Phalacrocorax aristotelis (European shag): 142059027
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Entry
142059027 CDS
T11493
Symbol
MSH4
Name
(RefSeq) mutS protein homolog 4 isoform X1
KO
K08740
DNA mismatch repair protein MSH4
Organism
parx Phalacrocorax aristotelis (European shag)
Brite
KEGG Orthology (KO) [BR:
parx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
parx03036
]
142059027 (MSH4)
Chromosome and associated proteins [BR:
parx03036
]
Eukaryotic type
Meiosis-specific proteins
Others
142059027 (MSH4)
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Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_III
MutS_II
MutS_IV
MutS_V
nSTAND3
AAA_14
nSTAND_NTPase5
ATPase_2
AAA_23
Motif
Other DBs
NCBI-GeneID:
142059027
NCBI-ProteinID:
XP_074953356
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All DBs
Position
6:complement(38620229..38648110)
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AA seq
848 aa
AA seq
DB search
MRGRPWPPPFCEEVYFAAGGACAGRGGDVETEQRGGGRGAGSRFRRLAVLYRPRLFHAGA
GRASGGGAPLYPGAAADAAQHGEQHRRLVQRRAEAAQLQRGRPRCPPGCWWWRGKAAASR
TRSKMIYHLMCLFSKVNVPPASGSYFGDRSSCIENASTLNFTSSSVRGLNSTCVGKTPLS
SSRSLCRSHTPLMGYSVTSSSTASAHSAASVIVAVVEGRGLARGEVGMASIDLKNPEMIL
SQFADNTTYAKVITKLKILTPLEIIMSNTACDAGNTSKLFSLITEHFKNVTFTTVQRKYF
NETKGLEYIEQLCASEFSTIFMEVQSKYYCLAAAAALLKYVEFIQNSVYAPKSLKVRFQG
SEKTAMIDSSSAQNLELVINNRDSRNGHTLFGVLNYTKTPGGSRRLRSNILEPLVDVETI
NTRLDCVQELLQAEELFFGLQAVISKFLDTEQLLSVLVQIPKQDTVKTAESKITNLIYLK
HTLELVEPLKAALRSCNTPLLKAYYNSLEDTRFGIILEKITTVINDDTRYTKGCLNMRTQ
KCYAVKPNINEFLDIARRTYTEIVDDIAGMITQLAEKYNLPMKTSFSSARGFFIQMSVDC
SALPNGQLPSEFTKVTKMKNTYSFTSADLIKMNERCQESLREIYHMTYLIVCKLLNEIYE
HIHCLYKLSDIVSMLDMLLSFAHACTLSDYVRPEFTDTLAIKQGWHPILEKIAMEKPVSN
NTYLTEGNNFVIITGPNMSGKSTYLKQIALCQIMAQIGLKAAEVSSLPSSVILDAKEITN
HIAKQVLHRQKSTPEVMKQRAVYHLAMRLVQTARNSRLDPDSLRIYLKGLKKKYEASCPA
AGQNDEQQ
NT seq
2547 nt
NT seq
+upstream
nt +downstream
nt
atgcgcggcaggccgtggccgccgccattttgcgaggaggtgtattttgcggcgggcggg
gcctgtgcggggcggggcggcgatgtcgaaaccgagcagcgaggcggaggccggggggcg
ggaagccgcttccgccgcctcgcagtcctatacaggccgcggctcttccacgccggggct
gggcgggcgagcggaggcggcgccccgctataccctggggctgctgcagacgccgcgcag
cacggcgagcagcaccggcgacttgtccagcggagggccgaggccgcgcagctccagcgg
ggaaggcctcgctgcccgccgggctgctggtggtggcggggtaaagccgccgcttcccgg
accaggagtaaaatgatctatcacttaatgtgtctgttttcaaaagttaatgtccctcca
gcctcaggatcttattttggggacagaagttcttgcatagaaaatgctagcacgttgaat
ttcacgagttcttctgtgcgaggcctgaatagcacatgtgtaggaaaaacacccctctct
tctagtagatctctttgcagaagccatacccctcttatgggatattcagttacatcctca
tctacagcctcagctcatagtgctgcatcagttatcgtagctgtagtagaaggaaggggc
cttgccagaggggaagtaggaatggccagtattgacttaaaaaatcctgagatgatcctg
tcacaatttgcagacaatacaacttatgccaaggttattactaaactcaagattttaaca
ccactagaaataataatgtcaaacactgcttgtgatgcagggaacacatcaaaattgttc
agtctgataacagaacatttcaagaatgtgacttttacaactgtccaaagaaaatacttc
aatgaaacaaagggtttggaatacatagaacaattgtgtgcatctgaattcagcaccatt
ttcatggaggttcaatcaaagtactactgtcttgcagctgctgcagctttgctaaaatac
gttgaatttattcaaaattcagtttatgctcctaaatcacttaaagtgcgtttccagggg
agtgagaaaacagctatgatagattcatcatcagcacaaaatcttgaactagtaattaat
aacagagattctcggaatggtcacacactttttggtgtcctaaattacactaaaactcca
ggtggaagtcgaagacttagatccaatatcctggagccactagttgatgtggaaacaatt
aacacaagactggactgtgttcaggaattactccaggctgaggagctcttttttggtctt
caagcagttatctcaaaattcctggatacagaacaactactttcagttttggtacaaatt
ccaaagcaggatacagttaaaactgctgaatcaaaaataactaatttaatttacctgaag
catactctagaacttgtggagcctctaaaagctgctttaagaagctgtaacacaccgctg
ctaaaggcttattacaattctcttgaagatacaagatttggaattatacttgaaaagatt
acaactgtaattaatgacgacacaaggtacacaaaaggatgtctgaatatgaggacccag
aaatgctatgctgttaagcctaacatcaatgaattccttgatatagctcgtagaacatac
accgaaattgttgatgacatagcaggtatgataacacaacttgcagagaagtacaaccta
ccaatgaaaacaagtttcagctctgctcgtggattttttatccagatgagtgttgattgt
tcagcattacccaatggccagcttccttctgaatttacaaaggttactaaaatgaagaac
acatatagcttcacttcagcagatttaataaaaatgaatgaaagatgtcaggagtccctg
agagaaatatatcacatgacctacttaatagtgtgtaaactgctgaacgagatctatgaa
cacattcattgcctatacaagctgtctgacattgtgtcaatgctggatatgctgctttca
tttgcccacgcctgcactctttctgattatgttcgtccagaatttacggacactttagcg
atcaagcaaggatggcatcccattcttgaaaagatagctatggaaaaacctgtgtctaac
aacacgtatctgacagagggtaacaattttgtcattattacaggaccaaatatgagtgga
aaatcaacatacctgaaacagattgctctctgtcaaattatggcacagattggattaaaa
gctgcagaagtttcctccctaccatcatctgtaattttggatgcaaaggaaatcacaaat
catatcgcaaaacaagttttgcacaggcagaagagcactcctgaggtgatgaaacagaga
gctgtataccatttagcaatgagattggttcagactgccagaaattctcggttggatcca
gacagtttgcgtatatacttgaaaggcttgaagaaaaagtatgaagccagttgtcctgca
gccggacaaaatgatgagcaacagtaa
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