Phalacrocorax aristotelis (European shag): 142053367
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Entry
142053367 CDS
T11493
Name
(RefSeq) desmoglein-4-like
KO
K07599
desmoglein 4
Organism
parx Phalacrocorax aristotelis (European shag)
Pathway
parx04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
parx00001
]
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
142053367
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
parx04515
]
142053367
Cell adhesion molecules [BR:
parx04515
]
Cadherins
Major cadherins
142053367
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_FAT4_N
CADH_Y-type_LIR
Cadherin_2
RET_CLD1
Fibulin_C
Motif
Other DBs
NCBI-GeneID:
142053367
NCBI-ProteinID:
XP_074941018
LinkDB
All DBs
Position
2:119940960..119965464
Genome browser
AA seq
1185 aa
AA seq
DB search
MDWLPHRMAAFLFLLLVLLDFSTGFHVEVKEWNENGTTKWKTFRRQKREWIKFAAACREG
EDNSKRNPIARIRSDCEENNPITYSISGVGIDRAPYGIFVINPRTGEINITAIVDREVTP
IFVIRCFAKHSVTGVDLEPPLELRVRVLDINDNPPVFAQAVFTGSIEESSMDNTLVMKII
ASDADEPNHLNSKIAFKIESQEPSGPPMFIMNKYTGELHIANFLDREQHSSYTLVVKASD
RDGAADGISSLCSCVVKVIDVNDNFPTLAQSSFSASIAENALSSEVLRIQALDADEENTP
NWRAKFVILSGNENHWFKIDTDPNTNEGIVRVVKELNYEQHQVHPLTIGVINENSFHKSV
AHSFQMSGTPLTIAVKNVVEPPYFHPSSIVFSLSESTRVNYIVGAYTAIDEDTGAIASNV
VYSMGRDPGAWFRVNQNTGEITLNKVIDRESIYVTNGQYRAEVLAITRGVPQYTATGTIV
LSIQDVNDNCPTINTELRKVCMHSPSVIITAKDMDGDPYGPPFTFSIHGEPQTTWIIRSI
NASSAELVCQNIDFYMYRIYISVKDNQGRSCPKPHIIPVQACQCDSRNYCTNGATKITII
GGGGRGTDVSGDAGSSGGAAGGGGAGGVGGGGGGVGGGGVGGGGVGGGGVGGGGGNGDIG
PGVDQTEDHTDGQVYTYGYGDEGYTPATDDIYNGNLGRQAPSSTTLSGAAIGLMFLGGLI
FVLIPILMSMSDCCGCGPGAAGGVGTGFEPVPECTEGAIHPWGIEGAQPEDRDVSHILAP
TTAAGGDFGEPSDIYTNTYGGGGVVASGVEETTGVGYGTGTGYGTAGGISGTGEVKGSVG
GTIKEYREGGVNMAFLDNYFSEKAFVYADEDEGRPANDCLLIYDHEGVGTPVGSVGCCSF
IGEDTDETYLDTLGPKFKTLAEICLGKEIEPFPDVNPPWPSVNVTFPSPESDLNLPPPGT
TIIVNGSAPMPPPVGTTTVVTENTYTSASTIQPPRPMPDPLLHGNMTVTETYTSGSPSLG
VDPLRASNVVVTERVVGPASASDLRGMLDIPDLTDGSNVIVTERVIAPNSRLPTSLSIPD
LVDGSNVVVTERVFRPASGMPGSLINIPSELSNTHNVVVTERVVSGSGMNSLGGASLGGA
NLGGLSSTSQMLSADCHLGQAMGTASPGTSRRRVTKYSTVQYSSQ
NT seq
3558 nt
NT seq
+upstream
nt +downstream
nt
atggattggctccctcaccgaatggctgcttttctgttccttttattggtgctcttggat
ttcagcacaggatttcatgtagaggtaaaagaatggaatgaaaatggaacaacgaaatgg
aaaaccttcagaagacaaaaacgcgaatggatcaaatttgctgcagcctgtagagaagga
gaagataattctaagagaaatccaattgccagaatccgatcagactgtgaagaaaacaat
ccaatcacatacagcatctctggagttggaattgatcgggctccctacggaatatttgtt
attaacccaagaacaggagaaattaatataacggcaatagtggatagggaagtaacccca
atatttgttatacgttgctttgctaaacactcagtgacgggtgtagatttggaaccacct
cttgaacttcgagtcagagttctggatataaatgataaccctcctgtatttgcacaagct
gtatttacaggatctattgaagaaagcagtatggacaacacactggtgatgaaaataatt
gcatcagatgcagatgaacctaatcacttgaattcaaaaattgccttcaagatagagagt
caggaaccttcaggtccacccatgtttattatgaacaaatatactggagaactccatatt
gcaaattttcttgacagagagcaacatagtagctacactcttgttgtgaaggcatcagac
cgggatggagctgcagatggaatatcatccctttgtagctgtgttgttaaagttattgat
