Phalacrocorax aristotelis (European shag): 142056151
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Entry
142056151 CDS
T11493
Symbol
SMARCA5
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 isoform X1
KO
K11654
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [EC:5.6.2.-]
Organism
parx Phalacrocorax aristotelis (European shag)
Pathway
parx03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
parx00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
142056151 (SMARCA5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
parx03021
]
142056151 (SMARCA5)
03036 Chromosome and associated proteins [BR:
parx03036
]
142056151 (SMARCA5)
Transcription machinery [BR:
parx03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
NoRC (nucleolar remodeling complex)
142056151 (SMARCA5)
Chromosome and associated proteins [BR:
parx03036
]
Eukaryotic type
Chromatin remodeling factors
CHRAC complex
142056151 (SMARCA5)
RSF complex
142056151 (SMARCA5)
WICH complex
142056151 (SMARCA5)
B-WICH complex
142056151 (SMARCA5)
NORC complex
142056151 (SMARCA5)
BRF complex
142056151 (SMARCA5)
NuRF complex (fruit fly)
142056151 (SMARCA5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
SLIDE
HAND
Helicase_C
ResIII
DEAD
HDA2-3
Myb_DNA-binding
DBINO
AAA_14
Motif
Other DBs
NCBI-GeneID:
142056151
NCBI-ProteinID:
XP_074946591
LinkDB
All DBs
Position
4:complement(19277256..19302479)
Genome browser
AA seq
1094 aa
AA seq
DB search
MRDGAGGASPGRVGPRETMEGRVGAGAGPCRVPQAGRDGGGAGIRPGGGWGGCVGRGGGT
RTVGDSISPLPLAFDLRTRAPGAVFLRRPPPRGDGRPRCQESFDDASPGKQKEIQEADPT
YEEKMQTDRANRFEYLLKQTELFAHFIQPAAQKTPTSPLKMKPGRPRIKKDEKQNLLSVG
DYRHRRTEQEEDEELLTESSKATNVCTRFEESPSYVKWGKLRDYQVRGLNWLISLYENGI
NGILADEMGLGKTLQTISLLGYMKHYRNIPGPHMVLVPKSTLHNWMNEFKRWVPTLRAVC
LIGDKDQRAAFVRDVLLPGEWDVCVTSYEMLIKEKSVFKKFNWRYLVIDEAHRIKNEKSK
LSEIVREFKTTNRLLLTGTPLQNNLHELWALLNFLLPDVFNSSEDFDSWFDTNNCLGDQK
LVERLHMVLRPFLLRRIKADVEKSLPPKKEVKIYVGLSKMQREWYTRILMKDIDILNSAG
KLDKMRLLNILMQLRKCCNHPYLFDGAEPGPPYTTDMHLVTNSGKMVVLDKLLPKLKEQG
SRVLIFSQMTRVLDILEDYCMWRNYEYCRLDGQTPHDERQASINAYNEPGSSKFVFMLST
RAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQTKTVRVFRFITDNTVEERIVE
RAEMKLRLDSIVIQQGRLVDQNLNKLGKDEMLQMIRHGATHVFASKESEITDEDIDHILE
RGAKKTAEMNEKLSKMGESSLRNFTMDTESSVYNFEGEDYREKQKMAFTEWIEPPKRERK
ANYAVDAYFREALRVSEPKAPKAPRPPKQPNVQDFQFFPPRLFELLEKEILYYRKTIGYK
VPRNPDLPNAAQAQKEEQLKIDEAEPLNDEELEEKEKLLTQGFTNWNKRDFNQFIKANEK
WGRDDIENIAREVEGKTPEEVIEYSAVFWERCNELQDIEKIMAQIERGEARIQRRISIKK
ALDTKIGRYKAPFHQLRISYGTNKGKNYTEEEDRFLICMLHKLGFDKENVYDELRQCIRN
SPQFRFDWFLKSRTAMELQRRCNTLITLIERENMELEEKEKAEKKKRGPKPSSAQKRKMD
GTPDGRGRKKKLKL
NT seq
3285 nt
NT seq
+upstream
nt +downstream
nt
atgagggacggcgccggcggggcgtccccgggccgcgtggggccgcgtgagacaatggag
gggcgggtgggggcgggcgcggggccgtgccgtgtgccgcaggcggggagggacggcggc
ggggccgggatacggcccggcggcggctggggcgggtgtgtgggaaggggggggggcact
cggacggtaggggactccatctctccgcttcccctcgccttcgacctgcgcacacgggcc
ccgggtgctgtgttcctccgccggccgccgccacggggagacgggaggcctcgctgccag
gaatcttttgatgatgcatcaccaggaaaacaaaaagaaatccaggaagcagatcctaca
tacgaagagaaaatgcaaacagacagagcaaacagatttgagtatctgttgaagcagact
