Phalacrocorax aristotelis (European shag): 142058399
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Entry
142058399 CDS
T11493
Symbol
ABCA4
Name
(RefSeq) retinal-specific phospholipid-transporting ATPase ABCA4
KO
K05644
ATP-binding cassette, subfamily A (ABC1), member 4
Organism
parx Phalacrocorax aristotelis (European shag)
Pathway
parx02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
parx00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
142058399 (ABCA4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
parx02000
]
142058399 (ABCA4)
Transporters [BR:
parx02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
142058399 (ABCA4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
AAA_15
SRP54
AAA_23
Motif
Other DBs
NCBI-GeneID:
142058399
NCBI-ProteinID:
XP_074951621
LinkDB
All DBs
Position
6:complement(58499136..58575571)
Genome browser
AA seq
2334 aa
AA seq
DB search
MRSTGRSDWYIYQHVNIVNFSKNKLRFLVELLWPLSLFLALVWLRKANPLYRQHECHFPN
KAMPSAGTLPWLHGIFCNMNNPCFRSPTRGEGPGVVSNYNNSILARVYKDAQEILLEAPE
IHDLGRIWEELIVMTQFMETMRTNPERIAGRGIRILDILKDGETLTSFLLEDVGLPDIVV
FQLINAQVRPEQFAYGVPSLTLKDIACSQVLLDRFIIFSSRRGLPSVHKAMCALSQESLQ
RVEDALYANVDFFKLFQLLPTVLDRNSHGVDLKTWRRVLSNVSQAVQKLARKPSVQDLLM
FLQPFVQDGRPESLGHLVSSLSDLFCGYPEEGGSRVLSFNWYEDNNYKAFLGIDSTKKKS
SYLYDNTTTPFCNALIQNLESNPLTKIAWSAVKPLLMGKILFAPDSPSVRQILKNANSTF
EELERLRLLTKAWEEVGPQLWYFFQNSLQMNMIRDSLKHPTVRDFLNSQLGAEGLTAEHI
INFLHNGSPGSREKGMADFDWRNIFSAADRGLRLLSQYLECLTLDKFEGYLDETQLTHQA
LHLLEENKFWAGVVFPDIEPTASSLPPLVKYKIRMDIDAVEKTNKIKDRYWDPGPRADPV
DDLRYIWGGFAYLQDMIEHGIIKTQTNAEVPLGVYLQQMPYPCFVDDVFMITLNRAFPIF
MVLAWVYSVSMTVKSIVLEKEMRLKEAMKNRGVTNGVIWCTWFLDSFIMMAVSTFLLTAL
IMCGQVLHYSSALLFFLFLLTFTTATIMQCFLFSTFFSKANLAAACSGVIYFTLYLPHIV
CFVWQDRMTVNVKILASLLSQVAFGFGTEYLSRYEEQGLGLQWGNIRTSPLEGDEYSFLF
SIKMMLFDSFLYGILSWYLDNVFPGDYGLPQPWYFPVQESYWLGSRNPKAEKTATADEKC
PESEGCVDQKAMEGEKNESRTKKSEEPEKPEEKSDNQGEKDGKNKQCKHKREKQPGKQGK
PKTDVQDKDEININTFFEPEPTGLIPGVCIQNLVKIFASRPKPAVDGMNITFYEGQITAF
LGHNGAGKTTTMSILTGLFPPTSGTVLIGGLDIQTHMDSIRHRIGMCPQYNILFNHLTVA
EHILFYSQLKGRSRDEAEQELEAMLEDTGLSHKRNEEAQNLSGGMQRKLSVAIAFVGEAK
VVVLDEPTSGVDPYSRRSIWDLLLKYRSGRTIILSTHHMDEADILGDRVAIISQGKLFCS
GSPVFLKNCFGSGFYLTLVRKMKTTRIGRAASLCSCGSQCSCSCSSCAHRDKEGAPEQEL
DGDLNELAEVIHHHIPEAKLIESIGQELIYLLPNKHFKHRSYASLFRELEETLDDLGLSS
FGVSDTPLEEVFLKVTAEADPGIQKAEDTQENGSTLGKTPENKPAEQTTVNTNDTSRMPV
GIAGDQNEGKGSRQYKGFELVHQQIKALLIKRFHHASRSHKDFLAQIVLPASFVLLSLIL
TVIIPPFGEYPALTLHPWIYGQQFTFFSNERPGSEQMVSLTDAFLNKPGFGNRCMKNQPL
PNFPCNNTSTAWNTPAVHPNISSLLLSEKWSPENPSPSCKCSSHKKLTMLPECPAGAGGL
PPPQRVQHSTEILQDLTHRNISDFLVKTYPSLIKGSLKSKYWVNEQRYGGISIGGRLPVL
HVSGDQVVDFLSDLGRMMNVTGGQASLASAKEMSNFLKYMETEDNIKVWFNNKGWHAMVS
