Phalacrocorax aristotelis (European shag): 142057989
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Entry
142057989 CDS
T11493
Symbol
PPFIA1
Name
(RefSeq) liprin-alpha-1 isoform X1
KO
K26226
liprin-alpha
Organism
parx Phalacrocorax aristotelis (European shag)
Pathway
parx04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
parx00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
142057989 (PPFIA1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
parx04131
]
142057989 (PPFIA1)
Membrane trafficking [BR:
parx04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
142057989 (PPFIA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LIP-1
SAM_1
SAM_2
HWE_HK
Motif
Other DBs
NCBI-GeneID:
142057989
NCBI-ProteinID:
XP_074951099
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All DBs
Position
5:68000244..68066374
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AA seq
1223 aa
AA seq
DB search
MMCEVMPTISEAEIPSGGNGGHGSGSPLQSDADSHFEQLMVSMLEERDRLLETLRETQET
LALTQGKLHEVGHERDSLQRQLNTALPQEFAALTKELNVCREQLLEREEEIAELKAERNN
TRLLLEHLECLVSRHERSLRMTVVKRQAQSPAGVSSEVEVLKALKSLFEHHKALDEKVRE
RLRVALERCSLLEEELGTTHKELMILKEQNNQKKTIPDGMLDINHEQENTPTTNGKRSSD
GSVCHDENLAKVIELQDIIDKQNKEQTQMKERLTALSSRVTELEEDLDTARKDLIKSEEM
NTKLQRDVRETMAQKEDMEERITTLEKRYLAAQREATSVHDLNDKLENEIATKDSMHRQS
EDKNRQLQERLELAEQKLQQTLRKAETLPEVEAELAQRVAALSKAEERHGNIEERLRQME
AQLEEKNQELQRARQREKMNEEHNKRLSETVDKLLSESNERLQLHLKERMAALEDKNSLL
REIENAKKQIEELQHEKDQLLINVEALRAENDQVRLRATSLHHSRPDFRYPMTSSSVADS
HTDSYGTSSVLRRPQKGRLAALRDEPSKVQTLNEQDWERAQQASVLANVAQAFESDVDVS
DIEDDRETIFSSVDLLSPSGQADAQTLAMMLQEQLDAINKEIRLIQEEKENTEQRAEEIE
SRVGSGSLDAHGRFRSMSSIPPPYASGSLAGSSPPGSGRSTPRRIPHSPAREVDRLGIMT
LSTASREEVRDDKTTIKCETSPPSSPRSLRLDRVQKGALHTVSHEDIRDIRNSTGSQDGQ
TSNPSSSNSSQDSLHKAPKKKGIKSSIGRLFGKKEKGRPGHASKDTLGQVGMAEADSSSQ
DALGLSKLGGQAEKNRKMQKKHELLEEARRQGLPFAQWDGPTVVVWLELWVGMPAWYVAA
CRANVKSGAIMSALSDTEIQREIGISNPLHRLKLRLAIQEIMSLTSPSAPPTSRTTTGNV
WVTHEEMENLTATQQTTLAYGDMNHEWIGNEWLPSLGLPQYRSYFMECLVDARMLDHLTK
KDLRGQLKMVDSFHRNSFQCGIMCLRRLNYDRKELERKREESQNEIKDVLVWSNERMIHW
VVSIGLKEYANNLIESGVHGALVALDESFDYNALALLLQIPTQNTQARAVLEKEFNNLLA
VGTDRRLDEDDDKSFRRAPSWRKKFRPKDIRGLAAGSAETLPANFRVTTSMSSPSMQPKK
MQIDGSVSGTQRLDSATVRTYSC
NT seq
3672 nt
NT seq
+upstream
nt +downstream
nt
atgatgtgtgaggtgatgccaaccatcagtgaggcagagattccctctgggggaaatgga
ggccatggttcaggttccccgttacagtcagatgctgattcccattttgagcaattaatg
gtatccatgttggaagaaagggatcgccttctggaaacactaagagaaactcaggagacg
ctagcattgacccagggcaagctacatgaagttggtcatgagagagattccttgcagaga
cagctcaatactgcacttccacaggaatttgcagcgcttacaaaagagctaaatgtatgc
agggagcagctgcttgaaagggaagaagaaattgctgagctgaaagcagaaagaaataat
acaaggctcttactggaacatttggagtgccttgtctccaggcacgagcgatctctcaga
atgactgttgtaaagagacaagcccagtctccggcaggagtttctagtgaagtagaagtt
ctcaaagcactaaaatctttatttgaacaccataaagcccttgatgaaaaggtaagggag
aggttacgagtagcacttgaaagatgtagcttattggaagaagaactaggtactacgcat
aaagagttaatgattctgaaagagcaaaataatcagaagaaaacaattccagatgggatg
ctggatataaatcacgaacaggaaaatacaccaactacaaatgggaagcgatcctctgat
ggttctgtatgccacgatgaaaaccttgctaaagtgattgaactccaagacatcatagat
