Phalacrocorax aristotelis (European shag): 142053397
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Entry
142053397 CDS
T11493
Symbol
RB1CC1
Name
(RefSeq) RB1-inducible coiled-coil protein 1 isoform X1
KO
K17589
RB1-inducible coiled-coil protein 1
Organism
parx Phalacrocorax aristotelis (European shag)
Pathway
parx04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
parx00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
142053397 (RB1CC1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
parx01009
]
142053397 (RB1CC1)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
parx04131
]
142053397 (RB1CC1)
03029 Mitochondrial biogenesis [BR:
parx03029
]
142053397 (RB1CC1)
Protein phosphatases and associated proteins [BR:
parx01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
142053397 (RB1CC1)
Membrane trafficking [BR:
parx04131
]
Autophagy
Autophagosome formation proteins
ULK complex
142053397 (RB1CC1)
Mitochondrial biogenesis [BR:
parx03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
142053397 (RB1CC1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ATG11
ATG17_like
TBK1_ULD
Lant_leader_dom
Motif
Other DBs
NCBI-GeneID:
142053397
NCBI-ProteinID:
XP_074941115
LinkDB
All DBs
Position
2:complement(124292649..124371297)
Genome browser
AA seq
1597 aa
AA seq
DB search
MKLYVFLVNTGTTLTFDTELAVQNVADLKHAIQTKYKIAIQHQVLVVNGGECMAPDRRVC
SYSAGTDTNPIFLFNKEMILCERPPAIPKTTFSAENEMELKVEESLMMPAVFHTVASRTQ
LAVEMYEVAKKLCSFCEGLVHDEHLQHQGWAAIMANLEDCTYSYQKLLFKFENVYSSYLQ
SIDDIKLKLTHLGSAVSIMAKIPLLECLTRHSYRECLGRLDSSAEHGGAESEETEDGKSA
ELVLYSDVSKANNKSVLASFCKSVEHSALESADPENVKDKESGQNTTVQDSETSVELKDD
DQPSFNVSLLDWINVQDRPNDVESLVRKCFDSMSRLDPRIIQPFLAECRQTIAKLDNQNM
KAIKGLEDRLYALDQMIASCSRLVNEQKELAQGFLANQKRAENLKDPSVLPDLCLSHANQ
LMIMLTNHRKLLDIKQKCTTAKQELANNLQVRLKWCCFVMLHADQDGEKLQALLRLVTEL
LERVKVVEALSTVPQMYCLAVVEVVRRKMFIKHYREWAGALIKDGKHLYEAEKAKRESFG
KLFRKSFLRNRLFRGLESWPPSFCTRKPRRFDSELPDISLSDLQFLQSFCPSEVQPLLRV
PILCDFEPLHQHVRALHNLVKAAQSLDEMSQTITDLLNEQKASNSQASPQSATTPRMEST
TGTAIATSSRTPPSLSLQGPLCPPVCLPAPLEELSPDSIDAQTFDFETIAHPNLEQALKQ
GSLDLDSLAESPESDFMSAVNEFVIEENPVSPNVISDPQSPEMMVESLYSSVINAIDSRR
MQDTNSCVKDVSVEKASVGVCVEKCRVIAQDSKVHLKGIKEDLCHFRTLVQREQCDFSNS
LKCTSLEIINTIEKVKLSLEKTLKDKHQKELQSLKSEYETKINKLLEDGEENKKKIKKLK
GDLLGLEEVLQNKNDEFAIVKNEKEAVVCLQNEKDQKLLELECQMETQNCEIKELRQSRE
TVLEDLKKLHVENKEKLQLLRAELESLEQSHLKELENNLQARHLQEFEKVLAEHKDCLDK
LQKENQHRLEQMQESHAVVVQEKQQQVEELQLKVSDLSDLRCKLEVELALKEAETDEMKL
LLEESRNQQQEALKSQIDKETENLKKEIDKLNNKIQTNTDEYQVGLSELRTLMTIEKDQC
ISELIERYEEESNLLRTELNKVTFLHQKTSEAEKRLSEQIAELQSKLELEANALEKEKTE
KLSLCEQQEKYEAVIRKLKEEKELLVSNQEQDRQLLIQKLNCEKEDAVQTACKEFELQRE
AAEKGLLEKIQQLEMQVNRSPPTESSAESSLVAELQEKLQEEKMKFLEQLEEQEKRKNEE
