Phalacrocorax aristotelis (European shag): 142054335
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Entry
142054335 CDS
T11493
Symbol
GEN1
Name
(RefSeq) flap endonuclease GEN homolog 1
KO
K15338
holliday junction resolvase GEN1/YEN1 [EC:3.1.-.-]
Organism
parx Phalacrocorax aristotelis (European shag)
Brite
KEGG Orthology (KO) [BR:
parx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
parx03400
]
142054335 (GEN1)
DNA repair and recombination proteins [BR:
parx03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
142054335 (GEN1)
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
XPG_I
Chromo_2
XPG_N
A2L_zn_ribbon
Chromo_SEND1
Motif
Other DBs
NCBI-GeneID:
142054335
NCBI-ProteinID:
XP_074942857
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All DBs
Position
3:complement(12710552..12732650)
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AA seq
953 aa
AA seq
DB search
MGVTNLWQILEPVRQPVNLSSLKGKTLAVDLSLWVCEAQTVKKMIGVVTKPHLRNLFFRF
AFLTSMGIKLVFVMEGEAPKLKADTMSKRNEMRYGSSMKVGTAKTGRSLFKAILKECLDL
LDCLGVPWVQAAGEAEAMCAYLNAKGHVDGCITNDGDVFLYGAQTVYRNFAMKAKDPLLD
CYTMSSIKEKLGCDRESLIGLAVLLGCDYLPKGIPGVGKEQALKLIEALRGQNLLQRFEQ
WKEQFQYDNNPPLVVKRVIHCSECHHPGSYKEHEHSGCKFCESTRYCKPNDSKHGCPCEW
HHLERKKQASAVEDSIRKKANSCEGFPFSEVIQEFLVNKNKLIKIKECQRPNLLSFQIFA
SEKMEWTKHYACKKLLALLTHYDMVQRKSGYIDAKQLQATRIIKTRVKNGIPCFEIEWQK
PEHYVDAEDEPAELFVVTVEEESLFQAAYPDVVALYQVGKSEFLKKKQKNRKDRPKEKEL
PNVYDEVSDLLSQMNLKSRCGIFPVQYSTSDIKTPPEDQIHQRSTESKDLVLAAASCITT
VQMPASAAALTLTASPYLLLQSTLADSSVLPAQFTENAGTSSSSSVTAGLQLSSTDWGGA
FFSTSPARGGDIHDPAADLTTAIKHSHPPGHETGRKSSEYSDDLQSDQHRSDSADGLVSD
GDMEQLQKWSLSEQILKKTSIPSKPKDVMQLESLKCFKQTKETLNPDKDYVSSLCQLNKI
VQESKNVLSENYARESSICIYQGQYKKADNLAEMMHKDHNISSSTSVALSGQTTGALHPG
CEVLPVSQKPADVVTGCHIRKARTQTTWKTSCKKSVCQNRCSSSEDSDDGNTNKNLIYEW
QKRQLNPGQFKKAFTKKSSNIVTRKKTNSDSALIIKETKKKTNSKQAGNSFSLQVSSKPS
SAGEVNCSQSPEQPFGSSGSGPTQEAKNAVLTYAGTDSPLPLSERLKGRIKIS
NT seq
2862 nt
NT seq
+upstream
nt +downstream
nt
atgggggtgactaatctgtggcaaatccttgagcccgtgagacaacctgtcaacttgagc
agtctcaaaggaaaaacgcttgctgttgatttaagtctgtgggtttgtgaagcacagact
gttaaaaagatgattggagtagttaccaagccacatctgagaaacctgttttttcggttc
gccttcttaacatcaatgggaattaaactagtgtttgtcatggaaggagaggcccccaag
ttgaaggcagacaccatgagtaagaggaatgagatgcgctatggatcttcaatgaaagtt
ggaactgcaaaaacagggagatctttatttaaagcaattttaaaagagtgtcttgatctg
ctggattgtttaggtgtcccttgggttcaagcagctggggaagcagaggcaatgtgtgcc
tacctaaatgccaaaggacatgttgatggctgcattaccaatgatggagatgtcttctta
tatggagctcaaacagtttataggaactttgccatgaaagctaaggatccacttcttgac
