Phalacrocorax aristotelis (European shag): 142058827
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Entry
142058827 CDS
T11493
Symbol
TSEN2
Name
(RefSeq) tRNA-splicing endonuclease subunit Sen2 isoform X1
KO
K15322
tRNA-splicing endonuclease subunit Sen2 [EC:
4.6.1.16
]
Organism
parx Phalacrocorax aristotelis (European shag)
Brite
KEGG Orthology (KO) [BR:
parx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
parx03016
]
142058827 (TSEN2)
Enzymes [BR:
parx01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
142058827 (TSEN2)
Transfer RNA biogenesis [BR:
parx03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing endonuclease complex
142058827 (TSEN2)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
tRNA_int_endo
tRNA_int_endo_N
Motif
Other DBs
NCBI-GeneID:
142058827
NCBI-ProteinID:
XP_074952817
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All DBs
Position
6:complement(25591610..25604211)
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AA seq
463 aa
AA seq
DB search
MAEAVFHPPRRKRRVFESYESPFPVDVGGKDFRICQAEIINNNVIVRNPEDIEQLYNKGY
FGKGILSRSRPTYSISDPLLVTKWQGANLNMPIIASKKYQRHVQWAKSILQEQGFDDCSV
TKILENYTKPLELPFLEEGGAEQTSNSCHRMGPNTENTELSRQSSTDTGNVVAQSPENQN
EGYNEACLEGDPAFDPVVVCGSKEQEQGDLKDVAEVSCQKHSFLVHCGCQAKESTEQRSC
EMIKSKECAPEYVLVQEEEGGSLRPEDGSARAQENLVKKEKLVCRRNPFRIFEYLQLSLE
EAFFLVYALGCLSIYYGEEPLTILKLWEVFSEVKPNFKTTYMAYHYFRSKGWVPKVGLKY
GTDLLLYRKGPPFYHASYSVIAELVDDNFEGSLRRPLSWKALSGLNRTTVNASKELMLCY
LIRPSDMTEKEMSTPECMKRIKVQELIVTRWVSSRERSEQDEL
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atggcagaagcagtttttcatcccccaagaaggaaaagaagagtttttgagtcatatgag
tctccctttcctgtggatgtaggtgggaaggatttcagaatatgccaggctgaaatcatt
aacaacaatgttattgtgaggaaccctgaagatattgaacagctttataacaagggctat
tttggcaaaggtatcctttcaagaagtcgaccaacatacagcatttcagaccctttactg
gttactaagtggcaaggtgctaacttaaacatgcctataattgcatctaaaaagtaccag
cgtcatgttcagtgggctaaaagtattttgcaagagcaaggatttgatgattgctcagtt
accaaaattcttgaaaattacactaaacctcttgagctgccatttttggaagagggtgga
gctgaacaaaccagtaatagttgccacagaatgggcccaaatacagaaaatacagaactt
tccagacaatcttctacagacactggcaatgtagtagcccaaagtcctgagaatcagaat
gaaggctacaatgaagcctgtttggaaggagatccagcgtttgatcctgtggtcgtatgt
ggctctaaagaacaggagcaaggtgacttgaaagatgtagctgaagtgtcttgccagaag
cacagttttctcgtgcattgcggctgccaggctaaggagagcactgagcaaaggtcttgt
gagatgatcaagtcaaaagaatgtgctccagaatatgtattggtgcaagaggaagaagga
ggtagtttacgtcctgaagatggctctgctcgtgcgcaagaaaatcttgtcaagaaggaa
aaactagtatgcagaagaaatccatttaggatttttgaatatttacagctcagcttggaa
gaggcttttttcttggtgtatgctctgggatgtttaagtatttattatggtgaggagccc
ttaactattttgaagctatgggaagttttcagtgaagtgaagcccaattttaaaactact
tacatggcatatcactacttccgcagtaagggttgggtccccaaagtcggactgaagtat
ggaactgatctcttgctgtatcgaaaagggccccctttctatcatgcaagttactcagtc
attgctgaattagttgatgataattttgaaggttctcttcgcagaccactcagctggaag
gccttgtctgggttgaacagaacaactgttaatgcttctaaggaacttatgttatgctac
ttgattagaccatctgacatgactgaaaaagagatgtcaacaccagaatgcatgaaaaga
atcaaggttcaggaactgattgtaactcgttgggtttcttcccgtgagcgcagtgagcaa
gatgaactttga
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