Phalacrocorax aristotelis (European shag): 142058879
Help
Entry
142058879 CDS
T11493
Symbol
TNN
Name
(RefSeq) tenascin-N
KO
K06252
tenascin
Organism
parx Phalacrocorax aristotelis (European shag)
Pathway
parx04510
Focal adhesion
parx04512
ECM-receptor interaction
parx04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
parx00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
142058879 (TNN)
04518 Integrin signaling
142058879 (TNN)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
142058879 (TNN)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
parx00536
]
142058879 (TNN)
Glycosaminoglycan binding proteins [BR:
parx00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
142058879 (TNN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fibrinogen_C
fn3
EGF_TEN
Fn3_Dep-1_3rd
FN3_DSCAM-DSCAML_C
EGF_Teneurin
Pur_ac_phosph_N
EGF_2
Fn3_Dep-1_4th
DUF4998
Fn3_Dep-1_2nd
Interfer-bind
CRLF2-like_D2
Fn3_VIN3
EGF_Tenascin
DUF7949
MtxA_IG-like
TSC22
Ig_ILCR1
Motif
Other DBs
NCBI-GeneID:
142058879
NCBI-ProteinID:
XP_074952935
LinkDB
All DBs
Position
6:30876334..30909721
Genome browser
AA seq
1035 aa
AA seq
DB search
MDFQSWLAFPMGVLLCCAVQMSAIQQPASHNCTTDGQGISFSHSYKIDLPTSSQIKVEAD
PLQHEDNKVQLDPGEAEENEEQNIIFRHNIHVHTPKGHCETLTHIKGLLERMEKLEKEVA
ELREVCSPQKCCGGSQGVPHCKGRGTLLYETCSCKCAEGWEGSDCSRPTCPSHCSGHGRC
DGGKCICDEPYFGEDCGQQLCPENCSGNGICDVAKGVCQCYQEFTGEDCSEKRCPGDCSG
NGFCDTGECYCHDGFFGLDCSQVLAPQKLQLLNSTENSLAVSWHHMIDVDNYVISYYPVG
YETLVTRVHAPKEQLSYEIVGLRPGTTYNVTLRHVKKGIASEPKYLEASTVLSVLNAIWV
TDEMEHSLEVEWENPPKGVDYYKLKFRPLLEMDEKQVMVPKSNDQTSRHIMTGLKPGTEY
EVTIIPVKDDTEGKPSSVSGRTGLDSPTNVATDRVTEDTATVSWNKVEAPIDRYVVRYTS
ANADIKEIEVGSENDSITLLDLKPGVEYVIQMWAEKGPQQSKKTSTKAVTEIDSPTELST
DQVTEDAITVSWNKVQASIDRYRVSYTSANGDTEEREVEKDKNVTTLAGLKPGVEYVIYI
WAEKGEQKSKRASTEAVTEMDSPKNLVTDHVTEDSATISWDGVQAPIDKYMVSYASADGD
AKEIEVGKDRSATTLTGLKPGMKYTIHLWAELGSKHSKTVSIDTLTEIDPPKNLHVSDVT
HSTGIVTWTPPAAQIDGYALTCQGRDGTSKEVRLGPSGQQFVLEGLEQGVRYAIFVMAYK
GDRQSIKTRSTFSTVSFLYPYPADCSQMQQNGNASSSMYTIYLNGDGSRPMQVYCDMTTD
GGGWIVFQRRSTGKLDFYKRWKNYVEGFGDPTGEFWLGLDKLHNLTSSSPIQYELRVDLQ
TATESVYAVYDFFQVASSKERYRLSVGNYRGNAGDAMTYHNGWKFTTWDRDNDVSLSNCA
LTHHGAWWYKNCHLANLNGKYGETKHSEGVNWEPWKGHEFSIPFTEMKIRPQSSRNKPVL
GRKKRSQGRGRSGLN
NT seq
3108 nt
NT seq
+upstream
nt +downstream
nt
atggatttccagagctggcttgccttcccaatgggagtattgctgtgctgtgctgttcaa
atgtctgccattcaacaacctgcatctcacaactgcaccactgatggtcaaggaatatcc
ttcagccactcctacaagattgacctgcccacatcctcccagattaaggtggaggcagat
ccattacagcatgaagacaacaaggtgcagctagatcctggggaggctgaggaaaatgaa
gagcagaatattatctttaggcacaacatacatgttcatacacccaaagggcactgtgaa
actttgacccacattaagggtctgcttgagaggatggagaagctggagaaagaagtggca
gagctgagagaagtctgcagccctcagaagtgctgtgggggaagccaaggtgtcccacat
tgcaagggccgtgggactttgctctatgagacttgcagctgtaagtgtgccgagggctgg
