KEGG   Phalacrocorax aristotelis (European shag): 142054659
Entry
142054659         CDS       T11493                                 
Symbol
HDAC2
Name
(RefSeq) histone deacetylase 2
  KO
K06067  histone deacetylase 1/2 [EC:3.5.1.98]
Organism
parx  Phalacrocorax aristotelis (European shag)
Pathway
parx03082  ATP-dependent chromatin remodeling
parx03083  Polycomb repressive complex
parx04110  Cell cycle
parx04330  Notch signaling pathway
parx04350  TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:parx00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    142054659 (HDAC2)
   03083 Polycomb repressive complex
    142054659 (HDAC2)
 09130 Environmental Information Processing
  09132 Signal transduction
   04330 Notch signaling pathway
    142054659 (HDAC2)
   04350 TGF-beta signaling pathway
    142054659 (HDAC2)
 09140 Cellular Processes
  09143 Cell growth and death
   04110 Cell cycle
    142054659 (HDAC2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:parx03036]
    142054659 (HDAC2)
Enzymes [BR:parx01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     142054659 (HDAC2)
Chromosome and associated proteins [BR:parx03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class I HDACs
     142054659 (HDAC2)
   HDAC complexes
    Sin3A-HDAC complex
     142054659 (HDAC2)
    BRAF-HDAC complex
     142054659 (HDAC2)
    REST complex
     142054659 (HDAC2)
    SHIP complex
     142054659 (HDAC2)
    MiDAC complex
     142054659 (HDAC2)
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     142054659 (HDAC2)
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    142054659 (HDAC2)
  Chromatin remodeling factors
   NuRD complex
    142054659 (HDAC2)
SSDB
Motif
Pfam: Hist_deacetyl
Other DBs
NCBI-GeneID: 142054659
NCBI-ProteinID: XP_074943577
LinkDB
Position
3:complement(53563868..53587762)
AA seq 488 aa
MAYSQGGGKKKVCYYYDGDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKA
TAEEMTKYHSDEYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVA
GAVKLNRQQTDMAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHH
GDGVEEAFYTTDRVMTVSFHKYGEYFPGTGDLRDIGAGKGKYYAVNFPMRDGIDDESYGQ
IFKPIISKVMEMYQPSAVVLQCGADSLSGDRLGCFNLTVKGHAKCVEVVKTFNLPLLMLG
GGGYTIRNVARCWTYETAVALDCEIPNELPYNDYFEYFGPDFKLHISPSNMTNQNTPEYM
EKIKQRLFENLRMLPHAPGVQMQAIPEDAVHEDSGDEDGEDPDKRISIRASDKRIACDEE
FSDSEDEGEGGRRNVADHKKGAKKARIEEDKKETEDKKADVKEEDKSKDSSGEKTDAKGA
KSEQLSNP
NT seq 1467 nt   +upstreamnt  +downstreamnt
atggcgtacagtcagggcggcggcaagaagaaagtctgctactattatgacggtgatatc
ggaaactattactatggacaagggcatccaatgaaacctcataggatccgaatgacccac
aacttgctgctaaattatggcttgtacagaaaaatggaaatttaccgaccccacaaagcc
actgctgaggaaatgaccaagtaccatagtgatgaatacatcaaatttctccgatcaata
aggcctgacaatatgtctgagtacagcaagcaaatgcagagatttaatgttggagaagat
tgtcctgtatttgatggcctgtttgagttttgtcagctgtcaactggaggatctgttgcc
ggggcggtaaaattgaacagacaacagacagacatggctgttaattgggctggaggactt
caccatgccaagaaatcagaggcatctggtttctgttatgtcaatgatatcgtgcttgcc
atccttgagttactgaagtatcaccaaagagtgttgtatattgatattgatatccatcac
ggtgatggcgttgaagaagcattttataccacagatcgtgtcatgacagtatcattccat
aagtatggtgaatattttccgggcacaggggaccttagggacatcggtgctggaaaaggc
aaatactatgctgtcaactttccaatgagggacggtatagatgatgaatcgtatggacag
atattcaaaccaattatatccaaagtaatggagatgtaccagcccagtgctgtggtatta
cagtgtggagcagattcactgtctggtgacaggctgggatgctttaatcttactgttaaa
ggtcatgctaaatgtgtggaagttgtaaagacttttaacttaccattgctgatgttagga
ggaggaggatatactattcgtaatgttgctcgatgctggacatatgaaactgctgttgcc
ttagattgtgaaattcctaatgagttgccatacaatgactacttcgagtattttggacca
gacttcaagcttcatattagtccttcaaatatgactaaccagaatacaccagaatatatg
gaaaagatcaagcaacgcttatttgaaaacttgcgcatgttacctcatgcacctggcgta
cagatgcaggccattcctgaagatgctgttcatgaagatagtggagatgaggatggagaa
gatccagacaaacgcatttctattcgagcatctgacaagcgcatagcctgtgatgaagaa
ttttcagattctgaagatgaaggggaaggtggacgacgaaatgtcgcagatcataagaaa
ggagcaaagaaagccaggatagaggaagacaaaaaagagacagaggacaaaaaagcagat
gttaaggaggaggataaatccaaggacagcagtggtgaaaagacagacgccaaaggagca
aaatcagaacagctcagcaatccttga

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