Phalacrocorax aristotelis (European shag): 142059801
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Entry
142059801 CDS
T11493
Symbol
NCBP2
Name
(RefSeq) nuclear cap-binding protein subunit 2 isoform X1
KO
K12883
nuclear cap-binding protein subunit 2
Organism
parx Phalacrocorax aristotelis (European shag)
Pathway
parx03013
Nucleocytoplasmic transport
parx03015
mRNA surveillance pathway
parx03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
parx00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
142059801 (NCBP2)
09122 Translation
03013 Nucleocytoplasmic transport
142059801 (NCBP2)
03015 mRNA surveillance pathway
142059801 (NCBP2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
parx03019
]
142059801 (NCBP2)
03041 Spliceosome [BR:
parx03041
]
142059801 (NCBP2)
Messenger RNA biogenesis [BR:
parx03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Cap binding complex
142059801 (NCBP2)
Spliceosome [BR:
parx03041
]
Common components
Common spliceosomal components
Cap binding complex
142059801 (NCBP2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_10
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
142059801
NCBI-ProteinID:
XP_074955009
LinkDB
All DBs
Position
7:complement(14782773..14787189)
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AA seq
157 aa
AA seq
DB search
MCSGGTLSVLCSDSYADLSQYRDQHFRGTRYEQERLLRKSCTLYVGNLSFYTTEEQIHEL
FGKSGDIKKVIMGLDKVKKTACGFCFVEYYARGDAENAMRYINGTRLDDRIIRTDWDAGF
KEGRQYGRGRSGGQVRDEYRQDYDAGRGGYGKTVQCQ
NT seq
474 nt
NT seq
+upstream
nt +downstream
nt
atgtgctccggcgggacgcttagcgtcctgtgcagcgactcttacgccgacctcagccag
taccgggaccagcacttccgggggacgcggtacgagcaggagcggctgctgaggaagagc
tgtacgctgtacgtggggaacctctccttctacaccacggaggagcagatccacgagctc
tttggtaagagcggcgacatcaagaaggtcatcatggggctggacaaagtgaagaaaact
gcctgcggcttctgcttcgtggagtattatgcaagaggagatgctgaaaatgcaatgcga
tacatcaatggaaccagacttgatgataggatcataaggacagactgggatgcaggattt
aaggagggtaggcagtacggtcgtggaagatcagggggccaggtccgagatgaatatcgg
caagactatgacgctggaagaggtggctatggcaaaactgttcaatgccagtga
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