Phalacrocorax aristotelis (European shag): 142058059
Help
Entry
142058059 CDS
T11493
Symbol
FEN1
Name
(RefSeq) flap endonuclease 1
KO
K04799
flap endonuclease-1 [EC:3.1.-.-]
Organism
parx Phalacrocorax aristotelis (European shag)
Pathway
parx03030
DNA replication
parx03410
Base excision repair
parx03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
parx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
142058059 (FEN1)
03410 Base excision repair
142058059 (FEN1)
03450 Non-homologous end-joining
142058059 (FEN1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
parx03032
]
142058059 (FEN1)
03400 DNA repair and recombination proteins [BR:
parx03400
]
142058059 (FEN1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
parx04147
]
142058059 (FEN1)
DNA replication proteins [BR:
parx03032
]
Eukaryotic type
DNA Replication Elongation Factors
Other elongation factors
142058059 (FEN1)
Prokaryotic type
Elongation factors (archaeal)
Other elongation factors
142058059 (FEN1)
DNA repair and recombination proteins [BR:
parx03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
142058059 (FEN1)
Exosome [BR:
parx04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
142058059 (FEN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
XPG_N
XPG_I
5_3_exonuc
5_3_exonuc_N
XPG_I_2
HHH_5
Motif
Other DBs
NCBI-GeneID:
142058059
NCBI-ProteinID:
XP_074951261
LinkDB
All DBs
Position
5:69826493..69830223
Genome browser
AA seq
380 aa
AA seq
DB search
MGIHGLAKLIADVAPGAIRENDIKSYFGRKVAIDASMSIYQFLIAVRQGAEVLQNEEGET
TSHLMGMFYRTIRMVENGIKPVYVFDGKPPQLKSGELAKRTERRAEAEKHLQEAQEAGEE
SNIEKYSKRLVKVTQQHTDECKKLLRLMGIPYVEAPGEAEASCAILVKAGKVYAAATEDM
DCLTFGSPVLMRHLTASETKKLPIQEFHLNRILQDLGLTWEQFVDLCILLGCDYCESIRG
IGPKRAVELIKEHKTIEKIVQQIDTKKFPLPENWLHKEAQKLFLEPDVVNPDAVELKWTE
PNEEELVEFMCGEKQFNEERIRNGVKKLSKSRQGSTQGRLDDFFKVTGSITSAKRKEPET
KGSAKKKAKTNSAAKTKKGK
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atgggaatccatggcctggccaagcttattgctgacgtggctcctggcgccatccgggag
aatgacatcaagtcttactttggccggaaggtcgctatagatgcctccatgagtatctac
cagttcctgattgccgtgcggcagggagctgaagtgcttcagaatgaggagggcgagacc
acgagccacctgatgggcatgttctaccggaccattcgcatggtggagaacggcatcaag
ccggtttacgtctttgatggcaagcccccgcagctgaaatcgggggagctggcaaagcgg
actgagcgccgggctgaggctgagaaacacctgcaggaggctcaggaggctggagaggag
agtaacattgagaagtacagcaagaggctggtcaaggtgacccagcagcacaccgacgag
tgcaagaagttactaaggctgatgggtatcccctatgtggaggcaccaggggaggccgaa
gccagctgcgctatcttggtgaaggctgggaaggtctatgccgctgccacagaagatatg
gattgcctgacctttggcagtcctgtactgatgcgacatcttactgccagtgagacgaag
aagctacccatccaggagtttcacctgaaccgtattctacaggatctaggcctgacctgg
gaacagtttgtggatctgtgtatcctcctgggctgtgactactgcgagagcatccgtggc
attgggcccaagcgtgccgttgagctcatcaaggagcacaaaaccatcgagaagattgtt
cagcagatagacaccaagaagttccctctgccggaaaactggttgcacaaagaggcccag
aagctcttcctagagcctgatgtggtcaaccctgatgctgttgagctgaagtggacggag
ccgaatgaagaagagctcgtcgagttcatgtgcggggagaagcagttcaacgaagagcgg
atacgcaacggtgtcaagaagctgagcaaaagccggcagggcagcacgcagggccggctg
gacgacttcttcaaggtgacgggctccatcacgtcagccaagcgcaaggagccagagacc
aaggggtcggcgaagaagaaagccaagaccaacagcgccgcaaagaccaaaaagggaaaa
tag
DBGET
integrated database retrieval system