FLNVANNAILRANLRTGQAPDKYGIIAVNHPLNLTKEQLSEVTVLTTSVDAVVAICVIFA
MSFIPASFVLYLIQERVTKAKHLQFVSGVSPAIYWLTNFMWDIVNYALSAGMVVVIFAGF
NKKAYTSPTNLPVLVALLLLYGWAVIPMMYPAASFFSVPSTAYVALSCINLFVGINSSAI
TFILELFENNPSLLKFNKALKNVLIVFPHFCLGRGLIDLAMNQAVTEVYARFGEEHVSNP
FQWDFVGKNLVAMAVQGVAFFILNLLMQHRLFSTRWFAETSTSPIIGEDEDVAEERKRIM
NGGNKRDILELQELTKIYAGRRKPAVDRLCVGIRPGECFGLLGVNGAGKTTTFKMLTGDT
DVTSGDAVVAGNSILTHISNVHQSMGYCPQFDAIDDLLTGREHLYLYARLRGVPAEDIKR
VAEWGIQKLGLPLYADHLAGTYSGGNKRKLSTAIALIGCPPLVLLDEPTTGMDPQSRRLL
WDSIVSVLRDGRAVVLTSHSMEECEALCTRLAIMVKGTFKCLGTIQQLKYKFGDGYIVTL
KIKAPKSGLPPDPTPAEQFIHTNFPGSLQREKHYNMLQYQICSSSLAKIFRLIISNKENL
HIEEYSVSQTTLDQVFVNFAKQQMEDEEIPLHPRAAGASREAKVSPASHQQAVA
NT seq
7005 nt
NT seq
+upstream
nt +downstream
nt
atgcgctccactggacggagtgactggtacatttatcagcatgtaaatatcgtgaatttc
tcaaagaataagcttcgttttctggtggagcttttatggcctctgtctttatttcttgcc
cttgtctggctgaggaaagctaatccactgtatcgccaacatgaatgtcacttcccaaac
aaggcaatgccatctgcaggaacactgccatggctacatggcatcttctgtaacatgaac
aacccctgtttccgcagcccaacccgtggagaaggtccaggtgttgtgtccaactacaac
aattccatccttgcaagggtatataaagatgctcaggagatcttattggaagcccctgaa
atccatgaccttggcagaatctgggaagaactgatcgttatgactcagtttatggaaaca
atgagaactaatcctgaaagaattgcaggaagaggaatacgaattctagacattttgaaa
gatggggagaccctcacttccttcctgctggaagatgttggcctcccagatattgttgtt
ttccagcttattaatgctcaagtgcgccctgaacagtttgcctatggtgtccctagcttg
actctgaaggacattgcttgcagtcaggtgctcctggaccgctttattatcttcagcagc
cgaagaggtctcccttctgtgcacaaggccatgtgtgccttgtcccaggaaagcctacag
agagttgaagatgccttgtatgcaaatgttgatttctttaagctatttcagctgcttccc
actgtgttggacagaaactcacacggtgttgacctgaagacctggaggagggtgctgtct
aatgtctcccaggcagtgcaaaagctagccaggaagccaagcgttcaggaccttttgatg
tttctgcaaccatttgtacaagatggaaggccagaatccttaggccacttggtgagctcc
ctgtctgatcttttctgtggctacccagaagaaggtggatccagagtgctttccttcaac
tggtatgaagataacaactacaaagctttcctggggattgactcaacaaagaagaaatcc
agttatctttatgataatacaaccacacccttttgtaatgcattgatccagaacttggaa
tcaaaccctttaaccaaaatagcctggagtgctgtgaagcccctgctgatgggaaaaatc
ctctttgctcctgattcaccatctgtacggcaaatcctaaaaaatgcaaactccactttt
gaggaacttgagcgcctcaggctgttgaccaaagcttgggaagaagtaggacctcagctg
tggtacttctttcaaaacagcctgcaaatgaatatgatacgtgactctctgaagcaccct
acagtgagggacttcttgaacagccaactgggtgctgaaggcttaactgctgaacacata
atcaactttctccacaatgggtctccagggagccgggagaagggaatggcagactttgac
tggcggaacatcttcagtgctgcagaccgaggtctgcgtttactcagtcagtatctggag
tgcttgaccttggataaatttgaaggttatcttgacgaaactcaactgactcatcaagcc
cttcatctgctggaggaaaacaaattctgggctggtgttgtttttccagacatagagcct
acagccagcagtcttccaccacttgtgaaatacaagatccggatggacatagacgcagtg
gagaaaacaaacaaaatcaaagacaggtactgggatcctggtccaagagctgatcctgtg
gatgatttacgttacatctggggaggctttgcatatctccaagacatgattgagcatggg
attataaagacccagaccaacgctgaagtgccattaggagtttatctgcagcaaatgcca