gtcaatgacaacttcccaactcttgctcaaagctctttttcagcaagtattgcagaaaat
gcactcagttcagaagtgctacgtatacaagctctggatgctgatgaagagaatacaccc
aattggagagcaaaatttgtaattttatctggtaatgaaaaccactggtttaaaattgat
accgaccccaacacaaatgaaggaatcgttcgagtagttaaggaactgaattacgaacaa
caccaagttcacccactgactattggtgtcatcaacgaaaattccttccacaagtctgtt
gcgcattccttccaaatgtctggaacgcccctcacaatagcagtaaaaaatgtggttgaa
ccaccatattttcatccatcttcaattgtgttttctctatcagaaagcacaagagtgaat
tatattgtgggagcatacacagccattgatgaagataccggagctattgcatcaaatgtc
gtgtatagtatgggtcgtgatccaggtgcctggttcagagtcaaccaaaacactggtgaa
attacactgaacaaagttattgaccgggaatcaatctatgtaaccaatgggcagtacaga
gcagaggttctggctatcaccagaggtgttcctcaatatactgctactggtaccattgtg
ctttcaatacaagacgtcaatgacaattgcccaactattaatactgagttaaggaaagta
tgtatgcattccccatcagtgattatcacagcaaaggatatggatggtgatccatatggt
cccccctttacattcagcatacatggtgaacctcaaactacatggattatcagatcaata
aatgcttcctccgcagaactagtgtgtcagaacattgacttttacatgtacaggatctat
atcagtgtaaaagataaccaaggccgaagctgccctaaaccacatattattcctgtgcaa
gcttgtcagtgtgatagtcgtaattactgcaccaatggggccacaaaaataactatcatc
ggtggtggtggcagaggcactgatgttagtggtgatgctggcagtagtggaggagcagca
ggaggtggtggtgctggtggtgttggtggtggtggtggtggtgttggtggtggcggtgtt
ggtggtggcggtgttggtggtggcggtgttggtggtggtggtggtaatggtgatattggg
cctggtgtagaccaaactgaggaccacacagacgggcaggtttacacttatggatatggt
gatgaaggatatactccagccactgatgatatttataatggaaatttgggcagacaggcc
ccatcttctaccacacttagcggtgctgccattggcctgatgtttctcggtggattaata
tttgttttgattccaattttgatgtcaatgagtgactgttgtggatgtggacctggcgct
gcaggtggagttggaactggatttgaacctgtacctgaatgcacagaaggggcaattcat
ccatggggaatagaaggtgcacagcctgaagacagggatgtctcacatattcttgcccca
acaacagctgcaggaggtgattttggtgaaccctctgacatatatacaaacacatatgga
ggaggcggagtagtagcttctggtgttgaagaaactacaggggttggctatggcactggt
actggttacggaacagctggaggaatttctggaacaggagaagtgaaagggtcagttgga
ggaacaataaaagagtatcgagaaggaggggttaacatggccttcctagacaactacttc
tctgagaaagcatttgtgtatgcagatgaagatgaaggtcggccggcaaatgactgctta
ttaatatatgatcatgaaggtgtcggtactcctgttggctctgtgggttgctgcagcttt
attggagaagatacagatgaaacatatttggatacattaggaccaaaatttaagaccctg
gcagagatctgtctgggcaaagagattgaacctttccctgatgtcaacccaccctggcca
agcgttaacgtcacctttcccagccctgaaagtgatctaaacctcccaccacctggaacc
accatcattgtcaatggaagtgcacctatgcctcccccagtcggcaccacaacggttgtt
actgaaaacacctacacatctgcgtcaaccatacagcctccaaggccgatgccagatcct
ttgctccacggcaacatgacagtgactgagacctacacctccggctccccctctcttggt
gttgaccctctgcgtgcatccaacgttgttgtaacagaaagggttgtcggtcctgcatct
gcctctgatttgcgtggcatgctagatatccctgatctcacagacgggtccaatgttatt
gtcacagaaagagtaatcgcacctaactcccggcttccgacctctctaagcattcctgat
ttggtagatgggtcaaatgtggtagtgacagaaagggtgttcaggcctgcctctggcatg
ccaggcagcttaataaatattccctcggagttatcaaacacccacaatgtggtggtcacc
gagagggtagtgtcagggtctgggatgaacagcctgggtggggcaagcctaggaggggca
aatctggggggcctgagcagcacgagtcagatgctcagcgccgactgccaccttggccag
gcaatgggcacggcgtcccccggcacctcccggagaagagtgacaaagtacagcaccgtg
caatactccagtcagtaa
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