Phalacrocorax aristotelis (European shag): 142058809
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Entry
142058809 CDS
T11493
Symbol
PHF2
Name
(RefSeq) lysine-specific demethylase PHF2 isoform X1
KO
K19414
lysine-specific demethylase PHF2 [EC:1.14.11.-]
Organism
parx Phalacrocorax aristotelis (European shag)
Brite
KEGG Orthology (KO) [BR:
parx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
parx03036
]
142058809 (PHF2)
Chromosome and associated proteins [BR:
parx03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
142058809 (PHF2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
JHD
JmjC
Cupin_8
Motif
Other DBs
NCBI-GeneID:
142058809
NCBI-ProteinID:
XP_074952767
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All DBs
Position
6:23768717..23861177
Genome browser
AA seq
1103 aa
AA seq
DB search
MIGGVPHLRDPRLAGPLHTVVLEGPCDGGEGGRGGQSCRHVFLALGVTGEDDGALPAVQQ
FSISDTSVKSEIKIRCVGVEEEEAPDIDIYHCPNCEKTHGKSTLKKKRNWHKHDNGQTTE
VKPVQNGSQVFIKELRSRTFPSAEDVVVKVPGIQLTTEYLEENGFAEPILVPKKDGLGLS
VPAPTFYVSDVENYVGPERSVDVTDVTKQKDCKMKLKEFVDYYYSTNRKRVLNVTNLEFS
DTRMSSFVEPPDIVKKLSWVENYWPDDALLAKPKVTKYCLICVKDSYTDFHIDSGGASAW
YHVLKGEKIFYLIKPASANISLYERWRSAANHSEMFFADQVDKCYKCTVKQGQTLFIPSG
WIYATLTPVDCLAFAGHFLHSLSVEMQMRAYEVERRLKIVSLTQFPNFETACWYMGKHLL
ETFKGLHKAGQQPPAHLLQGAKILNGAFRSWTKKQALAEHEDELPENFKPAQLIKDLAKE
IRLSESASKASKADMSANTNAEEICPVEKEEAPSPIQVTPPPPPVEKPPKKKTPKTVKTP
KQLKPSKPPKPPKPPKPPKPPKTPKVKGEGKKKGKKAKETPPPAIPNLDLLEAHTKEALT
KIETPKKGKAAKNVLSVPNKETASKQSEVEKFELREQNKSKTEAKWKYKNSKPDSLLKME
EEHKSEKMPLSGNKDNKFTFSFSNKKLLGSKGVKTQLNTSVFGSLQNFKEDKAKPVRDEY
EYVSDDGELKIDEFPIRRKKNTTKRELSFLSDKKDTVQHTPVKKPKVESVSYKSDDSSDE
DLLHIDTEAKPGRNSKVKKESGSSAGILDLLQASKEVGGLEYNTNSQPPASPSTQEAIQG
MLSMANLQSSESCLQTSWGTNQAKNNSISTQNSKKTGGGSNKNAGKRLLKKSTKNSIDIE
DYDEDQDHLDACFKDSDYVYPSLESDEDNPVFKSRSKKRKSSDDAPYSPTARVGPSVPRQ
DRPVREGTRVASIETGLAAAAAKLSQQEEQKGKKKKNTKKKLSTNNANKPAQEGSSPEPK
LESHASSLTDHEYTAGASTFGVAQPNRGSQPMAPGVFLTQRRPSSSSQNNASTKGKRTKK
GMATAKQRLGKILKIHRNGKLLL
NT seq
3312 nt
NT seq
+upstream
nt +downstream
nt
atgatcggaggtgtaccgcacctgcgagaccctcgcctggccgggccactccacacagtg
gtactggaaggcccctgtgatggaggggaaggtggaagaggagggcagtcctgccggcat
gttttccttgcgttgggtgttacgggggaggatgatggagcgttaccagcagtgcagcaa
ttctccataagcgatacaagtgtaaaaagtgaaatcaaaatccgctgtgtgggtgttgaa
gaagaagaggcaccagatatcgacatctatcattgtccaaattgtgagaagacccatgga
aagtctactttgaaaaagaaaagaaattggcataaacacgataatggccagacgacagag
gtcaaacctgtacagaacggaagccaagtctttataaaggaacttcgaagtcgtactttt
ccaagtgctgaagatgtagttgtgaaagtgccaggcatccaactaacaacagagtatttg
gaagaaaatggctttgcagagcccatcctcgtcccaaagaaggacggcctgggtttgtcc
gtacccgcacccaccttctatgtcagcgatgttgaaaactacgttggaccagagaggagt
gttgatgtcactgatgtcaccaaacagaaagactgcaagatgaagctcaaggaatttgtg
gattactactacagtacaaacaggaaaagggtcctcaatgtgaccaacctggagttctca
