Phalacrocorax aristotelis (European shag): 142059842
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Entry
142059842 CDS
T11493
Symbol
RUBCN
Name
(RefSeq) run domain Beclin-1-interacting and cysteine-rich domain-containing protein isoform X1
KO
K19330
run domain Beclin-1 interacting and cysteine-rich containing protein
Organism
parx Phalacrocorax aristotelis (European shag)
Pathway
parx04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
parx00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
142059842 (RUBCN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
parx04131
]
142059842 (RUBCN)
Membrane trafficking [BR:
parx04131
]
Autophagy
Other autophagy associated proteins
Others
142059842 (RUBCN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RH_dom
RUBC_PIKBD
RUN
Motif
Other DBs
NCBI-GeneID:
142059842
NCBI-ProteinID:
XP_074955109
LinkDB
All DBs
Position
7:complement(18015161..18048026)
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AA seq
1055 aa
AA seq
DB search
MLPVLLKLQCRFGVPFDLHGSSYSPAVATASDPGGSERKEHWKLLGNLKTTVEGLVSTSN
PNVWSKYGGLERLCRDMHSILYHGLIHDKVCCRQKDYWQFVKDIRWLSPGSAHHLEKFIS
LQESNQPDSEGSGDQAIAQLWLQHSLQCHCLSAQLRPLLGNRQYIRKFYADTAFLLSDAH
VTAMLQCLEAVEQNNPRLLAQIDTSMLAGTSLPSLCTSGPLTREMCDHDAEGQESHLPGA
LGCLDHCAESLLTRKSDGLPLVTKSQSLTALPACPYVPAAGCTQQHCFGSFSSLHHPASS
GLSDRRSGSSSISSTSSQPQEHCPSTRSSSFSEGRSLLEQPSSATCFHVPSPKDPFCPAS
EMSSSTTSQSEDTWTGSQDDPQSDANDGPEYLAIGNLGRRGRVCSSTSTNSTKSSSSKLF
SSSSSQKLDSVSSLGEQGASGGGSRGLSLLRRSSFSEGQSSAPQGILKKSHVRSHSDTNV
ASGKLHESHGDPGGGRGPISASTQSSELSTPSSLYVEYDSGQYLSSGEGMFRRPSEGQSL
ISYLSEQDFGSCADLEKENAHFSISESLIAAIELMKCNMMSRQLEEEEEDSDKEIQELKQ
KIRIRRQQIRTRHLFPACQELGSDSLVATDSGSQFSSRGSVRLSDSGSMEDVEEYEIRDG
NDGSNLIQMSKNGLSVSMASLFSDADIKRNPDSSRKSFLSSDSMSHPFLNSNSAEAVAMG
LLKQFEGMQLPAASELEWLVPEHDAPQKLLPIPDSLPISPDDGEHADIYKLRIRVRGNLE
WAPPRPQIIFNVHPTPTRKVAVAKQNYRCAGCGIRTDPDYMKRLRYCEYLGKYFCQCCHE
NAQMVIPSRILRKWDFSKYCVSNFSKDLLSKIWSDPLFNVQDINPALYRKVKSLNQVWLL
RIQLFHMKNMFKTCRLAKDLLDSFDAVPGHLTEDLHLYSLSDLSATKKGDLVPRLTELLK
AGSLHVEKCMLCQAKGFICEFCQNEGDIIFPFELNKCRTCEECKACYHKSCFKSTRCPRC
ERLQARRELLAKQSMESYVSDYEDELEEPEAVAAT
NT seq
3168 nt
NT seq
+upstream
nt +downstream
nt
atgctaccagtgcttttaaagctgcagtgcaggtttggggtgccttttgatttgcatggt
tcgagctattctcccgctgtagctactgcttcagacccaggaggttcagaaaggaaggag
cattggaagctgctaggcaacctgaagaccacagtggaaggcttggtgtccaccagtaac
ccaaatgtctggtccaagtatggcggcttggaacggctctgcagagacatgcacagcatc
ctctaccatgggctcatccacgacaaggtgtgctgcagacagaaggattactggcagttt
gtgaaggacattcgctggttgagtcctggctctgctcatcacctggagaagttcatcagc
ctgcaggagagcaaccagcctgactcagagggctcaggggaccaggccatcgcacagctg
tggctgcagcacagcctgcagtgtcactgcctgtcggcgcagctgagaccactcctgggg
aaccggcagtacatcaggaaattctatgcagacactgccttcctgctcagtgacgcccac