MQNIRTSLTAEQQTNFNTVLAREKMKKENIINDLSDKLKMLTQQQEKDKDLIETLSEDRA
RLLEEKKKLEEEVNKLRISNFSPSTYSAAASEACGACAADVLTDTDRLVSDIAAEGRMDS
TMETSMMAVHENVHMSEEKQRIMLLERTLQLKEEENKRLNQRLMSQSMSSVSSRHSEKIA
IRDFQVGDLVLIILDERHDNYVLFTVSPTLYFLHSESLAALDLKPGECASGASRRPWVLG
KVMEKEYCQAKKAQNRFKVPLGTKFYRVKAVPWNKKV
NT seq
4794 nt
NT seq
+upstream
nt +downstream
nt
atgaagctatatgtatttctggtcaacactggaactacccttacctttgatacggaactt
gctgtacaaaatgtggctgatctgaaacatgcaattcaaacaaagtacaagattgccatt
cagcaccaagtactggtagtcaatggaggagagtgtatggcaccagacagaagagtgtgt
agttacagtgctggaacagataccaacccaatttttttattcaacaaagaaatgatcttg
tgtgaacgtccaccagctatccccaaaaccacattttcagcagagaatgagatggaattg
aaagtagaagaatctctcatgatgcctgccgtgtttcatacggtagcatcacggacacaa
cttgctgtggaaatgtatgaggttgccaagaagctttgctccttttgtgaaggccttgta
catgatgaacatcttcagcatcaaggctgggctgccataatggccaacttggaagattgt
acatattcttaccaaaagctacttttcaagtttgaaaatgtatattcaagctatttgcag
tccatagatgatatcaagttgaaacttacacacttgggttctgctgtttctatcatggcc
aagataccactgctggagtgcctaacgagacatagttacagagagtgtttaggaagactg
gactcttcagctgagcatggaggggcagaaagtgaagaaactgaggatgggaaatctgct
gaattggtgctttattctgatgtatctaaagcgaacaataaatcagtgttagcctcattt
tgcaagtcagttgaacattcagctttggaaagtgcagatcccgaaaacgtaaaagataag
gaatctggtcaaaacactactgtccaggacagtgagacatcagtagaattgaaagatgat
gatcagccttccttcaatgtgtctttgctagactggataaatgttcaagatagacctaat
gatgttgaatcgctggtcagaaaatgttttgattctatgagcaggcttgatccaaggatc
atccagccctttctggcagaatgtcgacaaactatcgccaaactagataatcagaacatg
aaggctatcaaaggccttgaggataggctctacgcattggaccagatgatagcaagctgc
agcagactggtgaatgaacaaaaagaacttgctcagggatttttggctaatcagaagaga
gctgagaacttgaaagatccttctgtgctgcctgatttgtgtttgagtcatgcaaatcag
ctgatgattatgttaactaatcacagaaaactgttagatatcaaacagaaatgtacaact
gccaaacaggagcttgcaaataatctgcaagtcagactgaagtggtgttgttttgtaatg
cttcatgctgaccaagatggagagaagctacaagcattgcttcgtcttgtaacagagctc
ctagaaagggtcaaggttgtcgaggctctcagtactgttcctcagatgtactgcctagct
gttgttgaggttgtgaggagaaaaatgttcataaaacactacagggagtgggcaggtgct
ttaataaaagatgggaaacacctgtatgaagctgaaaaggcaaaaagggaatcttttgga
aaactgttcaggaagtcttttctaagaaatcgtttgtttagaggacttgaatcctggcct
ccatccttttgtacacgaaaacctcgcagatttgacagtgagcttccagatatctcatta
agtgacttgcagtttttgcagtcattttgtccttcagaagtacagccgttactcagggtt
cccatactttgtgactttgaacctcttcaccagcatgtacgtgctctacataacctggta
aaagcagcacagagtttggatgaaatgtcacaaaccattacagacctgctgaatgaacaa
aaggcctccaacagtcaagcatcgccacaatctgctactacaccaaggatggaaagtaca
acaggaaccgcaattgctacctcttcaagaactcctccatcactcagtcttcagggtccc
ctgtgtccgcctgtgtgtctcccagctccattagaagaactgtctccggacagcattgat
gctcaaacatttgattttgaaactattgcccatccgaacttggagcaagcgcttaagcaa
ggatcattagacttggattcattagcagaaagtccagaatctgactttatgtcagcagtc
aatgaattcgtaatagaagaaaatcccgtatctcctaatgtaataagtgatccacagagt
