagaggatttgaaaggcaatggaattgct
cctggatcatcaggttttagccttacgaaacagctgctctgtccaagaataactcgcatc
tgtctcagggacttgatattctgcatggaacaagagagggagatgaagcattctctaacc
ttgtaccgtgctcttctgaagtga
DBGET
integrated database retrieval system
