Phalacrocorax aristotelis (European shag): 142059585
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Entry
142059585 CDS
T11493
Symbol
RFC4
Name
(RefSeq) replication factor C subunit 4 isoform X1
KO
K10755
replication factor C subunit 2/4
Organism
parx Phalacrocorax aristotelis (European shag)
Pathway
parx03030
DNA replication
parx03410
Base excision repair
parx03420
Nucleotide excision repair
parx03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
parx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
142059585 (RFC4)
03410 Base excision repair
142059585 (RFC4)
03420 Nucleotide excision repair
142059585 (RFC4)
03430 Mismatch repair
142059585 (RFC4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
parx03032
]
142059585 (RFC4)
03036 Chromosome and associated proteins [BR:
parx03036
]
142059585 (RFC4)
03400 DNA repair and recombination proteins [BR:
parx03400
]
142059585 (RFC4)
DNA replication proteins [BR:
parx03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
142059585 (RFC4)
DNA Replication Termination Factors
ELG1-RFC complex
142059585 (RFC4)
Chromosome and associated proteins [BR:
parx03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
142059585 (RFC4)
DNA repair and recombination proteins [BR:
parx03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
142059585 (RFC4)
Check point factors
HRAD17(Rad24)-RFC complex
142059585 (RFC4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
142059585
NCBI-ProteinID:
XP_074954491
LinkDB
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Position
7:complement(217746..232446)
Genome browser
AA seq
467 aa
AA seq
DB search
MIRSNGKAKKMHFRFTGSFCTNNPRTCTPGGAARTATARADEGLSGDDSTTANRLGQLEQ
NRAGTDSGFRRFQCQRRTDTHRSRQERESAPAPGPQRLPPPDRRGRSSARFRRCFCTERE
GWRGGGASRLAPRRSRPERKRGRGVLSRPKNVDEVAFQDEVVAVLKKSLEGADLPNLLFY
GPPGTGKTSTILAAARELYGPELFRQRVLELNASDERGIQVIREKVKAFAQLTASGSRSD
GKVCPPFKIVILDEADSMTSAAQAALRRTMEKESKTTRFCLICNYISRIIEPLTSRCSKF
RFKPLSDKIQQQRLLDVSEKEHVKISSEAISYLVKVSEGDLRKAITFLQSATRLIGGKEI
TEEIVTEISGVIPKETTDELLSVCRSGSFEKLETLAKNLINEGYAVAQLVNQLHDTVVES
EDYSDKQKSVIVEKLAEVDKCLADGADEYLQLMSLCALVMQQLTENT
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atgattagaagtaatgggaaagcaaaaaagatgcactttcgcttcactggaagcttttgc
acaaacaacccccgcacctgtacgcctgggggagctgctcgcacggcaacagcaagggcc
gacgaaggtctgagcggcgatgacagtacaaccgcaaatcgcctggggcagctggagcag
aacagagctggcacggactccggcttccgtcggtttcaatgccagagacgcaccgacacg
caccgtagccggcaggagagggagagcgcccccgccccagggccgcagcggctcccacct
cctgacaggagaggccgctcctccgctcgctttcggcgctgcttttgtacagagcgggag
gggtggcgaggagggggcgccagccgcctggcaccccgccgcagccgccctgagaggaag
cgcggccgcggcgtcctgagtcgccccaaaaatgtagatgaagtcgccttccaggatgaa
gttgttgctgtgctgaaaaagtccttggaaggtgctgatcttcccaatctgttgttctat
ggcccacctggaactggaaagacttccactattttagcagctgctagagaactctatggg
cctgaattattccggcaaagagtccttgagttaaatgcatctgatgagcgtggaatacaa
gtgattcgggaaaaagtgaaggcttttgctcagctaactgcatctggaagccgttcagat
ggtaaagtttgtcctccttttaaaattgtaattctggatgaagcagactcaatgacttca
gcagcccaggcggccttaagacgcacaatggaaaaagaatctaaaacaacacgtttctgc
cttatatgtaactacatcagcagaataatcgaaccgttaacatctcgatgctccaaattc
cgcttcaagcctttgtcagacaaaatccaacagcagaggctattggacgtttctgagaag
gaacatgtgaaaatcagtagtgaggcaatatcttaccttgttaaagtgtcagaaggagac
ttaagaaaagcaattacttttcttcaaagtgccactcgcctaataggcgggaaagagatc
acagaggaaatagtcactgaaatttctggggtcatccctaaagaaacaactgatgaactg
ctatctgtctgccggagcggctcatttgagaaactggaaacattggcaaagaatctcata
aatgaagggtatgccgttgctcagcttgtaaaccagctgcacgatactgttgttgagagc
gaagattacagtgacaagcagaaatctgtcatagtcgagaaacttgctgaagtagacaaa
tgcttggcagatggtgctgatgaatacttgcagttaatgagcctctgtgcccttgtgatg
cagcagctaacagagaacacttaa
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