Phalacrocorax aristotelis (European shag): 142057220
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Entry
142057220 CDS
T11493
Symbol
SPOPL
Name
(RefSeq) speckle-type POZ protein-like
KO
K10523
speckle-type POZ protein
Organism
parx Phalacrocorax aristotelis (European shag)
Pathway
parx04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
parx00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
142057220 (SPOPL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
parx04121
]
142057220 (SPOPL)
Ubiquitin system [BR:
parx04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul3 complex
Adoptor and target recognizing subunit (BTB)
142057220 (SPOPL)
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GFIT
Motif
Pfam:
MATH_2
BTB
BACK_BPM_SPOP
MATH
BTB_2
BTB_KLHL33
Motif
Other DBs
NCBI-GeneID:
142057220
NCBI-ProteinID:
XP_074948934
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Position
5:complement(6978256..7013774)
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AA seq
392 aa
AA seq
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MSRVPTPPPPGEMSSGPVAESWCYTQVKVVKFSYMWTINNFSFCREEMGEVLKSSTFSSG
PNDKMKWCLRVNPKGLDDESKDYLSLYLLLVSCPKSEVRAKFKFSLLNAKREETKAMESQ
RAYRFVQGKDWGFKKFIRRDFLLDEANGLLPDDKLTLFCEVSVVQDSVNISGQSNTNTLK
VPECRLAEDLGNLWETTRFTDCSFYVGGQEFKAHKSVLAARSPVFNAMFEHEMEESKKNR
VEINDVDPEVFKEMMRFIYTGKAPNLEKMADNLLAAADKYALERLKVMCEEALCSNLSVE
NVADILILADLHSAEQLKAQAIDFINRCSVLRQLGCKDGKNWNSNQATDIMETAGWKSMI
HSHPHLVAEAFRALASAQCPQFGIPRKRLKQS
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atgtcaagggttcccaccccacctcctcctggggagatgtccagtggacctgtggctgaa
agctggtgttacacacaggttaaagtagtaaaattttcctacatgtggaccattaataac
ttcagtttttgccgagaagaaatgggtgaagttctaaagagttctaccttttcatcaggg
ccaaatgacaaaatgaagtggtgcctgagagtgaatccaaagggattagatgatgaaagc
aaggactacctgtcattatatttgcttttagtcagttgtccaaaaagtgaagtcagagca
aaattcaaattttccctgctgaatgctaaaagagaagaaacgaaagcaatggaaagccaa
agagcgtatcgattcgtgcaaggcaaggactggggttttaagaaatttatccgaagagat
tttttactagatgaagctaatggtcttctaccagatgacaagcttacattattttgtgag
gtaagcgtggtccaagactcagtaaatatatcaggacagtctaatacaaacactttgaag
gtacctgaatgtcgactagcagaagatttagggaatctctgggaaacaacaagatttaca
gattgcagtttttatgtaggaggacaagaattcaaagctcataaatctgtccttgcagca
cgatctccagtttttaatgcaatgtttgaacatgaaatggaggaaagcaaaaagaatcgt
gtagaaataaatgatgtagaccctgaagtttttaaagaaatgatgagattcatttacaca
ggaaaagcaccaaaccttgaaaaaatggctgacaatttgttagcagctgcagacaaatat
gcactggaacggctgaaggtcatgtgtgaggaagcactctgtagtaacctctcggtagaa
aatgttgctgacattcttatcctcgcagatttgcacagcgctgaacagttaaaagcacaa
gcaatagacttcattaacaggtgcagtgttcttagacaacttgggtgtaaagatgggaaa
aactggaatagcaaccaagcaacagacataatggaaacagcaggctggaagtccatgatc
cactcccaccctcacttagtagcagaggcctttcgcgcactagcatctgcacagtgccca
cagtttggcattccacgcaaacggctaaaacagtcatga
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