Phalacrocorax aristotelis (European shag): 142056194
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Entry
142056194 CDS
T11493
Symbol
YTHDC1
Name
(RefSeq) YTH domain-containing protein 1 isoform X1
KO
K20100
YTH domain-containing protein 1
Organism
parx Phalacrocorax aristotelis (European shag)
Brite
KEGG Orthology (KO) [BR:
parx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
parx03041
]
142056194 (YTHDC1)
Spliceosome [BR:
parx03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
142056194 (YTHDC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
YTH
Motif
Other DBs
NCBI-GeneID:
142056194
NCBI-ProteinID:
XP_074946706
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Position
4:24394547..24415991
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AA seq
711 aa
AA seq
DB search
MATRRKMASPGYFPAVSDGELNVLDDILTDAPDQDDELYNPDSEQDKSEKKGSKRKTERM
ENAESKRQKLVHSSRQMMPKPPSSSVSNNKRIVSTKGKPVSEYKNEEYQRSDRNKRPDGD
RKTRMSSSSREPYKGPPEKTCMRKRDIDRRAKSSTPDGSERIRHDVDRRPSRSSHSSKEE
VNSEEYCSDHETGSSGSSEQGNTENDEEGMEEEEDDEGEEDEEVEEDGEEDEEEYEQDER
DQKEGNDYDTRSEASDSDSESASFTDGSVRSGTGSDASDEKKKERKRARGISPIVFDRSG
SSASESYAGSEKKHEKLSSSVRAVQKDQTSKLKYILQDARFFLIKSNNHENVSLAKAKGV
WSTLPVNEKKLNAAFRSARSVILIFSVRESGKFQGFARLSSESHHGGSPIHWVLPAGMNA
KMLGGVFKIDWICRRELPFTKSAHLTNPWNEHKPVKIGRDGQEIEPECGTQLCLLFPPDE
SIDLYQVIHKMRHKRRMHSQPRSRGRPSRRDPVRDVGRRRPEDYDIHNSRKKPRIDYPPE
FHQRPGYIKDPRYPEVDRRFSGVRRDVFLNGSYNDYVREFHNMGPPPPWQGMPPYPGMEQ
PPHHPYYQHHAPPPQAHPPYSGHHPVPHEARYRDKRVHDYDMRVDDFLRRTQAVVSGRRS
RPRERDRERERDRPRDNRRDRERDRGRDRERERERICDRDRDRGERGRYRR
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
atggccaccagaagaaaaatggcctccccaggttactttcctgctgtttcagatggtgaa
ctgaatgttctggatgacattttgactgatgctcctgaccaagatgatgagttgtataac
ccggacagcgagcaagataaaagtgagaaaaaggggtcaaaaagaaaaactgagaggatg
gaaaatgctgaaagcaagagacaaaaacttgtgcattcatcgaggcagatgatgccaaaa
cctcctagttcatcagttagcaataacaagagaatagtgagtacaaaaggaaagccagta
tcggaatacaagaatgaggagtatcagaggtctgatagaaacaagcgcccagacggtgat
cgaaagacacgcatgtcaagcagttccagggagccttataaaggaccaccagaaaaaact
tgtatgaggaagagggatattgacagaagggcgaagtcttctacgccagatggttcagag
agaatcaggcatgatgtggatagaaggccaagcagatccagccattcctctaaagaagag
gtgaactctgaggaatattgttcagatcatgagactggcagcagtggttcctctgaacaa
ggcaatacagagaacgacgaggaaggaatggaagaagaggaagatgatgaaggggaagag
gacgaagaggtggaagaagatggggaggaggatgaagaagagtatgaacaggatgagaga
gatcagaaggaaggaaacgactatgacacaagaagtgaagccagcgattctgattctgaa
tctgcctctttcacagatgggtcagtcagatctggaactggttcggatgcatcagatgag
aaaaagaaggagaggaagagagctagaggtatctctccgattgtttttgacagaagtgga
agttctgcatcagaatcatatgcaggttcagaaaagaagcatgagaaattatcatcttcc
gttcgtgctgtccaaaaagaccaaacaagtaaacttaaatacattctccaagatgcaaga
ttctttctcatcaagagtaataaccatgaaaatgtgtcgcttgctaaagcaaagggagta
tggtcgacacttccagtgaatgaaaagaagcttaatgctgcatttcgatcagcgaggagt
gttattttgatattttctgtaagagagagtggcaaattccaaggatttgcaagactgtct
tcagagtcccatcatggaggatcacctatacactgggtgctgcctgcaggaatgaatgca
aaaatgctgggaggtgtctttaaaattgactggatttgcaggcgtgaattgccgttcact
aagtctgctcacctgaccaatccttggaacgaacataagccagtaaagattggacgtgat
ggacaggaaattgagccggaatgtggaacccaactttgtcttctcttccctcctgatgaa
agtattgacttgtatcaagtcattcataaaatgaggcacaagagaagaatgcactcacaa
ccccgatcaagaggacgcccatcccgtcgagaccctgttcgggacgtgggaaggcgtcga
ccagaagattatgatattcataacagcagaaagaaaccaaggattgactatccccctgag
tttcaccaaagaccagggtatataaaggatcccagatatcccgaagtagacagacgattt
tcaggagttcggcgagatgtatttttaaatgggtcctacaatgattacgtgagggaattc
cacaacatgggaccaccaccaccatggcaaggaatgccaccctatccaggtatggagcag
ccaccacaccacccttactatcagcaccatgcacctccacctcaagctcaccctccgtac
tcaggacatcatcctgtaccacatgaagcaagatacagagacaaacgagtacatgactac
gacatgagagtagacgattttcttcgccgcacacaagcagttgtcagcggtcggagaagc
aggcctcgggagagggaccgagagcgggaacgggaccgtcctagagataacagaagagac
agagaacgtgacagaggccgtgatcgggaaagggagagagagaggatttgtgaccgggac
agagacagaggtgaaagaggtagataccgaagataa
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