Phalacrocorax aristotelis (European shag): 142054654
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Entry
142054654 CDS
T11493
Symbol
LAMA4
Name
(RefSeq) laminin subunit alpha-4
KO
K06241
laminin, alpha 4
Organism
parx Phalacrocorax aristotelis (European shag)
Pathway
parx04510
Focal adhesion
parx04512
ECM-receptor interaction
parx04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
parx00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
142054654 (LAMA4)
04518 Integrin signaling
142054654 (LAMA4)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
142054654 (LAMA4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_G_2
Laminin_G_1
Laminin_I
Laminin_II
EGF_laminin
EGF_LMN_ATRN
Laminin_G_3
GBP_PSP
Motif
Other DBs
NCBI-GeneID:
142054654
NCBI-ProteinID:
XP_074943563
LinkDB
All DBs
Position
3:complement(52525639..52628555)
Genome browser
AA seq
1827 aa
AA seq
DB search
MALISAWPLVSPILFFLRCFSSSTASSEGSVFQFDIEGSSAVSVQEATVIRGQQQAVATG
SWVTFAEGCQDGFYRTSSGKCSPCNCNGNADRCLDGSGICVDCQRNTTGQHCEKCPDGFI
GDVVRGVPTFCQPCPCPLPALANFAVSCYRKGGSVRCVCKENYAGPNCERCAPGYYGNPL
LIGSSCKKCDCSGNSDPNLIFEDCDEVTGQCRNCLHNTTGFKCERCAPGYYGDARFAKNC
TECNCGGRMCDSQTGECLADSPEVSPGTDCPTISCDKCIWDLTDDIRLAVLAIDESKSTL
LSISTGVAAQKRLNDLNLTATHLQEAMSKKQNHAVLWTIQVDDAADEMNDLLREAATLDE
QGNEASSKGLLVQKETMETNNRATQLVQQLSNMRDNIQEISSKMKYYAIQQELSPEEIAQ
KLSMAEEMLKEIKRRKPFANQKQLADEEENAAEELLQQVEEFHERYNDTRSLVSDVVEQL
SEQDVKLSDLEEALDQALGYVMQTEGINKENTANLQRHEKQHEKIKEQIDEVNSILLNAT
TILAGPQKVNSELSEVIKNVSGFYAEIDGAKKELQEKLANLSLFDDDLVEKAMHHAHNLR
RLADELDRNLYGVDTNGLVQRAINASNVYENIADYIEEASKAALLALNTTNRVNDAAVGI
DTQIIYHKGKSEELLKRATELQQTADDSNDLTIADTSQHVNGTLARMNALRSQLMRAITK
VQSAEQVEARERLEQAKEKSAEAISTAMAVTQATTPMDENARLWSQNLQDFQHSSAVYNS
AVHSAGDAVKKLTEVFPQLLDKLRRVEQKAPANNISSSIQRIRGLIAQTRSVASKVQVSM
TFGGQSAVEVNPKINVEELKSFTSMSLYIKLQKDNPQLAASPDRFILYLGNKNAKNYIGL
AIKNDNLVYIYNLGGQDVEIPLDAKPVSTWPSYFSIIKIERIGRHGKMFLTVPSLSSAAE
EKFIKKGEVLGPGSLLNLEPENTVFYVGGVPPDFKLPPSLNLPGFIGCLELATLNDDVIS
LYNFKHIYNIDTTTSPPCARNKLAFTQSRAVSYFFDGSGYALARNIERRGRFSQVTRFDI
EVRTPTDNGLILLMINGSMFFSLEMHNGFLYLRYDFGFSTGPVLLEDSMKKAQINDAKFH
EISIIYHNSKKMILVVDRRHIKSVDNERTAMPFTDIYIGGAPAEILHSSISSHLAGSIGF
KGCMKGFQFQKKDFNLLEEPGTLGISYGCPEDSLMSRKAYFNGESFIASSQKVSLFSEFE
GGFNFRTLQPNGLLFYSSEGSDVLSISMDRGAVVLNASGNKIQSPERNYNDGKTHFIIVS
VTPERYELTVDDKKQSKKNPAKDRAGKSSDSVKKFYFGGSPLRTQQANFTGCISNAYITR
LDRDVEVEDFQQYSEKVQTSLYGCPVESPPVALLHKKGKNSSKAKGNRNKKVGRDKDKIS
EPSTGLKKLYQEVNMQRDPQCHLPMNPKATEHAYQFGGTANSRQEFDHIPKDFSERAQFS
ISLKTYSSHGMIFYVSDQKETNFMALFVAHGRLIFMFNAGHQKIRIKSQEKYNDGLWHNV
IFIRDKNIGRLIIDGLRVLEEPFGSNANTWQVTEPLYIGGVAPGKAVKNIQINSVYSFSG
CLSNLQLNGRSITSASQTFSVTPCFEGPSEAGTYFSSEGGYVVLDESFSLGLKFEIVFEI
RPRSSSGILLHGHSVNGEYLNMHMRNGQVTVKLNNGIRDFSTSVTLKQSLCDGRWHRIAV
IRDANVVQLDVDSEVNHVVGPLNPKATDHREPVFIGGVPESLLTSRLTTRSSFIGCIRNF
MIDEKPVSFSKAALVSGAVSINTCPAA
NT seq
5484 nt
NT seq
+upstream
nt +downstream
nt
