Phalacrocorax aristotelis (European shag): 142056294
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Entry
142056294 CDS
T11493
Symbol
SMARCAD1
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1
KO
K14439
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 [EC:5.6.2.-]
Organism
parx Phalacrocorax aristotelis (European shag)
Brite
KEGG Orthology (KO) [BR:
parx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
parx03036
]
142056294 (SMARCAD1)
Chromosome and associated proteins [BR:
parx03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
142056294 (SMARCAD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
CUE
ERCC3_RAD25_C
HHH_3
Motif
Other DBs
NCBI-GeneID:
142056294
NCBI-ProteinID:
XP_074946936
LinkDB
All DBs
Position
4:complement(31406439..31453902)
Genome browser
AA seq
1025 aa
AA seq
DB search
MSLYNLDRFRFERKRRNGAQETVSPSAAPSRPGSSAAAGAAAGGEEDEATDDSNRPDTPA
SDAAEITGYSAIPETPEAKRTRTQSYFKHQRGVQFLDLSSDSEDDEPRNFSTAKENRAPR
RDTAVISEQSDDDEQPEDELPQLAYVNGVDQPPAVKKSVDEDIRDAKLQTLKELFPQKSD
QELLQLIESSHTMDEAIAAGLKFNDEAASRKRKLKDSPTNCKDRNEQVTKKPKANYLDES
EPQRQWERQEMLVKKLQNTFPGLDKEELRDVLQEHNWVFHEALEALKVFAEDDEGMEFPP
KSEASDWTEASAKSRSDESEEKPKQKSSGKEQNGFQKKDKGKRNVWSTKRETDDLEDESA
SEDGGSSLDEDYSSGDEVMDDGYKVKILSFLQDASPSELTLIPQCSQKKAQKIIALRPFN
SWEALFTKMTKTTGLSEDIVWNCKILLKERDVVLKLMNKCEDISNRLTKQVTKITEDGGC
GWNIEQPSILNQSLELKPYQKIGLNWLALLHKHGLNGILADEMGLGKTIQAIAFLAYLYQ
EGNRGPHLIVVPASTLDNWIREVHLWCPELNVLFYYGSQEDRKHLRVDINNKVVDFNVIV
TTYNCAISSSDDRGLFRKLKLNYAIFDEGHMLKNMSSVRYQHLMTINAKNRLLLTGTPVQ
NNLLELMSLLNFVMPHMFSSSTSEIRRMFSSKTKSAEEQSIYEKERIAHAKQIIKPFILR
RVKDEVLKQLPPKKDLIELCAMSEKQEQLYCDLLNKLKKTINSNEKNSDMGNVMMQLRKM
ANHPLLHRQYYTADKLRTMSMLMLKEPTHCDANPDLIFEDMTVMTDFELHLLCKQYSHVS
DFKLDMDHILDSGKFRALERILSDLKEKGDRVVLFSQFTMMLDILEVFLKHWQHRYIRLD
GKTQISDRIHLIDEFNTDMGIFVFLLSTKAGGLGINLTSANVVILHDIDCNPYNDKQAED
RCHRVGQTREVKVIKLISKGTIEESMLKISQQKLKLEQDMTAADSGEEGTIPADIATLLK
ASLGL
NT seq
3078 nt
NT seq
+upstream
nt +downstream
nt
atgagtctctacaacttggaccgctttcgctttgagaggaagagaagaaacggggcgcag
gaaaccgtgtctccttcggcggccccgtcgcggcccggcagctctgccgccgcgggtgcc
gctgctggcggcgaggaggacgaagctacggacgacagcaacaggccagatactccagct
tcggatgcggcggaaataactgggtactctgccatcccagaaactcctgaagccaagagg
acaaggacacaatcttatttcaagcatcaaagaggggtacagttcctagatttgtcttca
gacagtgaagatgacgaaccaagaaacttcagcactgcgaaagaaaacagggctccaagg
agagacacggctgtaatttctgaacagtctgatgatgatgagcagcctgaagacgaacta
ccccagttggcatacgtgaatggtgtggatcagccaccagctgtgaagaagagtgtagac
gaagacatcagagatgcaaagctacaaacactgaaggaactttttccccaaaaaagtgac
caagaattactacaattgatagaatcatcacacacaatggatgaagcaatagccgctggt
