Phalacrocorax aristotelis (European shag): 142053590
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Entry
142053590 CDS
T11493
Symbol
SUPT20H
Name
(RefSeq) transcription factor SPT20 homolog isoform X1
KO
K21245
transcription factor SPT20 homolog
Organism
parx Phalacrocorax aristotelis (European shag)
Pathway
parx04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
parx00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
142053590 (SUPT20H)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
parx03036
]
142053590 (SUPT20H)
Chromosome and associated proteins [BR:
parx03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
142053590 (SUPT20H)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spt20_SEP
Motif
Other DBs
NCBI-GeneID:
142053590
NCBI-ProteinID:
XP_074941541
LinkDB
All DBs
Position
1:complement(27727734..27763577)
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AA seq
829 aa
AA seq
DB search
MQQALELALDRAEYIIESARQRPPKRKYLSSGRKSVFQKLYDLYIEECEKEPEIKCAAFL
YLKVEKSKNQNNNFGSSLKHKCGNRPGLWTGRIYARQKLRRNVNLLEKLVMQETLSCLVV
NLYPGNEGYSLMLRGKNGSDSETIRLPYEEGELLEYLDAEELPPILVDLLEKSQVNIFHC
GCVIAEIRDYRQSGNMKSPTYQSKHILLRPTMQTLICDVHSITSDNHKWTQEDKLLLESQ
LILATAEPLCLDPSIAVTCTTNRLLYNKQKMNTRPMKRCFKRYSRSSLNRQQEVAHYSTP
PQLRLLDYLQKRKERKGAQQYDLKISKAGNCVDMWKQNPCYLTAPSEVDVEKYAKVEKSI
KPDDSQPTVWPAHEIKDDYVFECEVGNQLQKTKLTIFQTLGNPLYYGKIQTLKGDEENDN
LLSPSQFLIGSKTDAERVVNQYQELVQNEAKCPVKMFHNSGGSVNLSHLSPGKEMEQPES
ISGSVQSSVLGKGVKHRPPPIKLPSSSGSSSSGNIFSPQQSSGHLKSPTPPPLPSKPPGL
SRKQSMDLNAVSMLSPAAMSPASSSQRSGTPKPSTPTPTNTPSSTPHPPDAQSSTPITPS
ATPTPQDSGFTPQPTLLTPFAQQQMSLSQALPVMTIPLSTMVTSVTTGTTSTQVMANPAG
LNFINVVGSVCGAQTLMSGSNPMLGCNTGAIAPAGINLGGILPSGGLVPSALPAAMQSAS
QAGSPFGLKNASNLRPLNLLQGSDQGPANQDQSLSAQQAAVINLTGVGNFMQPQATVLSQ
LGSAMNRPGQSLPQQRLQLSSALQQQQQQALQQQQQQIQVIQQLHPDCV
NT seq
2490 nt
NT seq
+upstream
nt +downstream
nt
atgcaacaagctttagaactggcattggatcgtgcagagtatatcattgaaagtgcccgt
cagagacctcccaaacgaaaatatttatccagtggaagaaaatctgtatttcaaaaactc
tatgatttatatatagaagaatgtgaaaaagagcctgagataaagtgtgcagcattcctg
tacttgaaagttgaaaaaagtaaaaatcaaaacaataattttggaagcagtcttaaacac
aaatgtggaaacagacctggtctgtggactggaaggatctatgctcggcagaagctgagg
cgaaatgtgaatttacttgagaagctggttatgcaggagacgttgtcatgtctggtagtg
aacctctatccaggaaatgagggttattcacttatgctcaggggaaaaaatggttcagat
tctgagaccattcggctgccttatgaggaaggagagctgcttgaatatttggatgcagag
gagctgccacctattttggttgatcttttagaaaaatctcaggttaatatatttcattgt
ggatgtgtcatagcagaaatacgtgactataggcagtctggtaacatgaaatctccaacg
taccaaagcaagcacattcttttgcgtcctacaatgcaaactttaatttgtgatgtgcat
tctataacaagtgacaaccacaaatggacacaggaggacaaactcctacttgagagccaa
cttattttggctacagcagagcctttgtgtcttgatccttcaatagcagtgacctgtact
acaaacagactcctgtacaacaagcagaagatgaatactcgcccaatgaaacggtgcttc
aaaaggtactcacggtcatctctgaacagacagcaggaagtagctcactattcaactcca
cctcagctcagactacttgactacttacagaaaagaaaggagaggaaaggagcccagcag
tatgacctcaaaatttctaaagctggaaattgcgtagatatgtggaaacagaacccttgc
tatttgactgcaccttctgaagtggatgtggaaaaatatgccaaagtggaaaagtctatc
aagcctgatgactcacaaccaaccgtctggccagcccatgaaataaaagatgattatgtg
tttgaatgtgaagttggtaatcagcttcaaaaaacaaaactgaccatttttcagactctt
ggcaatcccttgtactatggtaaaatacagacactcaaaggtgatgaggaaaatgacaac
ctattaagtccatcacagttccttattggctcaaagactgatgctgaaagagtggtgaac
cagtatcaggaattggtgcaaaatgaagcaaaatgtcctgtgaaaatgtttcataattca
ggtggatcagtcaatcttagtcatctttctccagggaaggaaatggaacagccagaaagt
atatcaggctctgttcagtcttcagtattggggaaaggtgtaaaacaccgacctcctccc
atcaaattaccttcaagttcaggaagtagctcttcaggtaatatttttagtccgcaacag
tcaagtggccatctaaaatccccaactcctcctcctcttccttctaagcctcctggtctt
tctcggaaacaatctatggatcttaatgcagttagcatgctctctccagctgccatgtct
cctgcgagctcttcacaaaggtctggaactcctaaaccatctactcctactccaaccaac
accccttcatcgaccccacaccctcctgatgctcagagctcaactcctattaccccttct
gccacccctactccccaagattcaggcttcacccctcagcccactttgttaaccccattt
gctcagcagcaaatgtctctgagccaggcattgcctgtaatgaccattcctctttccacc
atggtaacatccgttactacaggaacaacctccacccaggtcatggcaaaccctgcagga
cttaacttcatcaatgtagtgggctctgtgtgtggagcacagacactgatgagtggttca
aaccctatgttggggtgcaacactggtgccatagcccctgcaggtataaatctgggtggc
attttaccatcaggaggtctggtaccaagtgcgctgcccgctgcaatgcagtctgcctct
caagcaggcagcccctttggtttgaaaaatgcatcaaatcttcggcccttaaatcttcta
caggggtctgaccaaggtccagccaatcaagatcagtcattatctgcccaacaagctgct
gtaattaacctgactggagtagggaattttatgcaacctcaagccacagtgttgtctcag
cttggctctgccatgaacagacctgggcaaagccttcctcagcagagactccagctctct
tctgccttacaacagcagcaacaacaagccttgcagcagcagcagcaacagatacaagta
atccagcaacttcaccctgactgtgtttaa
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