atggctttgatctccgcctggcccctcgtttctcctatattattctttttgagatgcttc
tcgtccagcacagcctcgagtgagggaagtgtttttcagtttgacattgaaggtagctca
gcggtcagcgtgcaagaagccactgttatcagagggcagcagcaggcagtagctactgga
agttgggtgacttttgctgaggggtgccaagatggattttaccgtaccagctcaggaaaa
tgctctccttgcaactgtaatggtaatgcagacagatgccttgatggatctggaatctgt
gtggactgccaaagaaacacaacaggacaacactgcgagaaatgtccggacggcttcatt
ggtgacgttgtcagaggagtgcccacgttctgccagccctgcccctgccccctgccagca
cttgccaactttgcagtctcctgttacagaaaaggtggaagtgtgcgctgtgtctgtaag
gaaaactatgcagggcccaactgtgaaaggtgtgcccccggttactatgggaaccccttg
ttaattggaagcagttgtaaaaaatgtgactgcagtggcaactcagacccaaacctgatt
tttgaagactgtgatgaagtgaccggccagtgccgcaactgcctgcacaacaccaccggg
ttcaagtgcgaacgatgcgctccaggttactatggggatgccagattcgctaaaaactgt
acagaatgtaactgtggagggagaatgtgtgacagccagactggagaatgcctcgcagac
agtcctgaagtttctcctggcacggactgcccaaccatcagctgtgataaatgtatctgg
gatttgacagatgacatccgattagcagttctggctatcgatgaaagcaaatcgacttta
ctgagcatttctacaggtgttgcagctcaaaagcgcttgaatgacctgaaccttactgcc
acccatctccaggaggcaatgtccaaaaaacagaaccatgctgtgctttggaccatccag
gttgatgatgctgcagatgaaatgaatgatctcctgagagaggcagcgacacttgatgaa
cagggaaatgaagcatccagcaaaggcctactggtacagaaggaaaccatggagaccaac
aaccgtgctactcagcttgtgcagcagctcagtaatatgagggataacattcaagaaatc
agcagcaagatgaaatactatgcaattcaacaagagctgagccctgaagaaattgcccag
aagctgagtatggctgaggagatgctgaaggagatcaaacgccgtaagcctttcgctaat
cagaagcaacttgcagatgaggaggaaaacgcagcggaggagttgctacagcaagttgaa
gagtttcacgagaggtacaatgacaccagatctctagtatctgatgtggtggagcagctc
agcgaacaggacgtgaagctgtcagacctggaggaagcattagaccaggcgcttggctat
gttatgcaaacggagggtataaataaggaaaacacagccaatcttcaaaggcatgagaaa
caacatgagaaaataaaagagcaaatagatgaagtgaacagcattctgctaaatgccaca
actattttggcaggaccacaaaaggtcaactctgagttaagtgaggtaataaagaatgtg
tcagggttctacgcagaaatagatggagcgaaaaaggaattgcaagaaaaactagccaat
ctgtctctgtttgatgatgatttggtagaaaaggctatgcatcatgcacacaacctaaga
agactggctgatgagctggaccggaatttgtatggtgttgatacaaatgggttggtacaa
agggcaataaatgcttcaaacgtgtatgaaaacattgctgattatattgaagaagccagt
aaagctgcattgctggcactgaacacaacaaaccgggtcaatgatgctgcagttggtatt
gatactcagatcatttaccataaaggtaaaagcgaagaactcctcaagcgagccacagag
ctacaacagacagcagatgacagtaacgatttaactattgcagacactagccagcatgtt
aatggcactcttgccagaatgaatgctctgcgaagccaactgatgagagccatcaccaaa
gtgcaatcagcagagcaagtggaggccagagaacgtttggagcaagctaaagagaagtct
gcagaggccataagtactgccatggcagtaacacaggctacgacccccatggatgagaac
gcgaggttgtggtctcagaacctgcaggatttccagcacagttcagcggtgtacaacagt
gctgtacattcagctggggatgcagtgaagaaacttacagaagtcttccctcaactcctg
gacaaactgcgcagagtagaacagaaggcaccagcaaacaatatttcttccagcattcag
cggatcagagggttaattgctcaaaccaggagtgtagcaagcaaggtccaagtttctatg
acgtttggaggccaatcagctgttgaagtcaatccaaagatcaacgtggaggaactgaaa
tctttcacttccatgagcttgtacataaagcttcagaaagacaacccacaactagcagca
tctccagacagatttattttgtaccttggaaacaaaaatgcaaaaaattacattggtctt
gcaattaaaaatgacaaccttgtgtacatttataatttggggggccaagatgtggagata
cctctggacgccaagccagtcagcacttggccttcttacttcagcatcatcaaaattgag
