Phalacrocorax aristotelis (European shag): 142057917
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Entry
142057917 CDS
T11493
Symbol
BMAL1
Name
(RefSeq) basic helix-loop-helix ARNT-like protein 1 isoform X1
KO
K02296
aryl hydrocarbon receptor nuclear translocator-like protein 1
Organism
parx Phalacrocorax aristotelis (European shag)
Brite
KEGG Orthology (KO) [BR:
parx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
parx03000
]
142057917 (BMAL1)
Transcription factors [BR:
parx03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
142057917 (BMAL1)
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Gene cluster
GFIT
Motif
Pfam:
PAS_11
PAS
PAS_3
HLH
PAS_9
Per3-like_PAS-A
PAS_4
bHLH_INO2
PAS_2
bHLH_NCOA
bHLH_NPAS4
PAS_8
Motif
Other DBs
NCBI-GeneID:
142057917
NCBI-ProteinID:
XP_074950961
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Position
5:60728925..60784539
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AA seq
633 aa
AA seq
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MADQRMDISSTISDFMSPDPADLISSSLSTSGMDCNRKRKGSSTDYQLDGFPFEEGMDTD
KDDQHGRLEYTDQQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLT
VLRMAVQHMKTLRGATNPYTEANYKPAFLSDDELKHLILRAADGFLFVVGCDRGKILFVS
ESVFKILNYSQNDLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLPVKTDIT
PGPSRLCSGARRSFFCRMKCNRPSVKVEDKDFPSTCSKKKADRKSFCTIHSTGYLKSWPP
TKMGLDEDNEPDNEGCNLSCLVAIGRLHPHVVPQPVNGEIRVKPTEYVSRHAIDGKFVFV
DQRATAILAYLPQELLGTSCYEYFHQDDIGHLAECHRQVLQTREKITTNCYKFKIKDGSF
ITLRSRWFSFMNPWTKEVEYIVSTNTVVSTNILDSGDTAFPQLAASPHSMDSVLQAGEGG
PKRTHPTVPGIPGGTRAGAGKIGRMIAEEIMEIHRIRGSSPSSCGSSPLNITSTPPPDTS
SPGGKKILNGGTPDISSAGLLSGQIQDNSGYPYSDNSSILGENSHIGIDMIDNDQGSSSP
SNDEAAMAVIMSLLEADAGLGGPVDFSDLPWPL
NT seq
1902 nt
NT seq
+upstream
nt +downstream
nt
atggcagaccaaaggatggacatatcttctacaattagtgactttatgtcaccagaccct
gctgacttgatctccagttcccttagcacttcaggaatggattgtaataggaaaagaaag
ggaagctctaccgattatcaacttgatggctttccttttgaggaaggtatggatacagat
aaagatgaccaacatggaagattggagtatacagaccaacaaggcagaataaaaaatgca
agggaagctcatagtcaaattgaaaaaaggcgtagagataaaatgaacagttttatagat
gaactggcttctttggtaccaacgtgcaacgctatgtctcgaaagctagataaactcact
gtattgagaatggctgtccagcatatgaaaacattacgtggtgctacgaacccatataca
gaagcaaactataagcctgcttttctatcagatgatgaattaaaacatcttattctcagg
gcagcagatggatttctttttgttgtgggctgtgacagagggaagatactgtttgtttca
gaatctgtcttcaagatcctcaactacagtcagaatgatttgattggtcaaagtttattt
gattaccttcatcctaaagacatcgccaaagtgaaggagcagctctcttcttctgacact
gcaccacgagaaaggcttatagatgcaaaaactggactcccagttaaaactgatataaca
cctgggccatcacgactatgttccggagcaagacggtccttcttttgtaggatgaagtgc
aacagaccttcagtgaaagtagaagacaaggattttccttcaacatgttcaaagaagaaa
gcagaccgtaaaagcttttgcactattcatagtacaggatatttaaaaagctggccgcca
acaaaaatgggactagatgaagataatgaaccagataatgagggttgtaatttaagctgt
cttgttgcaattggacggctgcatcctcatgtagtaccacagccagtcaacggtgagatc
agggtgaaacctacagaatatgtttctcgtcatgcaatagatgggaaatttgtttttgta
gatcagagggcaacagccattctggcatacttaccccaggaacttctaggtacttcatgt
tacgaatattttcatcaagatgatataggacatcttgcagaatgtcatagacaagttttg
cagacaagagaaaaaattacaaccaactgctacaagtttaaaataaaagatggctctttt
attacgttgcggagtcgctggttcagtttcatgaacccttggaccaaagaagtagaatac
attgtctcaacaaatacagttgtttccaccaacatacttgatagtggagacacagccttt
ccacagcttgcagcttctccacacagcatggacagtgtgcttcaggctggagaaggtggc
ccaaaaaggacccatcctactgtgcctggaattccaggtggaacaagagctggggcaggt
aaaatagggaggatgattgctgaagaaatcatggagattcacaggataagaggatcgtca
ccttctagctgtggttcaagtccgctgaacattaccagcacaccaccacctgacacatcc
tccccaggaggcaagaagatcttgaatggtggcactccagatatttcttcagctgggtta
ctgtctgggcaaatccaagataactctggttacccatattctgacaactcctctattctt
ggggagaactctcatataggcatcgatatgattgacaatgatcaaggatcaagcagccct
agcaatgacgaagcagcgatggcagtaataatgagccttcttgaagcagatgcaggtctt
ggtggccctgtagacttcagtgatttgccatggcccttgtaa
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