Phalacrocorax aristotelis (European shag): 142058482
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Entry
142058482 CDS
T11493
Symbol
TMF1
Name
(RefSeq) TATA element modulatory factor
KO
K20286
TATA element modulatory factor
Organism
parx Phalacrocorax aristotelis (European shag)
Brite
KEGG Orthology (KO) [BR:
parx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
parx04131
]
142058482 (TMF1)
Membrane trafficking [BR:
parx04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
142058482 (TMF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TMF_TATA_bd
TMF_DNA_bd
SlyX
ATG16
Motif
Other DBs
NCBI-GeneID:
142058482
NCBI-ProteinID:
XP_074951794
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All DBs
Position
6:6640038..6659594
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AA seq
1106 aa
AA seq
DB search
MSWFNASQLSSFAKQALSQAQKSIDRVLDIQAEESPWPDAVIPDYGDGTNSLISGGWDTS
SWGLSSNTEPQNQPVSPTAITKPVRRTVVDESENFFSAFLSPTDVQNIQKNPVVSKPPAK
SQRPKEEVKSTLKESQHPSQLEVPVTAEAEAKDSSVAGLVDLQNLDIPKEKLEEISVLKS
NAKPAESTNEVTDKKVSALNLEVPEEALNEKSRVGGDETGGAPESTSQPLNAGTKDMGPE
TKERKTEDRQSNTPSPPISTFSSGTSTTSDIEVLDHESVISESSVSSRQEAADSKSSLHL
MQTSFQLLSTSACADYNRLDDFQKMTESCCSSDAFERIDSFSVQSLDSRSVSEINSDDEL
SGRASASASVAVSPSVPKAETVDGLKNKSENLNDAPVLHAEEAEMEESGRSATPVNSEQP
DVLVATVQTVEEQVVKEETEPQQDAVEKLLEEDTEKQELKKMIDSLTEKLEKREIQLLST
SKEKARLEEAYDNLKDEMFRMKEESSSLSSLKEEFAQRIADAEKKLQLACKERDAAKKEV
KTVKEELATRLNTSETVVLLKEKEEQIKGLMEEGEKLSKQQLHNSNIIKKLRAKEKEREN
INTKQNKKIKELEEELQHLKQVLDGKEDLEKQHRDSIKQLNSVVERQEKDLAKLQAEVED
LEERNRSVQAALDSAYKELADLHKANATKDSEAQEAALSREMKAKEELGLALEKAQDEAR
QQQEALAVQVADLRLALQRAEQQSARKEDYLRQEIGELQQRLQEAESRNQELSQSVTSAT
RPLLRQIENLQATLGAQTSAWEKLEKNLSDRLGESQTLLAAAAERERAATEELLSNKIQM
SSTESQNSLLRQENTRLQAQLEVERNRLKKMENENSRYEVELEGLKDEYAKTLEDAKKEK
TLLTTQLEMEKMKVEQERKKAIFVQEAAKEKDRKSFTVETVSSTPSMSRSSSISGVDMAG
LQTSFLSQDDPHDHSFGPIATSGSNLYDAIRMGAGSSIIENLQSQLKLREGEISHLQLEI
GNLEKTRSIMAEELVKLTNQNDELEEKVKEIPKLRAQLKDLDQRYNTILQMYGEKAEEAE
ELRLDLEDVKNMYKTQIDELLKQRQN
NT seq
3321 nt
NT seq
+upstream
nt +downstream
nt
atgagctggttcaacgcctcgcagctgtccagcttcgccaagcaggcgctgtcgcaggcc
cagaagtctatcgaccgggtgctggacatccaggccgaggagagcccctggcccgacgcc
gtcatccccgactacggcgacggaacaaattctctcataagtggaggatgggatacatct
tcttggggcttaagttcaaatacagaaccacagaatcagccagtgtcgccaacagcaatt
actaagcctgtgaggaggacggtagtagatgaatctgaaaacttcttcagtgcctttctc
tctccgacagacgttcagaatatacagaaaaatccagtggtatccaaacctccagccaaa
tcgcagcgacccaaagaggaggtgaagagcactttaaaggagtctcaacaccccagtcag
ctggaagtaccagtgacagcagaggcagaagcaaaggattcctctgtagctggcctggta
gacttgcaaaacctcgatattcccaaggagaaattggaagagatttctgtgcttaaatct
aatgccaagcctgcagaaagcacaaatgaagttactgacaaaaaggtgtctgctctaaat
ttggaagtacctgaagaagctcttaatgaaaaatccagggtgggaggggatgaaacggga
ggtgcaccggagagcacttcgcagcctcttaatgcaggtacaaaagacatgggtccagaa
