Phalacrocorax aristotelis (European shag): 142053806
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Entry
142053806 CDS
T11493
Symbol
TOP1MT
Name
(RefSeq) DNA topoisomerase I, mitochondrial isoform X1
KO
K03163
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
parx Phalacrocorax aristotelis (European shag)
Brite
KEGG Orthology (KO) [BR:
parx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
parx03032
]
142053806 (TOP1MT)
Enzymes [BR:
parx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
142053806 (TOP1MT)
DNA replication proteins [BR:
parx03032
]
Eukaryotic type
DNA Topoisomerases
142053806 (TOP1MT)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Topoisom_I
Topoisom_I_N
Topo_C_assoc
DUF641
DUF6937
Motif
Other DBs
NCBI-GeneID:
142053806
NCBI-ProteinID:
XP_074942045
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All DBs
Position
2:complement(166709748..166740375)
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AA seq
805 aa
AA seq
DB search
MDVAITTMREAEEEDLDPTDPLQQGCAQDLKRKREKKQEQRKQQEKGLLRKGGSKKDEFE
ESPEDVMEGMEEEEGADWGRNQAVGWGRAKRGSSSTQGQGDGRQKQKGKAEKRKKVKTEG
EEKMGKKKKIKKEKILEEEQELEKTDEEAGENGVGDELEGRDRMGKESGDGKGVKEEEEE
VDGKGDERWGETQSAEIGQEVEEEAGKGDVSGKEKKQKIKEKKSEGEMKEKGKKSEDEET
LGKTRKRKSKEGGEKNNKKAKKEEKEEEKKEAENKWKWWEEEKKEDGVKWTQLEHRGPYF
APLYEPLPDDVQFYYDGKPLKLSLATEEIATFYAKMLDHEYTTKEIFQNNFFNDWRKEMT
SKEQKIIKDLDKCDFREIHKYFVEKSEARKALSKEEKQKLKEEADKIQEEYGYCILDGHR
EKIGNFKTEPPGLFRGRGDHPKMGMLKKRIMPEDVIINCSKDSKIPEPPEGHKWKEVRFD
NTVTWLASWTENIQNTLKYIMLNPSSKLKGEKDWQKYEVARRLKDVVHKIRAQYRTDWKS
KEMKKRQRAVALYFIDKLALRAGNEKEEGETADTVGCCSLRVEHITLHPKLDGQDHVVEF
DFLGKDSIRYYNKVSVEKPVFKNLQLFMKNKDPADDLFDRLNTSILNRHLQSLMDGLTAK
VFRTYNASITLQEQLKALTNSEDNVAGKLLSYNRANRAVAILCNHQRSTPKTFEKSMQNL
QTKIDAKKQQVEEAQQELKKAEDEFEDTQNDKAKANVEKKKKLLKRLEEQLAKLNVQATD
KEENKQIALGTSKLNYLDPRISIAW
NT seq
2418 nt
NT seq
+upstream
nt +downstream
nt
atggatgtggccatcaccactatgagggaggctgaggaggaggatctggaccccactgac
ccgctgcagcaagggtgtgcccaagacctgaaaaggaaaagagagaagaagcaagagcaa
aggaagcagcaggaaaagggtttgctgagaaaaggagggagcaagaaggatgaatttgag
gaaagccctgaggatgtgatggagggcatggaggaggaagagggtgctgattggggcagg
aatcaggcagtgggatggggcagagccaagcgagggagcagcagcacccagggacagggt
gatgggaggcaaaagcagaaggggaaagcagagaagcgcaagaaggtgaaaacagagggg
gaggagaagatggggaagaagaagaaaataaagaaagaaaaaattttggaagaggagcaa
gagctggagaagacagatgaggaagcaggagagaatggagtgggagatgaactggagggg
agagacaggatgggaaaggaaagtggagatgggaaaggagtgaaggaggaggaagaggag
gtggatgggaaaggggatgaaagatggggagagacccagagtgcagagattgggcaggag
gtggaggaggaggcagggaagggagatgtgtcagggaaagagaaaaagcagaaaatcaag
gaaaaaaagtcagagggggaaatgaaagagaaggggaaaaagagtgaagatgaggagacc
ctggggaagacccggaaaaggaaatctaaagaaggaggagaaaagaacaacaaaaaggct
aaaaaggaggagaaagaggaagaaaagaaagaggcagaaaacaagtggaaatggtgggaa
gaggagaagaaagaagatggggtaaagtggacgcagctggaacacagaggaccctatttc
gcccccctctacgagccgctgcctgatgatgtgcagttttattatgacggcaaacccctg
aagctgagcctggcaacggaggaaattgctaccttctacgccaaaatgcttgaccatgaa
tacacgaccaaggagatcttccagaacaacttcttcaatgactggaggaaggagatgaca
tcaaaggagcagaagataatcaaggacctggacaagtgtgacttcagggagatccacaag
tactttgtggaaaaaagtgaggcacggaaagcactctccaaagaggagaagcagaaactg
aaggaggaggcagacaagatccaggaggagtatgggtactgcatcctggatgggcaccgg
gagaagataggtaacttcaaaactgagccgccagggctgttccgtggacgtggtgaccac
cccaaaatgggcatgctgaagaagaggatcatgccagaagatgttatcatcaactgcagc
aaggactccaagatccccgagccaccagaagggcacaagtggaaggaggtgcgctttgac
aacacggttacctggctggcctcatggacggaaaacatccagaacactttgaagtacatc
atgctgaaccccagctccaagctgaagggggagaaagactggcagaagtatgaggtagcc
cggcgcttaaaggatgttgtccacaaaatccgtgctcagtacagaactgattggaagtcc
aaggagatgaagaagcggcaaagagcagtggccctctacttcattgataagctggccctg
cgagctggcaatgagaaagaggaaggggagactgcggacacagttggctgctgttccctg
cgtgtggagcacataacgctgcaccccaagctggatgggcaggatcacgtggtggagttt
gacttccttgggaaagactcgatccgttactacaacaaagtgtcagtggagaagccggtg
ttcaagaacctgcagctgttcatgaagaacaaggacccagcagatgacctctttgacagg
cttaatacatccatcttgaacagacacctccagagtctgatggatggtttgactgccaaa
gtgttcaggacctacaatgcctccatcaccctgcaggagcagctcaaggcactcactaac
tctgaagacaatgttgcaggaaaactcctctcctacaaccgagctaacagagctgtggcc
atcctgtgcaaccatcagaggtctacaccgaaaacctttgagaagtcgatgcaaaacctc
cagaccaagatcgatgccaagaagcaacaagtggaagaagcccagcaagagctgaaaaaa
gccgaagatgagttcgaagatacacaaaatgacaaagcaaaagccaatgtggagaagaaa
aagaagctgttgaagcggctggaagagcagctggccaagctgaatgttcaggccacagac
aaggaggagaacaagcagatagctctgggcacgtccaagctgaattacctggaccccagg
attagcatagcctggtaa
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