Phalacrocorax aristotelis (European shag): 142057450
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Entry
142057450 CDS
T11493
Symbol
ITGA6
Name
(RefSeq) integrin alpha-6 isoform X1
KO
K06485
integrin alpha 6
Organism
parx Phalacrocorax aristotelis (European shag)
Pathway
parx04382
Cornified envelope formation
parx04510
Focal adhesion
parx04512
ECM-receptor interaction
parx04514
Cell adhesion molecule (CAM) interaction
parx04518
Integrin signaling
parx04810
Regulation of actin cytoskeleton
parx04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
parx00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
142057450 (ITGA6)
04514 Cell adhesion molecule (CAM) interaction
142057450 (ITGA6)
04518 Integrin signaling
142057450 (ITGA6)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
142057450 (ITGA6)
09142 Cell motility
04820 Cytoskeleton in muscle cells
142057450 (ITGA6)
04810 Regulation of actin cytoskeleton
142057450 (ITGA6)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
142057450 (ITGA6)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
parx04147
]
142057450 (ITGA6)
04515 Cell adhesion molecules [BR:
parx04515
]
142057450 (ITGA6)
04090 CD molecules [BR:
parx04090
]
142057450 (ITGA6)
Exosome [BR:
parx04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
142057450 (ITGA6)
Exosomal proteins of breast milk
142057450 (ITGA6)
Cell adhesion molecules [BR:
parx04515
]
Integrins
Integrin alpha subunits
142057450 (ITGA6)
CD molecules [BR:
parx04090
]
Proteins
142057450 (ITGA6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Integrin_A_Ig_3
Integrin_A_Ig_2
Integrin_A_Ig_1
FG-GAP
FG-GAP_3
Motif
Other DBs
NCBI-GeneID:
142057450
NCBI-ProteinID:
XP_074949559
LinkDB
All DBs
Position
5:23854820..23901539
Genome browser
AA seq
1089 aa
AA seq
DB search
MAAALLFYLPFLPGLAGAFNLDTDNVISWRGEPDSLFGFSLAMHRQLQPQEKRLLLVGAP
RDKAFPSQQANRTGGLYSCDITSPNTRCTRVIFDEETDPKTESKEDQWMGVTVQSQGPGG
NVVTCAHRYEKRQYVNTAQETRDIVGRCYVLSQDLTIKDDMDNGVWSFCDGRLRGHEKFG
SCQQGVAATFTKDYHYIVFGAPGTYNWKGVVRAEQKNQTFYDLGIFDDGPYEVGDETRRD
KNLVPVPANSYLGFSLDSGKGIVSQDEMTFVSGAPRANHSGAVVLLKKEKNQRALSLEHM
FEGEGLASSFGYDVAVVDLNSDGWQDIVVGAPQYFDRSGDIGGAVYVYINQQGKWEGVKP
VRLNGTADSMFGLVVENVGDVNQDGYPDIAVGAPYDGSGKVYIYHGSKNGINTKPAQILD
GEETGIRFFGYSVAGNMDLDKNSYPDIAVGSLSDSIFVFRSRPVISIRKSITVQPDRIDL
KKKNPEDPSEIWMDVKACFQYSANPSDLNPRIKINYTFEVENERRQLGLPSRVRFKDHLS
DQFTASTVLRGQNSNECVKTKLVLQEKIKDKLRPIPISVSIKIAGLESNSPSARKERALP
ELIPILNSNEPETKTTKVEFLKEGCGEDNECHSNLKLQYRFCTREGNEDRFTYLPIENGM
PVLVLKDQKDIALEITVTNNPSDAKNPQKDGEDAYEAKLIATFPDTLMYSAFREMKGYPE
KQLTCGANQNGSQAECELGNPFKRNSNVTFYLILSTTKVNVDTTDLDIDLKLETTSTQVN
STPITARAKVVLELLLSLTGVAKPSQVYFGGNIVGESAMKSEDHIGNLIEYEFRVTNLGR
PLKTFGTASLDIQWPKEISNGKWLLYLMKIDSKGLEKVSCQPQNEINSLHVAESHNSRRK
REVAEKQITDSKTLSLFSERKYKTLDCNVNARCVDIKCPLKGLDSKASIVLRSRLWNSTF
LEEYSKMNYLDILVRASISVPAAAKNVKLTNEVAQVRVTVFPAKPVALYTGVPWWIISVA
IFAGILMLALLVFLLWKCGFFQRSRYEDSVPRYHAVRIRKEERQIKDGKCKDLETKQWLT
KWNEYESYS
NT seq
3270 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgcgctcctcttctacctgcccttcctgccagggctggccggcgccttcaac
ctggacacggacaacgtgatcagctggcgcggggagccggacagcctcttcggcttctcc
ctggccatgcaccggcagctgcagccgcaggagaaacggctattgctggttggagctcct