actaaggagcgaaagactgaggacaggcaaagcaatacaccatcacctcccattagcact
ttctcctcggggacatccacaactagtgatattgaagttctggaccatgaaagtgtgata
agtgagagctcagtaagttcaagacaagaagctgcagattcaaaatccagtctgcatcta
atgcaaacttcatttcagcttttatctacgtctgcctgtgcagattataatcgtttagat
gactttcaaaaaatgaccgagagctgctgttcctctgatgcttttgaaagaattgattca
tttagtgtacagtctttagatagcagaagtgtaagtgaaataaattcagatgatgagtta
tcaggcagggcttctgcttcagcatctgtcgctgtcagtccttctgtgccaaaggcagaa
acagttgatggcctgaaaaataaatctgaaaacttgaatgatgctcctgttttacatgct
gaggaagctgagatggaagagagtgggagaagcgcgacccctgttaattctgagcagcca
gatgttttggttgctactgtgcaaactgttgaagaacaggttgtgaaagaggagactgag
ccacagcaggatgctgttgaaaaattgttagaagaggacactgaaaagcaagagcttaaa
aagatgattgattcattaactgagaaactggagaagagggaaatacagttattaagtact
agtaaagaaaaggcacgcctggaagaagcttatgataacctaaaagatgaaatgtttaga
atgaaagaagagagcagtagcctttcatctcttaaagaggagtttgctcagcgaattgca
gatgctgaaaagaagctccagctagcctgcaaagaaagggatgcagctaaaaaggaagta
aagactgttaaagaagaattggctactagactgaatactagtgaaacagtcgtattactg
aaagaaaaagaagagcaaatcaaaggcttaatggaggaaggagaaaagctttccaaacag
cagctgcacaattccaacattattaagaaattaagagccaaagagaaagagagagaaaat
attaacacaaaacagaacaaaaagattaaggaattggaagaggagttgcagcatttaaaa
caggtacttgatggcaaggaagaccttgagaagcaacatcgagacagcattaaacaactg
aacagtgttgtagagcgacaagaaaaggaccttgctaaacttcaggcagaagtggaagac
cttgaagaacggaacagaagtgtccaggcagcacttgacagtgcctacaaggaacttgca
gatcttcataaagcaaatgctacaaaggacagtgaggcacaagaagcagccctaagtcgg
gaaatgaaggcaaaagaagagcttgggttagctctggagaaggcccaggatgaggcacga
cagcaacaagaagctttggcagttcaggtggcagacctaaggctagcgctgcaacgtgca
gaacagcagtcagcaagaaaagaagactatttacgccaggaaattggtgaactacaacag
agactccaagaagcagagagccggaaccaagaactaagtcaaagtgttacatctgctaca
cggccacttctccggcagatagaaaatctgcaagccacgctgggagcacaaacctctgca
tgggagaaattggaaaagaacctttctgacagacttggtgagtctcaaactcttctagca
gcagctgctgagagagaacgggctgctacagaagaacttctttctaataaaattcagatg
tcttctactgaatctcagaatagtcttttaaggcaagaaaacacacgtcttcaggctcag
ctagaagtggagaggaacaggttgaagaaaatggaaaatgaaaacagtaggtatgaggtt
gaactagaaggactcaaagatgagtatgcaaagaccttggaagatgcaaagaaagaaaag
acgctgctaactactcagttagaaatggagaagatgaaagttgaacaggagagaaagaag
gcaattttcgtgcaagaagcggcaaaggagaaggatcggaagtcatttacagttgaaact
gtctcaagtactccaagtatgtcacgctctagttccataagtggagttgacatggcaggt
cttcagacgtctttcctctcacaggatgatcctcatgatcactcatttggaccaatagct
actagtgggagcaatctttatgatgctataaggatgggagctggttcaagtataattgaa
aaccttcagtcccagctaaagctaagagaaggagagatttcacatctacagctggaaatt
ggaaaccttgagaaaactcgatcaataatggcagaagaactggttaaattaacaaatcaa
aatgatgaacttgaagaaaaagtgaaggaaataccaaaattacgtgcacagttaaaggac
ttggatcaaagatacaatacaattcttcagatgtacggagagaaagcagaggaggctgaa
gaactccgactggatctcgaagatgtgaaaaacatgtacaagactcagatagatgaactt
ttaaaacaaagacaaaattaa
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