gagggaagcgactgctcccgccccacctgccccagccactgcagtggccatgggcgctgc
gatggtgggaagtgtatctgcgacgagccttactttggtgaggactgcggccagcagctc
tgtcctgagaactgcagcggcaacggcatctgtgacgtagccaaaggggtctgccagtgc
taccaggagttcactggggaggactgcagcgagaaacgatgtcccggggactgcagtggc
aatggattctgtgatacaggagagtgctactgccatgatggcttctttggccttgactgc
tcccaggtgcttgctcctcagaagctgcagctgctgaactccactgagaactctctggct
gtcagctggcatcacatgattgatgtggataattacgtaattagctattatcctgtagga
tatgagacactggtgacacgagtccatgcgcccaaagagcagctcagctatgagattgtg
gggctccgccctggcaccacatataatgtcacgcttcgtcacgtgaagaaggggattgcc
agtgagcccaaatatctagaagcaagtacagtcctgtctgtactcaatgccatctgggtg
acagacgagatggagcattccctggaagtggagtgggagaacccaccaaaaggtgtggat
tattacaagctgaagttcagacccctgctggagatggatgagaagcaggtcatggtgccc
aaaagcaatgaccagacgagcagacacatcatgactggcttgaaacctggcacagaatat
gaggtcaccataatacctgtgaaagatgatacagaggggaaaccatcctcagtgagtggt
aggactggacttgatagcccaaccaatgtggcaactgaccgagtgacagaggatacagcc
actgtctcatggaataaagttgaggctcccatagacaggtacgtggtgaggtacacctca
gccaatgcggacatcaaggaaatagaggtggggagtgaaaatgacagcatcaccttactg
gatctgaagccaggcgtggaatatgtcatccagatgtgggcagagaagggaccccagcag
agcaagaagacaagcaccaaagccgtgacagaaatcgacagcccaactgagctgtcaacc
gaccaagtgacagaggatgcaattactgtttcctggaacaaagtccaggcttcaatagac
aggtacagagtgagctacacctcggctaatggggacacagaggagcgagaggtggagaaa
gacaagaatgtcactaccttggcaggactgaagccaggcgtggagtatgtcatttacatc
tgggcagaaaagggagaacaaaagagcaagagggctagtactgaggctgtgacagaaatg
gacagcccaaagaatctggtaactgaccacgtgacagaggactcagccaccatctcctgg
gatggtgtccaagcacctatagacaagtatatggtgagctatgcttctgctgatggggat
gccaaggaaatagaagtggggaaggacaggagtgctaccaccctgacaggactgaaacca
ggcatgaagtacaccatccatctctgggcagagctggggagcaagcatagcaagacagtg
agcattgacacactgacagagattgatcctcctaagaacctccatgtatcagatgtgact
cattctactggcatagttacctggactcctcctgcagcacagattgatggctacgctctg
acctgtcagggtcgtgatggcacgagcaaggaagtacgactgggtcctagtggacaacag
tttgtgctggaaggactggaacaaggagtgaggtatgccatctttgtgatggcctataag
ggagatcgccagagcataaagacacgcagtaccttctcaacagttagctttctctaccca
tatcccgcggactgcagccagatgcagcagaacggaaatgcctccagcagcatgtacacc
atctacctgaacggggatggcagcaggccgatgcaggtgtactgtgacatgaccactgat
ggaggtggctggatagtgtttcagaggcggagcactggcaagctggacttctacaaacgc
tggaaaaattatgtggaaggctttggagatcccacaggggaattctggcttggtcttgac
aagctgcacaatctcacaagcagcagccccatccagtatgagctccgggtggatttgcag
acagccaccgaatctgtctacgctgtctatgacttcttccaggttgcctcgagcaaggaa
agatacaggctgtcagtggggaattacagaggcaatgctggggatgcaatgacctaccac
aatggctggaagttcacaacgtgggacagagacaatgatgtgtctctcagcaactgtgct
ctgacacaccatggtgcatggtggtacaagaactgtcacttggccaacctcaatgggaaa
tatggggagaccaagcacagtgagggggtgaactgggagccatggaaaggccatgaattc
tccatcccttttactgagatgaagatccgtcctcagtcttcccgtaataagccagtcctg
gggaggaagaagaggtctcagggaagaggaagatcaggcttaaactga
DBGET
integrated database retrieval system