tatccgtgttttgtggatgatgtcttcatgatcaccttaaaccgcgcctttcccatcttc
atggtgctagcttgggtgtattcagtttccatgactgtgaaaagcatagtgctggagaag
gaaatgcgtctgaaagaggctatgaagaacaggggtgtaactaatggggtgatttggtgc
acttggttcctggacagcttcatcatgatggctgtgagcacgttcctcctcacagcactg
attatgtgcggacaagtactacattacagcagtgcacttctcttctttctattcctactg
acattcaccacagccaccataatgcagtgtttcttgttcagcaccttcttctccaaagca
aatctggcagctgcctgcagcggtgtcatctacttcaccttgtacctgccccacattgtc
tgctttgtctggcaagaccgcatgactgttaatgtgaagatcctagcaagtctgctttct
caagtagcctttggtttcggtacagaatacttgtcacgctatgaagagcaaggtcttggc
ctacagtggggtaacatcagaaccagtcccttggaaggagatgaatatagttttcttttt
tcaattaaaatgatgctttttgactcctttctctatggaatactttcttggtatcttgat
aacgtttttccaggggactatgggttaccacagccttggtatttccctgtgcaggaatct
tattggcttggctctagaaacccaaaagctgagaaaacagcaactgctgatgaaaaatgt
ccagagtcagaaggctgtgtggatcagaaggccatggaaggagaaaaaaatgaaagcaga
acaaagaaatctgaagaacctgaaaagccagaagaaaagagtgacaaccagggggagaag
gatggtaaaaacaaacaatgtaaacacaaacgagaaaaacaacccggcaagcaggggaag
cctaagacagatgtccaggacaaagatgaaattaatataaataccttctttgagcctgag
ccaacaggattgattccaggagtatgcattcagaacctggtgaagatttttgcaagcagg
cccaagccagcagtagatgggatgaatattactttttatgagggccagatcacagcattc
cttggtcacaatggagcaggaaagacaacaaccatgtccatactgacaggcctcttccca
cccacctctggaactgtgctgattggcggcctggatattcagactcacatggactccatt
cggcacagaataggcatgtgccctcagtacaacatcttattcaatcaccttactgtagca
gagcacatcttgttttattctcaactgaaagggagatccagggatgaagccgagcaagag
ttggaagcaatgctagaagacacaggcctctcccataaaaggaacgaagaggctcagaac
ttgtcaggtggaatgcaaaggaaactgtctgttgccattgcttttgtgggtgaagcaaaa
gtggtagtcttggatgagcccacttctggagttgatccctattccaggcgatctatctgg
gatcttctgctgaagtaccgctcaggcagaaccatcatcctttcaacccatcacatggat
gaggcagacatccttggagacagagtagccatcatatcccaagggaaactcttctgctcg
ggctctcctgtattcctgaagaactgctttgggtctggcttctatctcactcttgttcgc
aagatgaaaaccaccagaatcggaagggctgcatcgctttgtagctgtgggtctcagtgc
tcctgctcctgctccagctgtgcacacagggacaaagaaggagctccagagcaggaactg
gatggagatctgaatgagctagcagaagtcattcatcatcatatcccagaagcaaaatta
attgaaagcattggtcaggaactcatttatcttttgcccaacaaacactttaaacaccgg
tcttatgccagtctcttcagagagctggaggaaacgttggatgacttgggactcagcagt
tttggagtttcagacacaccacttgaagaggttttcttaaaggtcacagcagaagctgac
cctggaatacaaaaagcagaagacactcaagaaaatggttctactcttggcaaaactcct
gagaacaaaccagctgaacaaaccacagtgaacactaatgacacttcccgaatgccagta
ggcatagcaggagatcaaaatgaaggcaaagggtcccgacagtataaaggttttgagctt
gtacatcagcagatcaaagcactactcatcaaacggttccaccatgcctcccgcagccac
aaggacttcctagcccagattgttctccctgctagttttgtgctgctgtctttaatactt
acagtcattattcctccgtttggagaatatcccgccttaaccttacacccatggatctat
ggacaacagtttactttcttcagcaatgagcgtcctggcagcgagcagatggtctccctc
actgatgctttcttgaataaaccaggatttggaaatcgctgcatgaagaatcagcctctt
