Phalacrocorax aristotelis (European shag): 142059339
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Entry
142059339 CDS
T11493
Symbol
GTF2B
Name
(RefSeq) transcription initiation factor IIB isoform X1
KO
K03124
transcription initiation factor TFIIB
Organism
parx Phalacrocorax aristotelis (European shag)
Pathway
parx03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
parx00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
142059339 (GTF2B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
parx03021
]
142059339 (GTF2B)
Transcription machinery [BR:
parx03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
142059339 (GTF2B)
Prokaryotic type
Archaeal type
TFB
142059339 (GTF2B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Cyclin_N
Cyclin_C
BRF2-like_C_cyclin_rpt
RB_B
Sigma70_r4
KIF9
Motif
Other DBs
NCBI-GeneID:
142059339
NCBI-ProteinID:
XP_074954176
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All DBs
Position
6:complement(56804881..56827929)
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AA seq
334 aa
AA seq
DB search
MRERSSGGKQSPLTSWGSSFGARLLDVLPRVTCPNHPDSILVEDYRAGDMICSECGLVVG
DRVIDVGSEWRTFSNDKATKDPSRVGDTQNPLLSDGDLSTMIGKGTGAASFDEFGNSKYQ
NRRTMSSSDRAMMNAFKEITNMADRINLPRNIVDRTNNLFKQVYEQKSLKGRSNDAIASA
CLYIACRQEGVPRTFKEICAVSRISKKEIGRCFKLILKALETSVDLITTGDFMSRFCSNL
GLPKQVQMAATHIARKAVELDLVPGRSPISVAAAAIYMASQASAEKRTQKEIGDIAGVAD
VTIRQSYRLIYPRAPDLFPADFKFDTPVDKLPQL
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atgagagagcgctcgtctggagggaagcaatcgccgctaacttcttggggaagttccttc
ggagctagacttttggatgtacttccgcgagtcacttgcccaaatcatccagattccatt
ttagtagaggattacagagctggtgatatgatttgttctgagtgtggactagtagtaggt
gaccgggtcatagacgtagggtcagagtggagaactttcagcaatgacaaagcaacaaaa
gacccatctcgagttggggatacccagaatcctttgctgagcgatggcgacttgagcaca
atgattggcaagggcacgggtgcggcaagttttgatgaatttgggaattcaaagtaccaa
aatcgcagaactatgagcagctctgatcgtgcaatgatgaatgcttttaaagaaataacg
aacatggcagacagaatcaacctccctcgaaatatagttgatcgaacaaataatttattc
aagcaagtgtatgagcaaaagagcctgaagggaaggagtaatgatgctattgcttctgct
tgtctctacatagcctgtaggcaagagggtgttccaagaacatttaaagaaatttgtgca
gtgtccaggatttcaaagaaggaaataggccggtgttttaaactgattttgaaagctctc
gaaaccagtgtcgatctgattactactggagacttcatgtcaaggttctgctccaatctg
ggtcttcccaaacaagtacaaatggcagcaacgcatattgctcgtaaagctgtggaatta
gatttggttcctgggagaagccctatctctgtagcagctgcagctatttacatggcatca
caagcttctgcagagaaaaggacacaaaaagaaattggtgatattgctggtgtggctgat
gttacgattagacagtcgtacaggctgatctatcctcgcgctccagatctcttcccagca
gacttcaagtttgataccccagtagataaactaccacagctgtga
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