ttgaagttcaatgatgaagctgcctctcgtaaaaggaaactaaaggattctcccacaaat
tgcaaagacagaaatgagcaagtcacaaaaaagccaaaagctaattatctggatgagtca
gaaccccaaaggcaatgggagaggcaagagatgcttgtgaagaagctgcaaaatacgttc
cctggattggataaggaggaactgagagatgtactgcaggaacataactgggtgtttcat
gaagcactggaggccctgaaagtatttgcagaagatgatgagggcatggaatttcctccc
aaaagcgaagcttctgactggactgaagcctctgccaagagcagaagtgatgagagtgaa
gagaagccgaagcagaaatcttctgggaaagagcagaatggctttcagaaaaaggacaaa
ggcaaaaggaatgtttggagtactaaaagagaaacagacgacttggaggatgagtctgct
tctgaagacggtggtagctcccttgatgaagactacagcagcggtgatgaagtgatggat
gatggctacaaagtgaaaatcctcagcttcctgcaggatgcttccccgagtgaactgact
ttgattccccagtgttctcagaaaaaggctcagaagataatagcactccggccctttaac
agctgggaggctctgttcacaaaaatgactaagactactggtttgtcagaagacatagtg
tggaactgcaagatactgctgaaggagagggatgtggttctaaagctcatgaataaatgt
gaagacatttcaaatagactgacaaaacaagtaaccaagattactgaagatggaggatgt
ggatggaacatagagcaaccctcaattctgaatcagagtttggaactcaagccgtatcag
aagattggtttgaactggttagcactgctgcataaacatggattgaatggcatattggct
gatgaaatgggtttaggaaaaacaattcaagctattgcatttctagcttatctctaccaa
gagggcaataggggtccccatttgatagttgtgccagcttcaacattagataactggata
agagaagttcatctgtggtgtcctgaactgaatgtccttttttactatgggtcccaagaa
gacaggaaacatctcagggtggacattaataataaagttgttgatttcaatgtgattgta
actacatacaactgtgcaattagcagctcagatgatcgaggactgtttcgcaagttaaaa
cttaactatgcaatttttgatgaaggtcatatgctcaagaacatgagctctgtacgctac
cagcaccttatgacaattaatgcaaagaatcgcttgctgctgacggggactccggttcaa
aataatctgttggaattgatgtccctcttgaattttgtcatgccgcatatgttcagcagt
agcacaagtgaaatccgaaggatgttctcttcaaaaacaaagagcgctgaagaacaaagc
atatatgaaaaggagaggattgcacacgcaaagcagataataaaaccattcatcctgaga
agagtaaaagatgaggtccttaaacagctacctcccaaaaaagatctaattgaattatgt
gccatgtctgagaaacaggaacaactatactgtgatctcttaaacaagctcaagaaaact
attaacagtaatgagaaaaactctgatatgggaaatgtaatgatgcaactcagaaaaatg
gctaatcaccctctcttgcatcgccagtattacacagctgacaagctcaggacaatgtcc
atgcttatgctcaaggaacccacacattgtgatgctaaccctgaccttatctttgaagat
atgacagtaatgacagattttgagctgcatttgctttgtaagcaatattctcacgtcagt
gacttcaagttagacatggatcacatcttggattctggaaagtttagggcactggaacgc
attctctctgaccttaaagagaagggtgacagagttgtattgtttagccagtttactatg
atgctggatatcttggaagttttcctaaaacactggcaacatagatatattaggttggat
ggaaaaacacagatttctgatcggatacatttgatagatgagttcaatacagatatgggt
atatttgtattcctcctgtcaaccaaagctggtggtttgggaattaatctgacctcagca
aatgttgttattcttcatgacatcgattgcaacccatacaatgataagcaagcagaagac
agatgccatagagtaggtcagacaagagaagtaaaagtcataaagctaatcagtaagggg
actattgaagaatccatgctcaaaatcagccagcagaaattgaagttagaacaagatatg
actgcagcagattcgggagaagaaggaaccattccagcagatatagccacactattaaaa
gcttcgttaggtctctaa
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