KEGG   Phalacrocorax aristotelis (European shag): 142056118
Entry
142056118         CDS       T11493                                 
Symbol
HELQ
Name
(RefSeq) helicase POLQ-like isoform X1
  KO
K19178  POLQ-like helicase [EC:5.6.2.4]
Organism
parx  Phalacrocorax aristotelis (European shag)
Brite
KEGG Orthology (KO) [BR:parx00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:parx03400]
    142056118 (HELQ)
Enzymes [BR:parx01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     142056118 (HELQ)
DNA repair and recombination proteins [BR:parx03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   Helicases
    142056118 (HELQ)
SSDB
Motif
Pfam: POLQ_helical HTH_61 DEAD Helicase_C ResIII HHH_5 DUF7898 DNA_pol_lambd_f RIMB1_N DUF4332 DGKD_4H DUF3135 Cdd1 Sll0103_C
Other DBs
NCBI-GeneID: 142056118
NCBI-ProteinID: XP_074946496
LinkDB
Position
4:complement(15576371..15594052)
AA seq 1053 aa
MAEPSLAVRRKSRPGSVRKRSRAPLQPGPACSPVARKRASSGGEGQPVETPCSNDSEDDL
FGDYDSFYGSDSLLAQVDDIEHKYLQDKNMDIKAAGEIIPGNLQSGIHQKKQDNFSTSEN
MAVLKADKEDALQMNENEPVDNSQELTESILDDLPSSQLLYFEKMDELSSGSRISPDSER
RNKCVNSSSDKIRSLSSFCPDTEDRNRPTDFSSGSKCDLFKTESLKDHLKSAMTGNAKAQ
TLQVSKTKQLKEAVLSEEICVAKKTIESSSFDIGPFYGLPSKVKDLFRQFRGIETLYEWQ
HDCLMLESLQRRKNLIYSLPTSGGKTLVAEIIILQELLCRQKDVLMILPYVAIVQEKVRG
LSSFGIELGFLVEEYAGSKGRFPPIKRRIKKSLYIATIEKGHALVNSLIETERIDDLGLV
VVDELHMLGEGSRGATLEITLAKILYTSKNTQIIGMSATLNNVRDLQKFLQADYYTNNFR
PVELKEYIKIRDTIYTVDSKTEKGFTFSRLLNFKYSSNLEKADPDHIIALVTEVIPKYSC
LIFCPTKKNCENVASMVCKYLKKEFRAHKEKEKQDLMKNLKNIGNGSVCPVLKQTIPFGV
AYHHSGLTNDERKSIEEAYSTGVLCLLACTATLAAGVNLPARRVILRAPYVANDFLKKNQ
YKQMIGRAGRAGIDSAGESILIVQEKDKHLVQDLVNSPLDNCYSNLLLELNKGMQSLLLS
LVGLKIAVTHEEVDNFMCSTLLGVQQQLLSKGKSLSEIVKDGLENLAEKGLLKGRVSEKD
CNSKCTLTITPLGKATYKGSIDLAYCNLLYRELKKGLEGLILESNLHLLYLATPYDMTSN
CSPDWMIYLRQFNQLSAAEQKVADIVGVPESFITKKASGQAIRKNVDSAVVNRLYLSFVL
YTLLKETNIWSVSEKFNMSRGYVQNLLNAAASFASCVLHFCEELEEFWVYKALLTELTKQ
LTYCVKTELIPLMEVAGVLEARAKQLYNAGYKTLAHLANADPETLVRMIEHLSRRQAKQI
VSSAKMLLSEKAEALQEEVEELLKVPADIPGTY
NT seq 3162 nt   +upstreamnt  +downstreamnt
atggccgagcccagcctcgcggtgcggaggaagagccgtcccggctctgtccgcaagcgg
agccgggccccgctgcagcccggccccgcgtgctcgccggtggctcgcaagagagcgagt
tccggtggcgaggggcagccggtggagaccccgtgtagtaatgatagcgaagatgatctg
tttggtgactatgacagcttttatggaagtgactctttgctagctcaagttgatgatata
gagcacaaatacctgcaggataaaaatatggatattaaagcagctggagaaatcatacct
gggaatcttcagtcaggaattcaccagaaaaagcaagataatttttctacttcagaaaat
atggctgtccttaaagctgacaaagaggatgctttgcaaatgaatgaaaatgagccggtg
gataacagtcaagaactgactgaatctattttagatgacttgccatcatcacagcttttg
tattttgagaaaatggatgagctttcttctggttctagaatatctccagactcagaaaga
aggaataaatgtgtgaattcttcctcggacaaaatcaggagtctttcatctttttgtcct