cgggataaggcctttccatcccaacaagccaacagaacaggagggctgtacagctgtgac
atcacgtctccaaatacacgctgcacacgtgtcatatttgatgaggaaactgacccgaag
acggagagtaaagaagaccaatggatgggtgtaactgtccaaagtcaggggccaggagga
aatgtggtgacatgtgcacatcgctatgagaaaaggcagtatgtaaacacagcgcaggaa
acccgggatattgttggaaggtgctatgtgctgagccaggatctcactattaaggatgat
atggataatggagtatggagtttttgtgatggtcgtttaagaggccatgagaaatttggt
tcctgtcagcaaggtgttgctgctacttttactaaagactatcattatattgtatttggt
gccccaggcacttacaattggaaaggggtggttcgtgcagagcaaaagaaccagacattt
tatgatctgggtatctttgatgatgggccttacgaagttggtgatgagacccgccgagat
aagaatctagttcctgttccagctaacagttacttaggtttctctctggactctggtaaa
ggcatcgtctcccaagatgagatgacttttgtgtccggtgccccaagagccaaccacagc
ggagcagttgttttactgaagaaagagaaaaatcagagagcactttcactcgagcacatg
tttgaaggagaaggactggcctcttcttttggctatgatgttgctgttgtggatctcaac
agtgacggatggcaagacattgttgttggagccccacagtattttgacagaagtggagac
attggtggtgctgtgtacgtctacattaaccagcaaggcaaatgggaaggagtaaaacct
gttcgcctaaatggaactgctgactccatgtttggtcttgtagttgaaaatgttggtgac
gttaatcaggatggatatccagatattgcagtaggggctccatatgatggttctggcaaa
gtatacatttatcatggatccaagaatggaataaatacaaaaccagcacagattctcgat
ggtgaagaaacaggcatccgtttctttggttactctgttgctggaaacatggacctggat
aaaaattcctaccctgatattgctgttggttccctttcagattctatatttgtgttcaga
tctcggcctgtgataagcattaggaaaagcattacagtgcagcctgacagaattgatcta
aagaaaaagaaccctgaggaccccagtgaaatatggatggatgtgaaagcgtgttttcaa
tatagtgcaaaccccagtgatctaaatccaagaataaagatcaactatacatttgaagtg
gaaaatgagaggaggcagttaggcctgccgtctagggtacggtttaaagaccacctgtct
gatcagtttactgcaagtacagtcctaagggggcagaactcaaatgagtgtgtgaaaacc
aagcttgtgctgcaggaaaaaattaaagataagctacgccccattccgatatcagtcagt
attaaaattgctggcctggagtctaactcgccgtctgccagaaaagagagagcacttcca
gagcttataccaattctaaattcaaatgaacctgaaacaaagaccacaaaagtggagttc
ttaaaagaaggttgtggagaagacaatgaatgtcacagcaatctgaaacttcagtaccgg
ttttgcactagagaaggaaatgaagacaggtttacttatttgccgattgaaaatggcatg
ccagtgcttgttctgaaagaccagaaagatattgccctggaaataacagtgacaaacaat
ccatctgatgcaaaaaatccacaaaaagatggcgaagacgcatatgaagctaaactgatt
gcaacttttccagacactctgatgtattctgcattcagggagatgaagggttatcctgaa
aaacagctaacatgtggtgctaaccaaaatggttctcaagcagagtgtgaacttggaaat
cctttcaaaagaaattccaacgtaaccttttatctgatcttgagtaccactaaagttaat
gttgatacaacagacttagacattgatctgaagttggaaacaacaagcactcaagttaat
tcgactccaattacagctcgtgctaaagtggttcttgaattgcttttatcactcactgga
gttgctaagccttctcaggtgtattttggaggtaacatcgttggtgagagtgctatgaaa
tctgaagatcatattggaaacctcatagaatatgaattcagagtaactaacttgggcaga
ccactgaaaacatttggtaccgcttccctggacatccaatggccgaaagaaattagtaat
ggcaaatggctactttatttgatgaaaatagattccaaaggcttggaaaaagtctcctgt
caaccccagaatgaaatcaatagtttgcatgttgcggaatcccataactcaagaaggaaa
cgtgaggttgcagagaagcagattacagacagcaagacactttcgttgttctcagaaaga
aaatacaagactttggactgtaatgtgaacgcacgctgcgtggacataaaatgtcccctg
aagggtttagacagcaaggcatctattgtgctgcgttccagactgtggaacagtactttc
ttagaagaatactccaaaatgaactacctggacattctcgttcgggcttcaatcagtgtt
cctgctgcagctaagaatgttaaactcacaaatgaagttgctcaggtgcgtgttactgtc
tttcctgcaaaaccagtagcactttatacaggagtaccttggtggatcatctcagtggct
atttttgctggaatactgatgctggcactgttggtattcttactatggaagtgcgggttc
ttccagcgttctaggtacgaagacagtgtcccccgatatcatgctgtaagaattcgaaaa
gaagagcgacagatcaaagatgggaagtgcaaagacctcgagacaaaacagtggctcaca
aaatggaatgaatatgaaagttattcttag
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