gagctgtttgctcatttcattcagcctgctgctcagaaaactccaacttcacctttgaaa
atgaagcctggacgtccacgaataaagaaggatgagaaacagaacttactgtcagttggc
gactaccgccatcgtagaacagaacaggaagaagatgaggagctgttaacagaaagctcc
aaggcaactaatgtctgcactcgatttgaagaatctccatcgtatgttaaatggggaaag
ctgcgtgattatcaggtccgaggattgaactggctcatctctttgtatgaaaatggcatc
aatggcatcctagcagatgaaatgggtcttggaaagacactgcaaacaatttctcttctc
gggtatatgaaacactacagaaatattcctggtcctcacatggtgttagttcctaagtcc
actctgcataactggatgaatgaattcaagagatgggtacctacacttcgagcagtttgt
ttgataggcgacaaagaccagcgagctgcttttgtcagagatgtgttgttgcctggagaa
tgggatgtctgcgtaacgtcgtatgaaatgcttatcaaagagaaatcggtattcaaaaag
tttaactggagatatctagttatagatgaagctcacaggattaaaaatgaaaaatcaaag
ttatcagaaatcgtgagggaattcaagactacaaatcggctgctattaactggaactcca
cttcagaacaacttacacgaactctgggcacttcttaacttccttttgccagatgtcttt
aactcatctgaagactttgattcatggtttgatacaaacaactgtctaggggatcaaaag
ttagtggaacgtctccatatggtgctacgaccattccttctacgtcgcattaaggctgat
gtagagaagagcttgcctccaaagaaggaagttaaaatttacgtgggtctcagcaaaatg
caacgagaatggtatacacgaatcctaatgaaggatatagatatattgaattcagctggg
aagctggacaaaatgagactcttgaatatcctcatgcagctgcgaaaatgttgcaatcat
ccatatctctttgatggagcagaacctggtccgccttacacaacagatatgcatttggtc
accaacagtggcaaaatggtagtgttggacaaattgctacctaagttgaaagaacaagga
tcaagagtcttaatcttcagtcagatgaccagagtcctagatatcttggaagattactgt
atgtggcgaaattatgaatattgtagactggatggacaaacaccacatgatgaaagacag
gcatctattaatgcatataatgaacctggtagctcaaaatttgtgttcatgttaagtaca
cgggcaggaggtcttggaatcaatctggctactgctgatgttgtaattctttatgattca
gactggaatccacaagtagatcttcaagctatggatcgagcacacagaattggccaaaca
aagactgttcgagtgttcaggtttatcacagacaatacagtggaagaaagaatagtggaa
cgtgcagaaatgaaactgcgactagattccatagtcattcagcaaggaagactggtggat
caaaacctgaataaacttgggaaggatgaaatgctgcaaatgattcgtcacggagcgacc
catgtgtttgcctcaaaggagagtgagattacagatgaagatattgatcacatattggaa
agaggtgcaaagaagactgcagaaatgaatgaaaagctttcaaagatgggtgaaagctca
ctcaggaatttcacaatggatacagagtccagcgtgtataattttgaaggggaagactac
agagaaaaacagaagatggcatttacagagtggattgaaccacctaaacgagaaagaaaa
gccaattatgctgtggatgcttacttcagggaggctcttcgagtcagtgagccaaaagca
cccaaggcaccacggcctccaaaacagccaaatgtacaggactttcagttctttcctcca
cgcctgtttgaactattggagaaagagattctctactacaggaaaacaattgggtacaaa
gtacctcgtaatcctgatctgccaaatgcagcccaagcacaaaaggaagagcagcttaag
attgatgaggctgaacctcttaatgatgaagaactagaagaaaaagagaaacttctaacg
cagggattcactaactggaataagagagattttaaccagttcatcaaagctaatgagaag
tggggccgagatgacattgaaaatatagcacgagaagtagaaggaaaaactccagaggaa
gtcattgagtattcagctgtattctgggaaagatgcaatgaactccaagacatagagaag
atcatggctcagatagaaagaggagaagccagaattcagagacgaatcagcattaaaaaa
gcacttgatacaaagattggcagatataaagcccctttccaccagctaagaatatcatat
ggtactaataaagggaagaattacacagaagaggaggatcgctttctaatctgtatgctt
cacaagctaggatttgataaagaaaatgtctatgatgaattaagacagtgtatccgaaac
tccccgcaattcagatttgactggtttctcaagtccaggactgcaatggagctgcagagg
agatgcaataccttaatcaccctgattgaaagagaaaacatggaactggaagaaaaggaa
aaggcagaaaagaagaaacgtggaccaaaaccatcttcggcacagaagcgcaaaatggat
ggtactcctgatggtcgtggaagaaaaaagaagctaaagctgtga
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integrated database retrieval system