gatactgaagacaggaacagacctactgacttttcctcaggctctaagtgtgatttattt
aaaactgagagtcttaaagaccatctgaaaagtgctatgactggaaatgccaaagcccag
actctgcaggtctctaagaccaagcagcttaaagaagctgttttatctgaagagatttgt
gttgctaagaaaactattgaatcatcttcttttgatataggccctttttatggattaccc
agcaaagttaaagatctgttcagacaatttcgagggatcgaaactctttatgaatggcag
catgattgcttaatgttggaatctctacaacgaagaaagaatttaatatactcattgcca
accagtggtggaaaaacacttgtagctgaaataataattcttcaagaattactctgcagg
caaaaagatgttctgatgatcctgccatatgttgccattgtccaagaaaaggttaggggt
ttatcaagttttggcatagaattgggtttcctggttgaagaatacgcaggaagtaaagga
agatttccaccaattaagaggagaattaaaaagtctctttatattgctactatagaaaaa
ggacatgctctggtgaattccttaattgagacagaaagaattgatgaccttggtctggtt
gtagtagatgagttgcatatgcttggtgagggaagtcgtggagcaacgctggaaattacg
cttgcgaaaattctttacactagtaaaaacacgcaaataattggaatgagtgcaacttta
aataatgtgcgagacctgcagaagttcctgcaagcggactactacactaataattttaga
ccggtagaattaaaggaatacataaagatacgagacaccatttacacagttgacagcaaa
acagaaaaaggctttactttttcacgtctccttaatttcaagtattctagtaatctggag
aaagcagaccctgaccacatcattgcactggttactgaagttattcctaaatattcctgc
ctaatcttttgtcccactaaaaagaactgtgaaaatgtggcttcaatggtgtgcaagtac
ctcaagaaagaatttagagctcacaaggagaaagagaaacaagatctcatgaagaaccta
aagaatattggaaatggaagtgtctgtcctgttctgaagcaaacaatcccttttggtgtt
gcctatcaccatagtggtcttacaaacgatgaaagaaaaagtatagaggaagcatattct
acaggtgtcctgtgtctacttgcttgcacagctactttggctgctggagtaaacctgcca
gctagaagagttattctcagagctccttatgttgctaatgacttcctgaagaagaaccag
tataaacaaatgattggcagagctggtcgagctggtattgacagtgctggagaaagtatt
ctcatagtgcaagaaaaagacaaacatttggttcaggatttagttaacagtcccttggac
aactgttacagcaatcttctgctggagttgaacaagggaatgcagagcctgttgttatct
ttggttggactgaagatagcagttacccatgaggaagtcgacaattttatgtgcagtaca
ttgctgggtgttcaacagcagctgctgtctaaagggaagagcctttcggagatagttaaa
gatgggttagaaaacctagcagaaaaaggactcctaaaaggaagagtatctgagaaggac
tgcaattccaaatgtacactaacgatcacaccattgggtaaagctacatataaagggtct
atagacttggcatactgcaatcttctttacagagaattgaagaaaggtttggaagggctg
attcttgagagcaatcttcatcttctatatctggcaactccatatgatatgacttctaac
tgcagcccagattggatgatatatttgaggcagttcaaccagctaagtgcagcagagcaa
aaagtagcagatattgtgggagtacctgaaagctttattacaaaaaaggcttctggtcaa
gccatcagaaagaacgtggacagtgctgtggtaaacaggctctatctgtcgtttgtcctt
tataccctactgaaagagaccaatatatggagtgtttcagagaaatttaatatgtcccga
ggatatgtgcaaaatctccttaatgctgctgcctcattcgcttcctgtgttctacacttc
tgtgaggaactggaagaattctgggtttataaagccttgctgacagaacttaccaaacag
ttgacatactgtgtcaagacagaactcatccctctgatggaggtagcaggggttctagag
gcacgagcaaaacagctttataatgcaggatacaaaactttagcacacttggctaatgca
gatccagaaactctggtcaggatgattgagcacctgtcacgacgtcaagccaagcaaatt
gtttcatctgcaaagatgctgctgagtgaaaaagctgaggctttacaagaggaagttgaa
gaactcttaaaggtacctgcagatatcccagggacctactga

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