aagcaaaacaaagagcagacacaaatgaaagaacgccttactgctttgtctagcagagta
acagagctggaagaggatcttgacacagctagaaaagacttaataaaatctgaggaaatg
aatacgaagttacagagagatgtacgagagactatggcccaaaaggaagacatggaagag
agaattacaactcttgagaaacgctacctcgctgcacaacgtgaagctacatctgtgcac
gacctcaatgataaacttgaaaatgaaattgccactaaagactccatgcatcgacagagt
gaagataagaacaggcaattgcaagaacgactggaactagctgagcaaaagctgcagcag
actttgagaaaagctgaaactttgccagaggtggaagctgagctggcacagagagttgca
gcactttcaaaggctgaggagagacatggcaatatagaggaacgactgagacagatggaa
gcacagctagaagaaaagaatcaagaactgcaaagggcaagacagagagagaagatgaat
gaagagcataataagcgtttgtcagaaaccgttgataagcttctgtctgaatctaatgaa
agacttcagcttcatctcaaggaaaggatggctgccttggaagataagaattcacttctt
cgagaaattgaaaatgcaaaaaaacaaatagaggaacttcagcatgaaaaggatcaactt
ttaataaatgttgaagcattaagggctgaaaatgaccaagtgagactcagagccacatca
cttcatcatagccgaccagacttcaggtaccctatgacatcttcgtctgtggctgacagt
catacagactcctatggcacctcgtcagtgttaaggcgtccccagaaaggacgtttggca
gctctcagagatgaaccttcaaaggttcagactctgaacgagcaggactgggagcgagcc
cagcaagcaagtgtattggcaaatgtggcacaagcatttgaaagcgatgttgatgtctct
gacattgaggatgatagggagactatattcagttcagttgatctgctgtcaccaagtggt
caggctgatgctcagactttggccatgatgcttcaagaacagttggatgcaatcaacaaa
gagattagacttatacaagaagaaaaggaaaacacagagcagcgtgcagaggagattgaa
agcagagtgggtagtggaagtctggatgcccatggccggttccggtccatgagctccatt
cctcctccctatgcaagtggttcacttgctggttcttccccgcctggcagtggccgctcc
accccaaggaggattccacatagtccagctcgggaagtggacagactaggtatcatgaca
ctgtctacagcttctagagaagaggtacgagatgataaaaccacaataaaatgtgagaca
tcaccaccttcttcacctcgatctttgcgtttggacagagtccaaaagggagctttgcat
acagtgagccatgaagatatcagggacataagaaattcaacaggctcgcaagacgggcaa
acaagtaatcctagtagcagcaacagtagccaagattcccttcataaagctcccaaaaag
aaggggatcaaatcctctattggccgcttgtttggcaagaaagaaaagggacgacctgga
catgcaagcaaggatacattaggacaagttggcatggcagaagcagatagttcctctcag
gatgcattaggtctcagcaagcttggaggacaggcagaaaaaaacaggaaaatgcagaaa
aagcatgagttgcttgaggaagccagaagacaaggtttaccttttgcacagtgggatggg
cccactgtggttgtgtggttggagctctgggttgggatgccagcctggtacgtggctgct
tgccgagcaaatgtgaaaagcggtgctatcatgtcagccttgtctgatacagaaatacag
cgtgaaattggaattagtaatcctctgcacagactgaagctgaggctggccattcaggaa
atcatgtcactaacaagtccatctgcccctcccacctcaaggacgaccacgggaaatgtc
tgggtaacacatgaagaaatggaaaatcttacagccacacaacaaacgacattagcctat
ggtgatatgaaccacgagtggattggcaatgaatggctccctagtctggggctccctcag
tatcgcagctatttcatggagtgtcttgttgatgctcgaatgctggatcatttaactaaa
aaagatctgcgtgggcaacttaaaatggtggacagctttcacagaaacagttttcagtgt
ggaattatgtgcctacgaagactgaattatgatagaaaagaacttgaaagaaaacgagaa
gaaagccagaatgaaattaaggatgttcttgtctggagcaatgaaagaatgatccactgg
gtagtgtccattggtcttaaagaatacgcaaataaccttatagagagcggagttcatggt
gcacttgtggccttagatgaatcgtttgattacaatgcattagccctcttattacaaata
cccactcaaaacacacaggctcgtgctgttctggagaaggaatttaataaccttcttgct
gtgggcactgacaggagacttgatgaagatgatgataagagctttaggagagcaccttcg
tggagaaagaagtttagaccaaaggacataagaggtttagctgctggatcagcagagact
ctccctgcaaatttcagagttacaacctcaatgtcttcaccctctatgcagccaaagaag
atgcagattgatggcagtgtatcaggaacacaaagattggattctgctacagtaaggacc
tactcctgttaa
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integrated database retrieval system
