Phalacrocorax aristotelis (European shag): 142058051
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Entry
142058051 CDS
T11493
Symbol
CPSF7
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 7
KO
K14398
cleavage and polyadenylation specificity factor subunit 6/7
Organism
parx Phalacrocorax aristotelis (European shag)
Pathway
parx03015
mRNA surveillance pathway
parx03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
parx00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
142058051 (CPSF7)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
142058051 (CPSF7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
parx03019
]
142058051 (CPSF7)
Messenger RNA biogenesis [BR:
parx03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor Im (CFIm)
142058051 (CPSF7)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RSLD_CPSF6
RRM_1
RRM_7
Motif
Other DBs
NCBI-GeneID:
142058051
NCBI-ProteinID:
XP_074951239
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Position
5:complement(69582853..69594010)
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AA seq
462 aa
AA seq
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MSEGVDLIDIYADEEFNQDSEFSNADQMDLYDDVLAASSQPPESRTSSSEAPPEIRQEPS
PKPNSKSPAILYTYSGLRNKRAAVYVGSFSWWTTDQQLIQTIRSVGVYDVVELKFAENRA
NGQSKGYAEVVVASENSVHKLLELLPGKILNGDKVEVRLATRQNLSQFEAQARKRVPPRA
HSRDSVDSVDGRATPTENALPPARVEKPPSVLPFFNRPPAALPLMGLPPPPMPPPPPLSS
GFGVPPPPPGIHYQHLMPPPPRLPPHLAVPPPGAVPPALHLNPAFFPPPNAALGPPPDTY
GKAMAPYNHSSRELGPPPPPVSEVEFEEIMNRNRAISSSAISKAVSGASAGDYSDAIETL
LTAIAVIKQSRVANDERCRVLLSSLKDCLHGIEAKSYSTGASSSSSRKRHRSRERSPSRS
RESSRRHRDLLHSEDRHEDYFQERNREHERHRDRDRERDRHH
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgtccgagggggtggatctgattgatatctacgccgacgaggagttcaaccaggactct
gagttcagtaatgctgatcagatggacctgtacgacgacgtgttagcagccagctcgcag
ccccctgaaagccgtaccagcagctcagaggcacccccagagatccgccaggaaccgtct
cccaagcccaacagcaaatctcccgccatcctgtacacgtacagcgggctgcgcaacaag
agggctgccgtctacgtgggcagcttctcctggtggacaactgaccagcagctgatccag
accatccgctcggttggtgtctacgacgtagtggagctgaaattcgcagagaaccgagcc
aatggccagtcaaaagggtacgcagaggtggtggtcgcctctgagaactcggtccacaaa
ctgctggagctcctgcctggcaaaatcctcaatggggataaggtggaggtgaggctggca
acccggcagaacctgtcacagttcgaggcgcaggctcgcaaacgtgtgccgccgagagcc
cactcccgggactccgtggactcggtagacggccgcgccacgccgacggagaatgccttg
ccacctgcccgcgtggagaaacccccctccgtcctgcctttcttcaaccgcccccccgct
gccctgcccctcatggggctgcccccgccgccaatgccgcccccgccacccctttcgtcc
ggcttcggcgtccccccgcccccgcctggcatccactaccagcatctcatgcccccgccg
cctcgactgcccccgcacctggctgtgccacccccgggggctgtgccccctgccctgcac
ctcaaccccgccttcttccccccacccaacgcggccctgggtcctccaccggacacctat
ggcaaggccatggccccctacaaccacagcagccgggagctcgggccgccacctccccct
gtgagcgaagtggagtttgaggagatcatgaacaggaaccgggcgatctccagcagcgcc
atttccaaggcagtgtctggcgccagcgcaggcgattacagcgacgccatcgagaccctc
ctcacggccatcgccgtcatcaagcagtcccgtgtcgcaaacgacgagcgatgccgcgtc
ctcctctcgtccctcaaagactgtctgcacggcatcgaagccaagtcctacagcacgggc
gccagcagcagctcctccaggaaaagacaccgatctcgggagcgttctcccagccggtcc
cgcgaaagcagccggcgacaccgggacctgctccacagcgaggatcggcacgaggactat
ttccaggagcggaaccgggagcacgagcgacatcgggacagggacagagagagggaccgg
caccactga
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