Phalacrocorax aristotelis (European shag): 142057546
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Entry
142057546 CDS
T11493
Symbol
CYFIP1
Name
(RefSeq) cytoplasmic FMR1-interacting protein 1 isoform X1
KO
K05749
cytoplasmic FMR1 interacting protein
Organism
parx Phalacrocorax aristotelis (European shag)
Pathway
parx04810
Regulation of actin cytoskeleton
parx05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
parx00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
142057546 (CYFIP1)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
142057546 (CYFIP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
parx03019
]
142057546 (CYFIP1)
Messenger RNA biogenesis [BR:
parx03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
142057546 (CYFIP1)
Factors involved in mRNA localization
Other mRNA localization factors
142057546 (CYFIP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FragX_IP
CYRIA-B_Rac1-bd
zf-CW
LRIF1
Motif
Other DBs
NCBI-GeneID:
142057546
NCBI-ProteinID:
XP_074949862
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All DBs
Position
1:complement(74928395..75006721)
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AA seq
1253 aa
AA seq
DB search
MTAQVTLEDALSNVDLLEELPLPDQQPCIEPPPSSLLYQPNFNTNFEDRNAFVTGIARYI
EQATVHSSMNEMLEEGQEYAVMLYTWRSCSRAIPQVKCNEQPNRVEIYEKTVEVLEPEVT
KLMNFMYFQRNAIERFCGEVRRLCHAERRKDFVSEAYLITLGKFINMFAVLDELKNMKCS
VKNDHSAYKRAAQFLRKMADPQSIQESQNLSMFLANHNKITQSLQQQLEVIVGYEELLAD
IVNLCVDYYENKMYLTPSEKHMLLKVMGFGLYLMDGNVSNIYKLDAKKRINLTKIDKFFK
QLQVVPLFGDMQIELARYIKTSAHYEENKSRWTCTSSSSSPQYNICEQMIQIREDHMRFI
SELARYSNSEVVTGSGRQEAQKTDAEYRKLFDLSLQGLQLLSQWSAHVMEVYSWKLVHPT
DKYSNKDCPDNAEEYERATRYNYTSEEKFALVEVIAMIKGLQVLMGRMESVFNHAIRHTI
YAALQDFAQVTLREPLRQAIKKKKNVIQSVLQAIRKTVCDWEAGHEPFNDPALRGEKDPK
SGFDIKVPRRAVGPSSTQLYMVRTMLESLIADKSGSKKTLRSSLEGPTILDIEKFHRESF
FYTHLINFSETLQQCCDLSQLWFREFFLELTMGRRIQFPIEMSMPWILTDHILETKEASM
MEYVLYSLDLYNDSAHYALTKFKKQFLYDEIEAEVNLCFDQFVYKLADQIFAYYKAMAGS
LLLDKRLRSECKNQGATIQLLQSNRYETLLKQRHVQLLGRSIDLNRLITQRISAAMYRSM
ELAIGRFESEDLTSIVELDGLIEVNKMTHKLLSRYMTLDSFDAMFREANHNVSAPYGRIT
LHVFWELNYDFLPNYCYNGSTNRFVRTVLPFSQEFQRDKQPNAQPQYLYGSKALNLAYSS
IYSNYRNFVGPPHFKVICRLLGYQGIAVVMEELLKVVKSLLQGTILQYVKTLMEVMPKIC
RLPRHEYGSPGILEFFHHQLKDIVEYAELKTVCFQNLREVGNAVLFCLLIEQSLSLEEVC
DLLHAAPFQNILPRVHVKEGERLDAKMKRLESKYAPLHLVPLIERLGTPQQIAIAREGDL
LTKERLCCGLSMFEVILTRIRSFLDDPIWRGPLPSNGVMHVDECVEFHRLWSAMQFVYCI
PVGTHEFTVEQCFGDGLHWAGCMIIVLLGQQRRFDVLDFCYHLLKVQKHDGKDEVIKNVP
LKKMVERIRKFQILNDEIIAILDKYLKSGDGESTPVEHVRCFQPPIHQSLASN
NT seq
3762 nt
NT seq
+upstream
nt +downstream
nt
atgactgctcaagtaacactggaagatgccttgtccaacgtggacctcttggaagaatta
ccattgccagatcagcaaccgtgtattgaacccccaccatcatctctgctttaccagcca
aacttcaacactaattttgaggacagaaatgcatttgtcactggcattgcaagatacatc
gagcaagctacagtccattctagcatgaatgaaatgctggaagagggtcaggaatatgca
gtcatgttatacacatggagaagctgctcaagagccattcctcaggtcaagtgcaacgag
cagcctaacagggtagaaatctatgagaaaactgtggaagttctggagccagaagtcaca
aaactgatgaattttatgtattttcagagaaatgcaattgaacgattttgtggggaggtg
agacgcttatgccatgcggagaggaggaaggactttgtgtccgaagcatatctgatcact
ctgggcaaattcatcaacatgtttgcggtattggatgagctgaaaaatatgaagtgcagc
gtgaagaacgaccattcagcctacaagcgagccgctcaatttctgcggaaaatggcagat
cctcagtccattcaagaatcccagaacctctccatgttccttgccaaccacaacaagata
