Phalacrocorax aristotelis (European shag): 142056583
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Entry
142056583 CDS
T11493
Name
(RefSeq) toll-like receptor 6
KO
K10169
toll-like receptor 6
Organism
parx Phalacrocorax aristotelis (European shag)
Pathway
parx04145
Phagosome
parx04620
Toll-like receptor signaling pathway
parx05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
parx00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
142056583
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
142056583
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
142056583
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
parx04131
]
142056583
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
parx04054
]
142056583
04090 CD molecules [BR:
parx04090
]
142056583
Membrane trafficking [BR:
parx04131
]
Endocytosis
Phagocytosis
Toll-like receptors
142056583
Pattern recognition receptors [BR:
parx04054
]
Membrane-bound pattern recognition receptors
Toll-like receptors
142056583
CD molecules [BR:
parx04090
]
Proteins
142056583
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
TIR
LRR_1
LRR_6
TIR_2
LRR_LRWD1
LRRCT
LRR_9
LRR_R13L1-DRL21
Motif
Other DBs
NCBI-GeneID:
142056583
NCBI-ProteinID:
XP_074947764
LinkDB
All DBs
Position
4:58718730..58729660
Genome browser
AA seq
818 aa
AA seq
DB search
MGPRTNVYVFACVSTFMLWNSIQATVENEFIANYSSSLLTNIPNNIPVHTRVLDLSHNRI
SGLSISEFISLSDLQVLNLSHNLITELDFSAFIFNEHLEYLDLSHNSILKVYCQTLPYLR
HLDLSFNKFTVLPICQEFGNMFRLEYLGLSATMMRRSDFRYIIPLQLHTVFLTLEDFSLY
EPQSLTTLNTRSLYIVFAANQNFSFYLLYDGMSTSETVKIVNLRYSLSYKDFPSPTLTLL
KKIKTTALMLDTVDLQWPIILQIFLFIWYSPVEHLTVRHLTFRGPLQELNEYEFLLLLSS
LEQLMSVGGQMKALTLEHVRNKVYYFNQEILYRHFSEMNIASLTIYDAYMPHMLCPNRTS
SFQYLNFSHNALTDELFQNCGTLTDLKLLVLRRNKFESLSKVSFMTSHMKLLKYLDMSNN
LLSHAAADVQCQWAESLTELDLSSNQLTDSVFECLPVNIKKLDLQNNQITSVAKGMAELK
SLKELNLASNRLADLPGCSGFTSLEFLNIEMNSILTPSADFFQSCPRVKELQAGHNPFKC
SCELQDFIRLERQSGWKLFGWPAAYTCEYPEDLRGTQLKDFHLTELACNTMLLLVTALLL
TLVLVGVVAFLCIYLDVLWYVQMTWQWTQTKRRAWHNHPEEQERVLQFHAFISYSERDSL
WVKNELIPNLEKGEGGVQLCQHERNFIPGKSIVENIINCIEKSYKSIFVLSPNFVQSEWC
HYELYFAHHKLFSENSNSLILILLAPIPSYVIPARYHKLKALMAKRTYLEWPKERSKHAL
FWANLRAAISINLPISFEANEEQSHITSTGSVSQYVNN
NT seq
2457 nt
NT seq
+upstream
nt +downstream
nt
atgggaccccgtacaaatgtctatgtctttgcttgtgtctctacattcatgctatggaat
agtatccaggcaactgtggaaaatgaatttattgcaaattactcaagcagtttgctaact
aacattccaaacaacattccagtccatactcgtgtattagatttatcacataataggatc
tctggactcagtatctcagagtttatttctctttctgaccttcaagtattaaatctttct
cataacctaattacagagcttgacttcagtgccttcatttttaatgaacatttagaatac
ttagatttatctcataatagcattttgaaagtttactgtcaaactcttccatatcttaga
catttagatctttctttcaataagtttactgtcctgcccatctgtcaggaatttgggaac
atgtttcgtttggaatatctaggattaagtgccacaatgatgcgaaggtcagacttcagg
tatattatacctttgcagcttcacacagtcttcctaaccttagaagacttttctctgtat
gagcctcagagtctgacaaccttgaatacaaggagcctctatattgtatttgcagcaaac
caaaacttcagtttttacctcctgtatgatggaatgagcacttcagaaactgtaaaaata
gttaacttaagatatagcttgagctacaaggatttcccctctcctactttaacgcttctg
aagaaaatcaagacaacagctctaatgcttgacactgtggatttacaatggcctataatt
ttgcaaattttcctgtttatttggtattcacctgtggagcatttgactgtgagacatttg
acttttcggggtccactgcaggagctgaatgagtatgaatttctactattattaagctct
ctggaacaattaatgtctgtgggtggccaaatgaaagcgctaactttggagcatgttcgt
aacaaagtctattatttcaaccaggagattctatacagacatttttcagagatgaatatt
gccagtttgacaatatatgatgcatatatgccacacatgctttgccccaataggacaagc
tcatttcagtatttaaatttttctcacaatgccctgacagatgaattgttccagaattgt
ggcactctgacagatctgaaattacttgttttgaggaggaataaatttgagagcctttcc
aaggtaagcttcatgaccagccatatgaaattgctgaaatatttggacatgagcaacaac
ttgctgagtcacgctgcagctgatgtgcaatgccagtgggctgagtctctgacagagttg
gacctgtcctcaaatcagttgacggattccgtgtttgagtgcttgcctgtcaacatcaaa
aagcttgacctacaaaacaatcagatcaccagtgtggccaaggggatggctgagctgaaa
tccttgaaagagctgaacctggcatcaaacaggctggctgacctgccagggtgcagtggc
tttacatccctggagttcctgaatatagagatgaattcgatcctcaccccatctgccgac
ttcttccagagctgcccacgggtcaaggagctacaagctgggcacaacccgttcaagtgt
tcttgtgaactgcaagactttatccgtctggagaggcagtctggatggaagctgtttggc
tggccggcggcatacacgtgcgagtacccggaagacttgcgaggaacgcagctgaaggac
ttccacctgactgaactggcttgcaacacgatgctcttgcttgtgacagctctgctgctg
acgctggtgctggtgggtgtcgtggcctttctgtgcatctacctggatgtgctgtggtac
gtgcagatgacgtggcagtggacgcagacaaagcggagagcttggcacaaccaccccgaa
gagcaggagagagttctgcagttccacgcgttcatttcctacagcgagcgtgattcgttg
tgggtgaagaacgagctgatcccaaacctggagaagggggagggcggtgtccaactgtgc
cagcacgagagaaacttcatccctggcaagagcattgtggagaacatcattaactgcatt
gagaagagctacaagtcaatctttgtgttgtctcctaactttgtgcagagtgagtggtgt
cactatgagctgtactttgcccatcacaaattattcagtgagaattccaacagcttaatc
ctcattttactggcaccgatcccttcgtatgttatccctgcgaggtatcacaagctgaag
gctctcatggcaaagcggacgtacctggagtggccgaaggagaggagcaagcatgccctt
ttctgggctaacctgagggcagctattagcattaacctgccaatatcctttgaagcaaat
gaggagcagagtcatattacttctactggtagtgtaagtcagtatgtgaataactga
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