Phalacrocorax aristotelis (European shag): 142054741
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Entry
142054741 CDS
T11493
Symbol
TBPL1
Name
(RefSeq) TATA box-binding protein-like 1
KO
K03120
transcription initiation factor TFIID TATA-box-binding protein
Organism
parx Phalacrocorax aristotelis (European shag)
Pathway
parx03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
parx00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
142054741 (TBPL1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
parx03000
]
142054741 (TBPL1)
03021 Transcription machinery [BR:
parx03021
]
142054741 (TBPL1)
Transcription factors [BR:
parx03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
TATA-binding proteins
142054741 (TBPL1)
Transcription machinery [BR:
parx03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
142054741 (TBPL1)
RNA polymerase III system
TFIIIB
142054741 (TBPL1)
RNA polymerase I system
SL1/TIF-1B
142054741 (TBPL1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TBP
DUF3378
Motif
Other DBs
NCBI-GeneID:
142054741
NCBI-ProteinID:
XP_074943781
LinkDB
All DBs
Position
3:62994984..63008202
Genome browser
AA seq
183 aa
AA seq
DB search
MDADSDVALDILITNVVCVFRTRCHLNLRKIALEGANVIYKRDVGKVLMKLRKPRITATI
WSSGKVICTGATSEEEAKFGARRLARSLQKLGFQVIFTDFKVVNVLAVCNMPFEIRLPEF
TKNNRPHASYEPELHPAVCYRIKTLRATLQIFSTGSITVTGPNVKAVASAVEQIYPFVFE
SRK
NT seq
552 nt
NT seq
+upstream
nt +downstream
nt
atggatgcggacagtgatgttgcattggacattttaatcacaaacgtagtgtgtgttttt
agaacaagatgtcatttaaacttgagaaagattgcattagagggagcaaatgtgatatac
aagcgtgatgttgggaaagtactaatgaagcttaggaaacctaggattacggcaacaatt
tggtcctcaggaaaagttatttgcacaggagccacaagtgaagaagaagctaaatttggt
gccagacgattagctcgtagtctacagaaactaggttttcaggtaattttcacagatttt
aaagttgtgaatgttttagcagtgtgcaacatgccctttgagatcagattgccagaattt
acgaagaataacagacctcatgcgagttatgaaccggaacttcatcctgccgtgtgttac
agaataaaaactctcagagctaccttacagattttttccacaggcagtatcacagttaca
gggccaaacgtaaaggctgttgccagtgctgtggaacagatttacccattcgtgtttgaa
agcaggaaataa
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integrated database retrieval system