acacaatctttacagcagcagttggaggtgatcgttggctatgaagaactgcttgcagat
attgtaaatttgtgtgtggactactatgagaacaaaatgtatctaacgcccagtgagaaa
catatgcttttgaaagttatgggctttggattgtacctgatggatggaaatgtcagtaac
atctataagctggatgcaaagaaaaggataaatttaaccaaaatagacaagttctttaag
cagttgcaggttgtcccactgtttggtgacatgcagattgaacttgcaagatacattaag
accagtgcccattatgaggaaaacaaatccagatggacatgcacgtcttccagcagcagt
ccccagtacaatatatgtgagcagatgatccaaatcagagaagaccatatgcgtttcata
tcagaactggctcgttacagcaacagtgaggtggtgactgggtctggtcgacaagaagct
caaaaaacagatgcggagtatcggaagctctttgatctctctctccaaggcctgcagctt
ctctcccagtggagtgcacatgtcatggaagtgtattcgtggaagctggtacacccaact
gacaaatattctaataaagactgtcctgacaatgcggaagaatatgaaagagcaacaaga
tacaattacactagtgaggagaagtttgctttggttgaggtgattgccatgatcaaaggt
cttcaggtgctgatgggaaggatggaaagtgttttcaatcatgccattcgccataccatt
tatgcagctcttcaagactttgcccaggtgacacttagagagccattaagacaagccatt
aaaaagaagaaaaatgtcattcagagtgttttgcaggccatcagaaagacagtctgtgac
tgggaagctggccacgagcccttcaatgacccagctctaaggggagagaaggaccccaaa
agtggttttgacatcaaggtcccgaggcgtgcagtgggaccctccagcactcagctttac
atggtgagaactatgttagagtccctcattgctgacaaaagtggttccaagaaaaccttg
agaagtagccttgagggacccaccatattggacatagaaaaattccatcgcgagtctttc
ttctacactcatttgataaatttcagtgaaaccctgcagcaatgctgtgatctgtcccag
ctgtggttcagggaattcttcttagagctgaccatgggcagaagaatccagtttcccatt
gagatgtccatgccttggattctgacagaccatattttggagaccaaagaggcatcaatg
atggagtatgttctgtattctttggacctttataatgacagtgctcattatgcacttact
aaatttaagaagcagttcctctatgatgagattgaggcagaggtaaacctatgttttgac
caatttgtctacaagctggcagaccaaatatttgcatactacaaggcaatggctggcagc
ctgcttctggataaacgattacgttcagaatgcaagaatcagggagcaaccatccagttg
ctacagtccaaccgctacgagacattgctgaaacagagacatgtccaacttctcgggagg
tcaatagacctgaaccgactgatcactcagcgaatttcagcagccatgtacaggtcaatg
gaactggcaattggtcgatttgaaagtgaggatttgacttccattgtggagctggatggc
ttgatagaggtaaacaaaatgactcacaagcttctgagtagatatatgaccttggacagc
ttcgatgccatgttcagggaagccaatcacaatgtgtcagccccttatggaagaatcact
cttcatgtcttttgggaactcaattatgatttccttccaaactactgctacaatggatcc
actaacaggtttgttcggaccgtgctaccattttctcaggagtttcagagagataagcag
cctaatgcacagccacagtatctctatggatcgaaggcgttgaatctcgcatattccagt
atctacagcaactacaggaattttgttggacctcctcacttcaaagtcatctgtagactt
cttgggtatcagggtattgctgtggtgatggaggagttgctgaaagttgtcaagagcctg
ttacaagggacgattcttcagtatgtcaagaccctaatggaagtgatgcctaagatctgt
aggttaccaagacatgagtatggttctccaggtatcttggagttttttcatcatcagttg
aaggacatcgttgaatatgcagaactgaagactgtctgcttccagaatttgcgggaagtg
ggaaatgctgtcctgttttgcctcctcattgaacagagtctgtccctagaggaagtgtgt
gacctgttgcacgcggcgccgttccaaaatatcctgcccagagttcacgtcaaagagggt
gaaagactcgatgctaaaatgaagaggctagaatcaaaatacgctccactacatttggtt
cctctcattgaaagactaggaacaccccagcaaatcgcaatcgcaagggaaggggacttg
ctgaccaaagaacgcctctgctgcggcctgtccatgtttgaggttatcctgacgaggatc
cgctccttcctggacgatcccatctggcgcgggcccctgcccagcaatggggtgatgcac
gtggacgagtgcgtggaattccatcgcctctggagcgcgatgcagttcgtctactgcatc
cccgtgggaacgcacgagttcactgtggagcagtgctttggagacggcttgcactgggct
ggctgtatgatcatcgtgcttttggggcagcagcgtcgcttcgacgtgttggatttctgc
taccacctgttgaaagtccaaaagcatgatggcaaagacgaggttataaagaatgtgcct
ttgaagaaaatggttgagagaattcgcaagttccagattctgaatgatgaaataattgct
attttggacaagtatttgaaatccggcgatggagagagcacacccgtggaacacgtgcgc
tgcttccagccacctattcatcagtcccttgccagcaactag
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