tgttatacaatgtcctctattaaggagaagcttggctgtgatagagaatctttgattggg
ctagctgttcttctgggttgtgattatcttccaaagggcattccaggagttgggaaggaa
caagctttaaagttaattgaggctctcagaggtcaaaacttattgcaaaggtttgagcaa
tggaaagaacaatttcagtatgataataatccacctttggttgttaaaagggtaattcac
tgttctgagtgccatcatccaggatcttacaaggaacatgagcacagtggatgtaaattc
tgtgaaagcactagatactgcaaacccaatgactccaaacacggctgcccttgtgaatgg
catcacttggagcgaaagaaacaagcaagtgcagtggaggacagtatcagaaaaaaagct
aacagttgtgagggctttccattctctgaggttatccaagaatttcttgtaaacaagaat
aaattgatcaagataaaagaatgccaaaggccaaatttattgtcctttcagatatttgct
tccgagaagatggaatggaccaaacattatgcttgtaagaaactattagcactattgaca
cattatgatatggtccagagaaaatctggatacattgatgcaaaacagctgcaggcaaca
cggataatcaaaacacgtgttaaaaatggaattccttgttttgagattgagtggcaaaaa
ccagaacattatgttgatgcagaagatgagcctgcagagttgtttgtagtcacagtagaa
gaggagtctttgtttcaggctgcttatcctgatgttgttgccctttatcaagtaggaaag
tcagaatttctgaagaagaaacagaaaaacaggaaagacagaccaaaagaaaaggaattg
ccaaatgtttatgatgaagttagcgatcttctgtctcaaatgaatttaaaatctagatgt
ggaatttttcctgtgcagtactctacatcagatataaaaactcccccagaagatcagata
caccagagaagcactgaatcaaaagacctagtgttagctgcagcgtcctgcataacaact
gttcaaatgccagcatcagcagctgctcttactctgactgcatcaccttacttgctctta
cagagtacgctggctgactcatctgtattgccagcacaatttactgaaaatgcagggacg
tcatcctcttcctctgtaacagctggtctacaactgagcagtactgactggggaggagcc
ttcttcagcacttcaccagcccgtgggggtgatatccatgatccagcagctgacttaact
acagccataaaacactcgcatccaccgggtcatgaaacaggaagaaaaagctcagagtat
tctgacgatctacagtctgatcagcatcgttctgatagcgcagatggtctggtttcagac
ggtgatatggaacaacttcagaagtggtctttaagtgagcaaatacttaagaagacttcc
attccatcaaagcctaaagatgtaatgcaactggagtctttgaaatgttttaaacaaaca
aaagaaacattgaatcctgataaagattatgtctcttccttatgtcagttaaataaaata
gtgcaggaaagtaaaaatgtgctatcagaaaactatgcaagggaatccagcatatgcatt
tatcaaggtcagtataaaaaagctgacaacctggctgaaatgatgcacaaagaccacaat
ataagcagttcaacatctgtagccctcagtgggcaaacaacaggggcactgcatcctggg
tgcgaagtgcttccagtgtctcaaaagccagcagatgtggtaactggctgtcacattaga
aaagctcgtacacaaactacttggaagacttcttgtaaaaagagcgtgtgtcagaacaga
tgttcgtctagtgaagacagtgatgatgggaacacgaataaaaatctgatttatgagtgg
cagaaaaggcagctgaaccctggtcagtttaaaaaagcttttacaaagaaaagcagtaac
attgttactagaaaaaaaacaaacagtgactcagcccttataattaaagagacgaagaaa
aagaccaattcaaaacaagctggtaatagtttctcattgcaagtttcttcaaaaccatcc
tctgcaggggaagttaattgttcccaaagtccagagcaaccatttggtagctcaggttct
ggtcccacgcaggaagccaaaaatgctgttctgacttacgcagggacagacagtcccctc
cccctgtctgaaagactaaaaggaagaatcaaaatcagttag
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