aggattggaagacatggcaaaatgtttttaactgtgcctagtcttagcagcgcagctgaa
gagaaattcatcaaaaagggagaggttcttggtcctggctctctcctgaatttggaacct
gaaaatactgttttctacgttggtggagtccctccagacttcaagctccctcctagctta
aacctacctggcttcatcggctgcctggaactggctaccctgaacgatgatgtcatcagc
ctgtacaacttcaagcacatctataacatcgacaccaccacatcgccaccttgtgccaga
aataagttggctttcactcagagccgggctgtgagctatttctttgatggctctggctat
gccttggcaagaaacattgagagaaggggaagatttagccaggtgactcgatttgacata
gaagttcgaacacctacagacaatggattgatcctgttgatgattaatgggagtatgttc
ttcagtctagagatgcacaatggtttcttgtaccttcgctatgactttggcttcagcacc
ggccctgtgctgctggaggactctatgaagaaggctcagattaacgacgctaaatttcat
gagatttctattatatatcataattctaagaagatgatcttggtagtagacaggagacat
ataaaaagcgtggacaacgaaagaacagccatgccattcacagacatctacattggagga
gcacctgctgagatcttgcactccagcattagctctcatctggcaggaagcattggtttt
aaaggctgcatgaaggggttccagttccaaaagaaggatttcaacttgttagaagaacca
ggaaccctgggaatcagctatgggtgcccagaggattcactgatgtcccgcaaagcatat
ttcaatggagagagcttcattgcgtcaagccaaaaagtgtccctcttcagtgaatttgaa
ggaggctttaatttccggacattgcagcccaatgggctgctcttctactcttctgaagga
tcagatgtattatccatctctatggacagaggtgctgtagttttaaatgcaagtggaaac
aaaattcagtcaccagaacgaaattacaacgatggaaaaacccatttcatcattgtttct
gtcaccccagaaagatacgagctgactgttgatgacaagaagcaaagcaagaagaaccca
gcaaaggacagagcagggaaaagctcggacagcgtcaagaagttttattttggtggttct
cccctcagaacacagcaagccaacttcactggctgcataagcaacgcttacatcactagg
ttggatcgagatgttgaagtggaggatttccagcagtactctgagaaagttcagacttct
ttgtatggatgccctgtggaatctcctccggttgctcttcttcataagaaaggaaaaaac
tcttcaaaagccaaaggaaaccgtaataaaaaggtgggaagagataaagacaagatttca
gagccttcaactggcctcaaaaaattgtatcaagaagtgaatatgcaaagagacccccag
tgccacttgcccatgaatcccaaggcaaccgaacatgcgtatcagtttggaggaacagca
aacagccggcaggaatttgatcacataccaaaggatttcagtgaaagagctcagttctct
atcagtctgaaaacttactcatctcatggaatgattttctacgtctcggatcaaaaagag
accaacttcatggcccttttcgttgctcatggccgactcatttttatgtttaatgctggt
catcagaagataaggattaagagccaagagaaatacaatgatggtctttggcacaacgtg
atatttattagggacaaaaatatcggtcgcttgataattgatggtctccgagtactggaa
gaaccttttggcagtaatgcaaacacgtggcaagtcactgaaccactctatattgggggt
gtagctccaggaaaagctgtaaaaaatatccagattaactctgtctacagttttagtggt
tgtctcagcaatttacagctcaatggaagatcaattacttcagcttcgcagacatttagc
gtaacaccttgctttgaaggcccatcagaagcaggaacatacttttcttcagaaggagga
tatgtcgtccttgatgaatccttcagtttaggcctgaaatttgaaattgtttttgaaata
cgtccccgaagcagctcaggaattctactgcatggtcacagcgtgaacggagagtacttg
aacatgcacatgagaaatgggcaggttactgtgaaactgaataatggaatcagggatttt
tcaacttcagtgacactgaaacagagtctctgcgatggcaggtggcaccgaattgcagtt
attagagatgctaatgtggtgcagctggatgtagactctgaagtcaaccatgtggtaggg
ccactaaatccaaaggcaactgaccacagggagccagtgtttattggaggtgtgccagag
tctctgctaacatccaggctgactacacgcagctccttcattggctgtattcgtaacttc
atgattgatgaaaaaccagtgagttttagtaaagcagctttggttagtggtgctgtaagc
atcaacacgtgtccagcagcctaa
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integrated database retrieval system