gtcacggccatgctgcagtgcctggaggctgttgagcagaacaaccccaggctcctggct
cagatcgacacctccatgctggccggcacgtcactgccatccctgtgcacatcaggtcct
ttgacaagagagatgtgtgaccatgacgcagaaggacaggagagccatctgcctggggca
ctgggctgcctggatcattgtgctgagagcctgcttaccaggaagagtgacggtctgccc
ctggtgaccaagagccagagcctgactgcactccccgcatgcccgtacgtccctgctgca
ggctgcacacagcagcactgctttgggtccttctccagcctccaccacccagcctcctct
ggcctctcagacaggagatcagggagctcctccatcagctctacctctagccagccccag
gagcactgcccatccacccggtcctcctccttcagcgagggcaggtccctgctggagcag
cccagctctgccacctgcttccacgtcccctcacccaaagaccccttctgtccggccagt
gagatgagctccagcaccaccagccagagcgaggacacttggacggggagtcaggatgat
ccgcagagtgatgctaatgatggaccggagtacctggccattgggaacttggggcgccgg
ggccgggtgtgcagcagcaccagcaccaacagcaccaagagcagtagctccaaactcttc
tcctccagcagctcccagaagctggactctgtctcatcactgggagagcagggggcaagt
ggaggtggaagcaggggcctgagcctgttgcgccggtccagcttctcagagggacagtcg
tcagcgccgcagggaatcctcaagaagagccacgtgcgctcgcactccgacaccaacgtg
gcttcggggaagttgcacgagtcccatggcgatccaggtggagggagagggccaatctct
gcttccacccagagcagtgaactgagcacacccagctccctctacgtggagtatgactct
gggcagtacctgagctcaggagaagggatgttcagaagaccctcagaagggcagtctctc
atcagctacctctctgagcaggactttggcagctgtgcagacctggagaaggagaatgcc
cacttcagcatctcagagtccctgatcgctgccattgagctgatgaaatgcaacatgatg
agccggcagctggaggaggaggaagaagacagtgacaaggagattcaggagcttaaacaa
aagattcgcattcggcgccagcagatccgcaccaggcacctgttccctgcctgccaggag
ttgggctcagacagtcttgtggctacagacagcgggtcccagttcagctctcgtggctcc
gtgcggctctctgactctggctccatggaggatgtggaagagtacgagatccgagatggt
aacgatggatctaacctgattcaaatgtccaagaacggcctctcagtgtcaatggcttcc
ttgttctcagatgcagacatcaagaggaacccagactccagcaggaagtcctttctctcc
tcggactccatgtcccaccccttcctcaattccaactcggccgaggccgtggccatgggc
ttgttgaagcagtttgagggcatgcagcttccagctgcctctgaattggagtggctggtc
cctgagcacgacgccccgcagaagctcctgcccatccccgactctctgcccatctctcct
gacgatggagaacatgctgacatctacaagctgaggattcgggtgcgcggaaacttggag
tgggccccaccacgaccacagatcatcttcaatgttcacccaaccccaacgaggaaggtg
gccgtggccaagcagaattaccgttgtgcaggctgtggcatccggactgatcctgattac
atgaagcggctgcggtactgtgagtacctggggaagtatttctgccagtgctgccatgag
aatgcccagatggtcatccccagccgcatcctgcgcaagtgggacttcagcaagtactgt
gtgagcaacttctccaaagacctgctgagcaagatctggagtgacccgctcttcaatgtg
caggatatcaatcccgccctgtaccggaaagtgaagtctctcaaccaagtgtggctgctg
cgaatccagcttttccacatgaagaacatgtttaagacgtgccggctagctaaagacctc
ctagactccttcgatgcagtgcctggccacttgacggaggatttgcacctctactcgctg
agcgacctcagcgccacgaagaaaggggacctggtgcctcgactgacagagctcctgaaa
gcaggcagccttcatgttgagaagtgcatgctgtgccaagccaaaggcttcatctgtgag
ttctgccagaatgagggtgacatcattttcccctttgagctcaacaagtgcaggacatgt
gaagagtgcaaagcctgctaccacaaatcctgcttcaaatccacccgctgtccccgctgt
gagcggcttcaagcccggagagagctgctggccaagcagagcatggagtcctacgtctca
gactacgaagacgagctggaggagccagaggcagtggcagccacctga
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