ccagaaatgatggtggaatctctttattcttcagtaatcaatgcaatagacagtagacgt
atgcaagatacaaattcttgtgtaaaggatgtttcagtagaaaaggcatctgtcggtgtt
tgcgtggagaagtgtagggttattgctcaagactcaaaggtacatttaaaaggtataaaa
gaagatctttgccactttagaacacttgtacaaagagaacagtgtgacttttctaattct
ttaaaatgcacttcattagaaataataaatactattgagaaggtaaaactttcacttgaa
aaaacactaaaagataaacatcaaaaagaattacagtctttgaaaagtgaatatgaaact
aaaattaataaattattggaggatggtgaagaaaataaaaagaagattaaaaagctaaaa
ggtgatttattaggccttgaggaagttcttcagaataagaatgatgaatttgcaatagtg
aaaaatgagaaagaagctgtagtttgccttcagaatgaaaaagaccagaaattacttgaa
ttggaatgccaaatggagacacaaaattgtgaaattaaggaactgagacagtcacgtgag
acagtacttgaagacttgaaaaagcttcacgttgaaaacaaggaaaaactacagctcctg
agggcagaacttgagagtttagagcaaagccatttaaaagaactggaaaacaacttacaa
gccaggcatttacaggagttcgagaaggtgctagctgagcacaaggactgtttagataaa
ttacaaaaagagaaccagcatagacttgaacaaatgcaggaatctcatgcagtagttgtg
caagagaaacaacaacaagtagaagagttacaactcaaggtttcagatctgtctgattta
aggtgcaaattagaagttgaacttgccctgaaagaggcagaaactgatgaaatgaagctt
cttttggaagaaagcagaaaccagcaacaagaggccttaaaatctcagattgataaggaa
actgaaaacttaaagaaggagatagataaattaaacaataaaatacaaactaacactgat
gaatatcaagtgggcttatcggaactaaggactctaatgacaattgagaaagaccagtgc
atttctgagctaatagaaagatatgaagaagaatcaaatttgcttagaactgaactaaat
aaagtaacgtttcttcatcaaaaaacttctgaggcagaaaaaagactttcagagcaaata
gcggaactacaaagtaagttagaattggaagcgaatgccctagaaaaggaaaaaacagaa
aaattgtctctctgtgagcagcaggaaaaatatgaagctgttatccgtaagcttaaggaa
gagaaagaactgttagtatctaaccaagaacaagacaggcagttgctcattcagaagctc
aattgtgaaaaagaggatgcagtgcaaactgcttgtaaagagtttgaattacagagggaa
gctgctgaaaaagggcttttggaaaaaatacaacaacttgagatgcaagtaaatcggagt
cctcccactgaatcatctgctgaatcaagcttggttgctgaacttcaggagaaacttcag
gaagaaaaaatgaagttcttagagcaacttgaagaacaagagaaaagaaagaatgaagaa
atgcagaatatcagaacatcgctcacagcagaacagcagaccaactttaacactgttctg
gcaagagagaaaatgaaaaaagaaaacataattaatgatcttagtgacaagttaaaaatg
cttacacaacagcaagaaaaagataaggatttgattgaaacactttctgaagatcgagct
cgcttacttgaagagaagaagaagcttgaagaagaagttaataaactgagaataagtaat
ttttctccatcaacctactcagcggcagcttcagaagcttgtggagcctgcgcagctgat
gttctcactgacacagacagattggtttctgacattgcagctgaagggaggatggactcc
acgatggaaaccagtatgatggctgtgcatgaaaatgtccatatgtctgaagaaaaacag
aggataatgttgttagaaagaactttgcagttgaaagaagaggaaaataagagattaaat
caaagattgatgtcccagagcatgtcatcagtatcctcaagacattctgaaaaaatagct
attagagattttcaggttggcgatttggttcttattatcttggacgaaaggcatgacaac
tatgtattgtttactgtcagtccaaccttgtatttcttgcattcagaatctcttgctgca
ctggatctcaaaccaggtgagtgtgcttcaggtgcatctaggagaccttgggttctagga
aaagtgatggaaaaggaatattgccaggcaaaaaaggcacaaaacagatttaaagttccg
ttgggtacaaaattctacagagtgaaagcagtaccatggaacaagaaagtataa
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integrated database retrieval system
