Phalacrocorax aristotelis (European shag): 142059268
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Entry
142059268 CDS
T11493
Symbol
PIF1
Name
(RefSeq) ATP-dependent DNA helicase PIF1
KO
K15255
ATP-dependent DNA helicase PIF1 [EC:
5.6.2.3
]
Organism
parx Phalacrocorax aristotelis (European shag)
Brite
KEGG Orthology (KO) [BR:
parx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
parx03032
]
142059268 (PIF1)
03029 Mitochondrial biogenesis [BR:
parx03029
]
142059268 (PIF1)
Enzymes [BR:
parx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
142059268 (PIF1)
DNA replication proteins [BR:
parx03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
142059268 (PIF1)
Mitochondrial biogenesis [BR:
parx03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial DNA replication factors
Mitochondrial DNA maintenance factors
142059268 (PIF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PIF1
Pif1_2B_dom
PH_LRR1
AAA_30
AAA_19
AAA_22
UvrD_C_2
Viral_helicase1
Herpes_Helicase
Mg_chelatase
ABC_tran
AAA_16
AAA_7
PhoH
T2SSE
Motif
Other DBs
NCBI-GeneID:
142059268
NCBI-ProteinID:
XP_074953983
LinkDB
All DBs
Position
6:51942347..51951999
Genome browser
AA seq
604 aa
AA seq
DB search
MEDAELRCTVAVEQPLPGGEAPRRRLMRGAMVLLGRNELRQPVLRVVGNGGAAVLSFVLA
GDTVRLFTRFAGDGRAAVRVGPSGAQVLLSDCPPDALRRFLRLLRLKVAAGPRGARRLPR
LLDRPPPAFAVISPLQERDLLRGPGRPHGGEARGERPAEVARAERRPPARLSAEQEAVLG
AVRSGKSIFFTGCAGTGKSFLLKKIVGSLPPKSTYATASTGVAACHIGGTTLHAFAGIGS
GKAPLEQCIQLAERPGVRQHWLACQHLIIDEISMVDGKFFDRLEAVARAVRKRDEPFGGI
QLIICGDFLQLPPVCKANEETKFCFQAKSWRKCIHINMELTEVWRQTDKTFVSLLSAVRL
GRCTEEVTRLLMQTAANRSERDGILATRLCTHKDDVAITNERYLQQLSGELYTFGALDSD
PMLVKLIDAQCPVGGRVELKLGAQVMLAKNLDVSQGLVNGARGVVVGFESEQKGLPKVRF
LCGVTQVIKMEKWVFKGPSGVYLSRQQLPLKLAWAISIHKSQGMSLDCVEISLSRVFESG
QAYVALSRARSLAGLRVLDFDPKVVRADPSVLEFYRQLRRHQLLPQDSLHTHSGADEKEN
WKCS
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
atggaggacgcggagctgcgctgcaccgtggccgtggagcagccgctgccgggcggagaa
gccccgcggcgccgcctgatgcggggcgcgatggtgctgctgggccgcaacgagctgcgg
cagccggtgctgcgagtggtcggtaacggcggggcggcggtgctgagcttcgtgctggct
ggtgacaccgtgcggctcttcacgcggttcgcgggcgacgggcgggcggccgtgcgggtg
gggccgagcggcgcccaggtgctgctgtccgactgtcccccagacgcgctgcgccgcttc
ctccgtctcctgcggctgaaggtcgccgccgggccgcggggcgcacgccgcctcccccgc
ctgctggaccggccgccgccggccttcgccgttatcagcccgctgcaggagcgagacctg
ctgcgcggccccggccgcccccacggcggcgaggcgcggggagagcgccctgccgaggtg
gcccgcgcggagaggcgacccccggcgaggctctcggcggagcaggaggcggtcctgggc
gccgtgcggagcgggaagagcatcttcttcaccggctgtgcagggactgggaagtcgttc
ctgctgaagaagatcgtgggatccctcccacccaagagcacatatgctacagccagcacg
ggagtggcggcttgccacatcggtggcaccactctccacgcctttgcagggatcggctct
gggaaggcacctctggaacagtgtattcagctggcggagaggcctggggtgcgccagcac
tggctggcctgccagcacttaattattgatgagatctcaatggtggacggcaagttcttt
gacaggctggaggcggtggcgagggcagtcagaaaacgggatgagccttttggaggaatt
cagctgatcatctgtggggacttcttgcagctacccccagtctgcaaggctaatgaagaa
accaagttctgcttccaggcaaaaagctggaggaaatgcatccacataaacatggagctg
accgaagtgtggagacagactgacaagacctttgtctcgctcttgagtgcagtccgctta
ggcaggtgcacagaggaggttaccagactgttgatgcagactgctgctaacaggtctgag
cgtgatgggatcctggctacgcggctctgcacccataaagatgatgtagcaataactaac
gagagatacttgcaacagctatcaggagaattgtacacttttggggctttggacagtgac
ccaatgctagtgaagttaatcgatgctcagtgtcctgtgggtggtagagttgagctaaag
cttggagcccaggtgatgctagctaagaatctggatgtgtctcaagggctggtgaatggg
gcacgaggagttgttgtaggatttgaaagtgaacagaaggggctgcctaaggtgaggttt
ctctgtggggtcacgcaggtcatcaaaatggagaaatgggtcttcaaaggtccatcagga
gtttatctgagtcgtcaacagttgcctttaaaattggcatgggccatttccattcacaag
agtcagggcatgtctttagactgtgtggaaatctccctgtcccgtgtatttgagagtggg
caggcttatgtagccctctcccgagcccgcagccttgcaggtctccgtgttctggatttt
gatccgaaagtagtgagagctgatccttctgtgttggagttctataggcagctgagacgt
catcaacttctaccacaggattcactacacacccattcaggtgctgatgagaaggagaac
tggaaatgcagctga
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