ccgaacttcccatgcaataatacatcaactgcctggaacacacctgctgttcatcctaac
ataagcagcctcctgctgagcgaaaagtggagccctgagaatccttcaccttcctgcaag
tgcagctctcacaagaaactcaccatgctgccagaatgccctgcaggcgcaggaggcctt
ccaccaccacagagagtgcagcacagcacagaaatccttcaagatctgacccacaggaat
atttcagattttctggtgaaaacgtatcccagtttgataaaagggagcttgaagagcaaa
tactgggtcaatgagcaaaggtatggaggaatttctataggaggaaggctcccagtcctt
catgtttctggagatcaagttgtcgattttttaagtgatcttggccgaatgatgaatgtg
acaggaggacaagcttcactggcttctgctaaagaaatgtctaatttccttaaatacatg
gaaactgaagacaatattaaggtatggtttaacaataaaggctggcatgctatggttagt
ttccttaacgtagccaataatgcaatccttagagctaacctgcggactggccaagcccct
gacaaatatggaatcattgctgtaaaccaccctctgaacctcactaaggagcaactctct
gaagtcactgtgctgaccacttcagtggatgctgttgttgccatctgtgtgatttttgcc
atgtcctttataccagctagttttgttttatacctgattcaagaacgtgtaacaaaagcc
aagcatctacagtttgtcagtggtgtgagccctgcgatctactggctaactaacttcatg
tgggacatagtgaattatgcactgagcgctggcatggtggtggtcatattcgctggattc
aacaagaaggcatacacttctccgactaatctccccgtgcttgttgccttgctgcttctg
tacggatgggcagtaattcccatgatgtaccctgccgcttctttcttcagtgtccctagc
actgcttatgttgctttgtcttgtattaatctctttgtggggatcaacagcagtgccatc
acgttcatcctggagttatttgaaaataacccgtctttgctgaagtttaataaagcattg
aaaaatgtgctgattgtcttcccacatttttgcctgggccgtggactcattgacttggcc
atgaaccaagccgtgactgaagtatatgccaggtttggtgaggagcatgtttccaatcct
tttcagtgggactttgttggaaagaacctggttgccatggccgtccaaggcgttgcattc
ttcattctgaatctccttatgcagcaccgtctgttctccacaagatggtttgctgagact
tccacgtcacctattattggggaagatgaggacgttgcagaagaaagaaaaagaattatg
aatggagggaacaaaagagatatcttagaattacaagaactgaccaagatttatgcaggt
aggcgcaagcctgcagtggacagactctgtgtgggcatccgtcctggagagtgctttggt
cttttgggagtgaatggcgctggcaaaacaacaacgttcaaaatgctgactggagatact
gatgtgacatctggagatgctgtagtggccggcaatagtatattgacccacatttctaac
gtccatcaaagcatgggatactgccctcagtttgatgccattgatgacctgctcacagga
cgagaacacctctacttatatgcacgcctgcggggggttccagcagaggacatcaagagg
gttgccgagtggggcatccagaagctgggacttcccctgtacgcagaccacctggctggg
acctacagcggcggcaacaagcgcaagctctccactgccattgcgctgataggctgcccg
ccgctcgtcttgctggatgaaccgactactggaatggaccctcagtcccggcgcctcctg
tgggactcgatcgtcagcgtgctcagagatgggcgagctgtggttctcacctcacacagc
atggaagaatgtgaagccctctgtactcgtttagccatcatggtaaaaggaaccttcaaa
tgcctgggcacaattcagcagctaaaatacaagtttggagatggctacattgtcaccctg
aaaatcaaagctccgaagtctgggctgcctccagaccctactcctgccgagcaattcata
cacacaaacttcccagggagtttgcagagagagaagcactacaacatgctgcagtatcag
atttgctcctcctctctggctaagatttttcggttaataatctccaataaggaaaacttg
catattgaagaatattctgtgtctcaaacaactttagatcaggtttttgtgaactttgct
aagcagcagatggaggatgaggaaattcctttgcatccccgtgcagctggagccagccga
gaagcaaaggtatcccctgcttcgcatcagcaggcagttgcatag
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integrated database retrieval system
