Phalacrocorax aristotelis (European shag): 142058886
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Entry
142058886 CDS
T11493
Symbol
SEC16B
Name
(RefSeq) protein transport protein Sec16B isoform X1
KO
K20353
COPII coat assembly protein SEC16
Organism
parx Phalacrocorax aristotelis (European shag)
Brite
KEGG Orthology (KO) [BR:
parx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
parx04131
]
142058886 (SEC16B)
Membrane trafficking [BR:
parx04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
142058886 (SEC16B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_Sec16
Sec16
Motif
Other DBs
NCBI-GeneID:
142058886
NCBI-ProteinID:
XP_074952952
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All DBs
Position
6:complement(31479646..31500148)
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AA seq
1029 aa
AA seq
DB search
MDPWAPAQLPHPWERQAAQGAWGEAHCGPPPQPRGQLLHMGPPPRPGSWDGSHLSGHPWD
EGQHPQRDARRPASQAEYYESSFPNRLYSRQGYEDPRWQYPAASYGDSYTYQSHQQQPVT
WQDNRDLRQGKPYSKSTNYQDQHYYKGYHPNLATAALGQDRTQTYGSCEDSYISTDRRER
AGGETLGSDSGKAGGQLREPLGQPSLLLQYRESGLSSSSYELSQYIHDGADNYESMLSGT
WSPAQAGGPLVSTPAPVVPLKFSLPHVVVCFGARGQLVLVCPHRPTEGQLAHVELHSLEV
ILQDMKELEELQAFPGPLAREDLHKVDVMTFCQQKIATNCDLSTQRGRDSALLWKLLVLL
CQQNGSMVGSDTAELLMQDCRHQEKYKRQNPAANLIGLMDDEWMSCQTGTLDLITGEVPP
VVETQAQIVEKFTKLLYYGRKKDALVWAMRNQLWGHALFLSSKMDPRTYSWVLNGFTSTL
ATNDPLQTLFQLMSGRIPQAALCCGDATWGDWRPHLAAMLSNKVGDMALNHQAIITMGDT
LADKGAVEAAHFCYLMADIPFGYFGVKEDRMALLGSSHRQAFTQFARTEVIQRMEIFEYC
QQLRQPKFFLLPFQVYKLLYASRLADYGLPAQALQYCEQIATVLLGQDPTTHPVLAQQVM
KLAERLKLSDPLLLEMPEQDQTLEPDWLVELRACCQEWEVEDDLPPEVGPAQPGLSWAAA
SMADGGPHHELLQSEGYQHDQWYEAMPPQGPISHEDASLQPPAPAQVTASPLLSVRQELQ
APTLGPEPATPLGGVFAEPPPQVVPPAGGAGEPQGARFSPEGVQPSLSAEQEELKERART
ISEGSTISLDDDSQPSSESAGEDAAEDPAPAEVVKPGEDKSSGFRWFGWFRSKPTKETPP
RAMPEVAPDSPTLGLQEQTSPSPPDAPVTAGTRPLAQPPSQNPGGMQGENIFPVTPVSVG
MKGSWDAGGGETAGEQFLCLHPFQPSFHQSTPLVGTIPLFNPAQVSQLSAASRPNQPRLF
SQRRYPNPL
NT seq
3090 nt
NT seq
+upstream
nt +downstream
nt
atggacccctgggcccctgcccagctgccccacccctgggagaggcaggcagcccagggg
gcatggggagaggcacactgtggccccccacctcagcccaggggtcagctgctccacatg
ggacccccacctcggcctggatcctgggacgggagccacctctctggccacccctgggat
gagggccaacacccccagagggatgcccgcagaccagcttcccaggcggagtactatgaa
agcagcttccccaacagactatactccaggcaaggatatgaagaccctcgctggcagtat
ccagcagccagctacggggatagctacacctaccaaagccaccagcagcagccggtgacc
tggcaggataacagagacctgagacagggaaagccttatagcaagagtaccaattaccag
gaccagcactactacaagggctaccatccgaacctggccacagccgccctggggcaggac
aggacccagacctatggctcctgtgaggacagttacatctccactgacaggagggagcgg
gcagggggagaaaccctcggcagcgattcagggaaggctggtggccagctccgagagccc