gacacaaggatgtccagttttgtagagcctccagatatagttaagaagttgtcctgggtg
gaaaactattggcctgatgatgctcttctggctaaaccaaaagttaccaagtactgcctg
atctgtgtgaaggacagctacacggatttccacatagattcgggaggagcttctgcatgg
taccatgtgctgaagggagaaaagatattttatctcatcaaaccagcctctgcaaatatt
tctctttatgaacgctggcgatcagcagcaaaccacagtgagatgttttttgcagaccaa
gtagataaatgttacaaatgcacagtgaaacaaggacagacactgttcatcccttcaggt
tggatttatgcaactctaacacctgtagactgcctggcctttgcaggacattttctacat
agtctaagtgttgaaatgcagatgagggcatatgaagtagaaaggcgattgaaaattgtt
agtctgacccagtttccaaactttgaaactgcatgttggtatatgggaaagcatctacta
gagacattcaaaggtttgcataaagctgggcaacagcctcctgctcatttactccaagga
gcaaaaattctcaatggtgcattcaggtcatggactaaaaaacaggctttagcagagcat
gaagatgaactaccagaaaacttcaaaccagcacaacttatcaaggaccttgccaaagaa
ataagattaagtgagagtgcttcgaaagccagcaaagcagacatgagtgccaacacaaat
gctgaggagatctgtcctgtggagaaggaggaggcaccatcacccatccaagtgacgcct
ccgcccccacctgtagaaaagccccctaaaaaaaagactcccaaaactgtgaaaactccc
aaacaactcaagccatccaaaccccccaaacctcctaagccacccaaaccccctaagcct
cccaaaacaccaaaagttaagggagaaggaaaaaagaaaggaaagaaggcaaaagagact
ccaccgccagccatcccgaatctcgacttgctggaggcacacacaaaggaggctttgaca
aagatcgagacaccaaagaaggggaaggctgcaaagaatgttttaagcgttcccaataag
gaaactgctagtaagcagagtgaggtggagaaatttgaacttcgagagcaaaataaaagc
aaaacagaagccaaatggaaatataagaacagtaaacccgattcacttctaaaaatggaa
gaggaacacaaatcagaaaagatgcctttatcaggaaataaggacaacaaatttacattc
tctttctctaataagaagttgcttggttcaaagggagtcaaaactcagctgaatactagt
gtgtttgggtcactgcagaattttaaagaagataaagcaaaacctgtacgagatgaatat
gaatatgtgtcagatgatggtgagctaaaaattgatgagtttccaatcagaaggaagaaa
aacactacaaaaagagaactctcctttttatcagataaaaaagacactgtgcagcacact
cctgttaagaagccgaaggtggagtcggtatcgtacaagagtgatgactcgtcagatgaa
gatttgcttcacattgacacagaggcaaagccagggcgcaattccaaagtaaagaaagag
agcggaagttcagcaggaattcttgatcttttgcaggcaagcaaggaagttgggggttta
gagtataacaccaacagtcagccacctgcatcacccagcacacaagaagcaatccagggt
atgctatcgatggcaaacctccagtcatcagagtcctgcctccagacatcatggggtact
aatcaggcaaagaataactccatctccacacaaaactctaaaaaaacaggtggtggcagc
aacaaaaatgccggcaagcgtttactaaagaaaagcacaaagaacagtattgacattgaa
gattacgatgaagatcaggaccacttagatgcctgttttaaagattcagattatgtttac
ccttctctcgaatcagatgaagataatccagtattcaaatcccgatcaaagaaaaggaaa
agttcagatgatgccccttacagtccaacagcacgagttggcccctcggtgcctcgacaa
gacagaccggtgcgagagggcacgagagtcgcctccattgaaactggactcgctgctgct
gccgcgaagttgtcacagcaggaggaacaaaaaggcaagaagaaaaaaaataccaaaaag
aagctgtcaaccaacaatgcgaacaaaccggctcaggaaggcagctcgccagagccgaag
ctggagtcacatgccagcagcctcacagatcacgagtacaccgcaggggccagcaccttt
ggggtcgcccagcctaacaggggatcgcagccgatggcacccggtgttttcctcacacag
aggagaccctcatcatcctcgcagaacaatgcctccaccaaaggaaagcgcacgaagaag
gggatggccacggccaagcagcggctcggcaagatcctgaagatccaccgcaacgggaag
cttctgctctag
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