KEGG   Phalacrocorax aristotelis (European shag): 142054309
Entry
142054309         CDS       T11493                                 
Symbol
SF3B6
Name
(RefSeq) splicing factor 3B subunit 6
  KO
K12833  pre-mRNA branch site protein p14
Organism
parx  Phalacrocorax aristotelis (European shag)
Pathway
parx03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:parx00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    142054309 (SF3B6)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:parx03041]
    142054309 (SF3B6)
Spliceosome [BR:parx03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    142054309 (SF3B6)
 Complex B
    142054309 (SF3B6)
 Complex C
   U2 SnRNP specific factors
    142054309 (SF3B6)
SSDB
Motif
Pfam: RRM_1 RRM_5 RRM_7
Other DBs
NCBI-GeneID: 142054309
NCBI-ProteinID: XP_074942808
LinkDB
Position
3:8278392..8283815
AA seq 125 aa
MAMQAAKRANIRLPPEVNRILYIRNLPYKITAEEMYDIFGKYGPIRQIRVGNTPETRGTA
YVVYEDIFDAKNACDHLSGFNVCNRYLVVLYYNANRAFQKMDTKKKEEQLKLLKEKYGIN
TDPPK
NT seq 378 nt   +upstreamnt  +downstreamnt
atggcgatgcaagcggccaagcgagccaacattcggctgcctccagaagtcaatcggatc
ctgtatattaggaatctgccatataaaatcacagcggaggaaatgtacgatatttttggg
aaatatgggcctattcgacaaatcagagtcgggaacactcctgagactagaggaacagcc
tacgtagtctatgaagacatctttgatgccaaaaatgcttgtgatcacctgtcaggattc
aacgtgtgcaacagatacctcgtcgttttgtactataatgcaaacagggcattccaaaag
atggacacaaagaagaaagaggaacagcttaagcttctcaaggaaaaatatggaattaat
acagacccaccaaaataa

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