ttgggccagcccagcctgcttctgcagtaccgcgagtcagggctcagctccagcagctac
gagctcagccagtacatccatgatggtgccgacaactatgaatccatgctttcagggacc
tggagcccagcacaagcaggggggcccttggtgtccaccccagccccagtggtacccctc
aagttctcgctgccacacgtggtggtgtgctttggagccagaggccagctggtgctggtg
tgtccccaccgtcctaccgaggggcagctggcccacgtcgagctacacagcctggaggta
atccttcaggacatgaaagagctggaggagctacaggccttcccagggcccctggccagg
gaagatctgcacaaggtggacgtgatgacattttgccagcagaagatagccacaaactgt
gatctctcaacacagagaggcagagattcagctcttctctggaaactcctggtcctcctc
tgccagcagaatgggtccatggtgggctcagacacagctgagctgctgatgcaagactgc
aggcaccaggagaagtacaagaggcaaaaccctgcagcaaaccttattggcctgatggat
gatgagtggatgtcatgtcagacggggacgctggacctcatcacaggggaggtccctcct
gttgtggagacacaggcacagatagtggagaagttcaccaagctcctctactatggcagg
aagaaagatgctctcgtctgggccatgagaaatcaactgtggggccatgccctcttcctc
tctagcaagatggaccctcggacctacagctgggtgcttaatgggttcaccagcacgctg
gctaccaatgaccccctgcagaccctcttccagctcatgtcaggaagaatccctcaggca
gcactgtgctgtggggatgccacatggggagactggagaccccacctggctgcaatgctg
tccaacaaggttggagacatggcgctgaaccaccaagccatcatcaccatgggagacact
ctggctgacaagggagcagttgaagcagctcatttctgctacctaatggcagatattcct
tttggttactttggggtgaaagaagaccgcatggctctgctgggtagcagccaccgtcag
gcattcacccagtttgccaggacggaggtcatccagcggatggaaatctttgagtactgc
cagcagctacgacagcccaaattcttcctgcttcccttccaggtgtacaagctcctctac
gcctctcgcctggctgactatgggctcccagcccaggccctgcaatactgtgagcagatt
gccactgtgctcctgggccaggatccaaccacccaccctgtcctggcccagcaagtgatg
aagctagctgagcggctgaagctctctgatccactgctcctggagatgccggaacaggac
cagacgctggagcctgactggctggtagagctccgagcctgctgccaggagtgggaggtg
gaagatgacctccctccagaggtgggacctgctcagccagggctctcctgggctgctgca
tcgatggcagatggagggcctcaccatgagcttctgcagagtgaaggctaccagcatgac
cagtggtacgaggccatgccaccccagggacccatctcccatgaggacgcgtccctccag
cctccagcccctgctcaggtcacagcatcgccactgctcagtgttcggcaagagctgcaa
gcccccacacttggcccagagccggccacccctctgggaggggtttttgctgagccccct
ccacaggtggtgccacctgcaggaggagctggggagccccagggtgcccggttctcccca
gaaggggtgcagccatccctctcagcagagcaggaggagttaaaggaaagggctcggacc
atctcagagggttccaccatctccttggatgatgacagccagccttcctcagagagcgca
ggtgaagatgctgctgaagatccggcaccagcagaggtggtgaagccgggtgaggataag
agctccggattcaggtggtttggctggtttcggtcgaagcccaccaaggaaacacctccc
agagccatgcctgaggtggccccagactcccccactctgggactgcaggaacagacatca
ccatccccacctgatgctccggtcacagctgggacaagacctttggctcagcctccctcc
caaaaccctggaggaatgcaaggtgaaaatatctttcctgttactccagtgtctgttggg
atgaaaggctcgtgggatgcaggtggtggggagacagcaggagagcagtttctttgcctt
caccccttccagcccagcttccatcaatctaccccactggtggggacaatccccctcttc
aaccctgcccaggtgtctcagctctctgctgcctctcgaccgaaccaacccaggctgttt
tcccaacggcgctatcccaacccgctgtga
DBGET
integrated database retrieval system
