Phalacrocorax aristotelis (European shag): 142057733
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Entry
142057733 CDS
T11493
Symbol
LRRC4C
Name
(RefSeq) leucine-rich repeat-containing protein 4C
KO
K07523
netrin-G1 ligand
Organism
parx Phalacrocorax aristotelis (European shag)
Pathway
parx04514
Cell adhesion molecule (CAM) interaction
parx04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
parx00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
142057733 (LRRC4C)
04517 IgSF CAM signaling
142057733 (LRRC4C)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
parx04515
]
142057733 (LRRC4C)
Cell adhesion molecules [BR:
parx04515
]
Immunoglobulin superfamily
NGL family
142057733 (LRRC4C)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_5
LRR_4
I-set
Ig_3
ig
LRR_1
LRR_14
V-set
LRR_9
Ig_2
LRR_LRWD1
Ig_6
Sp38
Syndecan
Motif
Other DBs
NCBI-GeneID:
142057733
NCBI-ProteinID:
XP_074950418
LinkDB
All DBs
Position
5:47546337..47647796
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AA seq
638 aa
AA seq
DB search
MLNKMTLHPQQIMIGPRFNRALFDPLLVVLLALQLLVVAGLVRAQTCPSVCSCSNQFSKV
ICVRKNLRDVPDGISTNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAF
NGLANLNTLELFDNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLG
ELKRLSYISEGAFEGLSNLRYLNLAMCNLREIPNLTPLVKLDELDLSGNHLTAIRPGSFQ
GLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLRLERIHLHHN
PWNCNCDILWLSWWIKDKAPSNTACCARCHTPPSLKGRYIGELDLNYFTCYAPVIVEPPA
DLNVTEGMAAEMKCRASTSLTSVSWITPNGSVMTHGAYRVRIAVLSDGTLNFTKVTVQDT
GLYTCMVSNSVGNTTASATLNVTALDNPGYTYFSTVTVETVEPSQDEAQTTEQVGPTPVT
SWETTNMTTSFTPQSTRSTEKTFTIPVTDANNGIPGIDEVMKTTKIIIGCFVAITLMAAV
MLVIFYKMRKQHHRQNHHAPTRTVEIINVDDELTGDTPIESHLPMPAIEHEHLNHYNSYK
SPFNHTTTVNTINSIHSSVHEPLLIRMNSKDNVQETQI
NT seq
1917 nt
NT seq
+upstream
nt +downstream
nt
atgttgaacaagatgaccttacatccacagcagataatgataggtcctaggtttaacagg
gccctatttgaccccctgcttgtggtgctgctggctcttcagcttcttgtggtggctggt
ctagtgagggctcaaacttgcccttctgtctgctcctgcagcaaccagttcagtaaagtg
atttgtgtacggaaaaatctgagagacgtgccagacggcatctccaccaacacccggtta
ctcaatctccatgagaaccagatccaaatcattaaagttaatagcttcaagcacctgagg
cacctagaaatcctgcagctcagcaggaatcacatcagaacaattgaaataggggctttc
aatggtctggccaatctcaacactttggaactctttgacaatcgtctgaccactatccca
aatggggcttttgtatacctgtcaaaactgaaggaactgtggttgagaaacaaccctatt
gagagcatcccttcttatgcttttaacagaatcccttctctccggaggctggatttgggg
gaactgaaaaggctttcatacatctcagaaggtgcctttgagggtctgtctaacttgagg
tatttgaaccttgccatgtgcaatcttcgagagattcctaacctcaccccacttgtaaaa
ctggatgagttagatctttctgggaatcacctgactgccatccggccaggttctttccaa
gggttaatgcatcttcagaaattgtggatgatacagtcccagattcaagtgatagaaagg
aatgctttcgataaccttcagtcacttgtagagatcaatctggcacataacaatctaaca
ctgctgcctcatgacctgttcacaccactccgcctagaaaggatccacttgcatcacaat
ccttggaactgcaactgtgatatcctttggctcagctggtggattaaagacaaggcaccc
tccaatactgcgtgctgcgcccgttgccacacacctcccagtttaaaaggaaggtacatt
ggtgagctggacctgaattacttcacatgttatgctccagtcatagtggagccaccagca
gacctcaacgtcacagaaggcatggctgcagagatgaaatgccgggcatcaacctccctg
acctctgtatcttggattactccaaatggatctgttatgacacatggggcgtacagagtt
cggattgctgtgctcagtgatggcacattaaattttacaaaggtaacagtgcaagacaca
ggtttgtatacatgcatggtgagtaactctgttgggaatactacagcttctgccacactg
aatgtgactgctctggataaccctggttacacatacttttcaactgtcacagtagagact
gtggaaccttctcaggatgaggcacagaccacagagcaggttgggcccacaccagttacc
agctgggagaccactaacatgacaacctcattcactccacagagcacaagatcaacagaa
aaaacattcaccattcctgtgacagatgcaaacaacgggatcccaggaatagatgaggtt
atgaagacaacaaaaattataattggttgttttgtggctatcactctcatggctgctgtg
atgctggtaattttctacaaaatgaggaaacagcatcaccggcagaaccatcatgctcca
acacggactgtagagatcattaatgtggatgacgagcttacaggtgacacgcccatagag
agtcacttgcccatgccagcaatagagcatgagcacctaaatcactataactcttataag
tctcctttcaaccacacaacaacagtcaacacaataaattcaatacacagttcggtgcat
gaaccgttattgatccgaatgaactcaaaagacaatgtacaagagactcaaatctaa
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