KEGG   Phalacrocorax aristotelis (European shag): 142054276
Entry
142054276         CDS       T11493                                 
Symbol
CDC5L
Name
(RefSeq) cell division cycle 5-like protein
  KO
K12860  pre-mRNA-splicing factor CDC5/CEF1
Organism
parx  Phalacrocorax aristotelis (European shag)
Pathway
parx03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:parx00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    142054276 (CDC5L)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:parx03041]
    142054276 (CDC5L)
   03400 DNA repair and recombination proteins [BR:parx03400]
    142054276 (CDC5L)
Spliceosome [BR:parx03041]
 Complex B
  Other components
   Prp19 complex
    142054276 (CDC5L)
 Complex C
   Prp19-CDC5 complex
    142054276 (CDC5L)
DNA repair and recombination proteins [BR:parx03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   PSO4 complex
    142054276 (CDC5L)
SSDB
Motif
Pfam: Myb_Cef Myb_DNA-binding Myb_DNA-bind_6 TPR_HPS5_insect Rap1_C
Other DBs
NCBI-GeneID: 142054276
NCBI-ProteinID: XP_074942719
LinkDB
Position
3:5804937..5840699
AA seq 803 aa
MPRIMIKGGVWRNTEDEILKAAVMKYGKNQWSRIASLLHRKSAKQCKARWYEWLDPSIKK
TEWSREEEEKLLHLAKLMPTQWRTIAPIIGRTAAQCLEHYEFLLDKAAQRDNEEETADDP
RKLKPGEIDPNPETKPARPDPIDMDEDELEMLSEARARLANTQGKKAKRKAREKQLEEAR
RLAALQKRRELRAAGIEIQKKRKKKRGVDYNAEIPFEKKPAPGFYDTSEENYQSLDADFR
KLRQQDLDGELRSEREGRERKKDKQHMKRKKESDLPSAILQTSGVSEFTKKRSKLVLPAP
QISDTELEEVVKVGQASEIARQTAEESGITNSASSTLLSEYNVTNNSIALRTPKTPAAQD
RILQEAQNLMALTNVDTPLKGGLNTPLHESDFSGVTPQKQVVQTPNTVLSTPFRTPSHGP
EGLTPRGGLTPKPVVGTTPGRTPLRDKLNINPEEGMADYSDPSYAKQMERESREHLRLGL
MALPAPKNDFEIVLPENAEKELEENEVDETFVEDTADIDARKQALRDAERAKELKRMHKA
VQKNLPRPSEVNETILRPLNVEPPLTDLQKSEELIKKEMITMLHFDLLHHPFGEQPSGKK
GKGPGFGSNNAEHMAYLEQNPYEKFSKEDLKKAQDLLAQEMEVVKQGMGHGELSSEAYNQ
VWEECYSQVLYLPGQSRYTRANLASKKDRIESLEKRLEINRGHMTTEAKRAAKMEKKLKI
LLGGYQSRAMGLIKQLNDLWDQIEQAHLELRTFEELKKHEDAAIPRRLECLKEDVQRQQE
REKELQQRFADFMLDKETFQAKY
NT seq 2412 nt   +upstreamnt  +downstreamnt
atgccgcggattatgataaaaggcggcgtgtggcggaacaccgaggatgaaattctgaag
gcggctgtgatgaaatatggcaaaaaccagtggtctcgtattgcttctttattacataga
aaatcagcaaagcagtgcaaagccagatggtatgaatggctagacccaagcatcaaaaag
acagagtggtcacgggaagaagaggagaagctgttgcacctggccaagctaatgccaacc
cagtggagaaccattgccccgatcattgggagaactgctgcacagtgtttggaacactat
gaatttctgctggacaaagctgctcagagagacaatgaagaagaaactgctgacgatcct
cggaaacttaaaccgggagaaattgatccaaatccagaaaccaaaccagccaggcccgat
cctattgacatggatgaagatgaacttgaaatgctgtctgaggctagagctcgtctggct
aatacacaggggaagaaggccaaaagaaaagcaagagagaaacagctggaagaagctaga
cggcttgctgctctccagaagagaagagaacttcgggctgctggaattgaaatccagaaa
aagagaaaaaagaagaggggtgttgattataatgcagaaattccttttgaaaagaagcct
gcccctggtttttatgatacatcagaggaaaactaccagtccctggatgcagattttagg
aagctacgtcagcaagacctggatggagaattaagatctgaaagggagggaagagagcgc
aaaaaagacaaacaacatatgaaacgaaaaaaggagtcagacttgccttcagctattcta
cagaccagtggagtgtcagaatttaccaaaaaaagaagtaaactagtgcttccagctcct
cagatatctgatacagaacttgaagaagttgtaaaagtaggccaagcaagtgagattgca
cgccagactgctgaggaatctggaattacaaactcagcttccagcacccttctgtctgaa
tataatgtgaccaacaacagcatagctctaaggactcccaaaacaccggcagcacaggac
aggatcctgcaggaagcacagaatttgatggctctcacaaatgtggatacccccctgaaa
ggaggtcttaacactcccttgcatgaaagtgacttttcgggggtaacaccacagaagcag
gttgttcagactccaaacactgtgctttccacgcccttcagaacaccttctcatggacca
gaaggcttaactcctcgtggaggactaactcctaaacctgtggttggtacaactcctggt
agaactccactgcgtgataaattgaacatcaacccagaagaaggaatggccgattacagt
gacccatcttatgcaaaacaaatggagagggagtctcgtgaacacctgcgccttggactc
atggcccttcctgctccaaagaacgactttgagattgttttacctgaaaatgcagaaaaa
gaacttgaggagaacgaagtagatgaaacctttgtagaagatactgctgatatagatgcc
cgcaagcaggctctccgagatgcagagcgtgcgaaggaactgaagagaatgcacaaagct
gttcagaagaatctaccacggccctcagaagttaatgaaacaatactgagacccttaaat
gtggaaccacctctaacagacttgcagaaaagcgaagagctaataaagaaagagatgatt
accatgcttcattttgatcttttacaccacccatttggagaacagcctagtggtaagaag
ggaaaaggcccaggatttggaagcaacaatgcagaacatatggcttacttggaacaaaat
ccttatgagaagttctccaaagaggatctcaagaaggcacaggatctactggcacaagag
atggaagtggtaaagcaaggaatggggcatggagagctctcaagtgaagcttataaccag
gtgtgggaagaatgctacagccaagtgttatacctgcctggacagagccgctacacaaga
gctaacttggccagcaaaaaagacaggatagagtcacttgaaaagaggcttgagataaac
agaggccacatgacaactgaagcaaagagggctgccaagatggagaagaagctgaagatc
ttgcttggtggttatcagtctcgagcaatgggcctcatcaaacaattgaatgatttgtgg
gaccaaatcgaacaggcacatctggagctacgtacttttgaggaactgaagaaacatgaa
gatgctgcaatccctcggaggctggagtgtctgaaggaagacgtgcagcggcagcaggag
agagaaaaggagctccagcagagatttgctgacttcatgttggataaagagacttttcaa
gcaaagtattaa

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