Phalacrocorax aristotelis (European shag): 142060199
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Entry
142060199 CDS
T11493
Symbol
CHRNA5
Name
(RefSeq) neuronal acetylcholine receptor subunit alpha-5 isoform X1
KO
K04807
nicotinic acetylcholine receptor alpha-5
Organism
parx Phalacrocorax aristotelis (European shag)
Pathway
parx04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
parx00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
142060199 (CHRNA5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
parx04040
]
142060199 (CHRNA5)
Ion channels [BR:
parx04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
142060199 (CHRNA5)
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GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
142060199
NCBI-ProteinID:
XP_074956082
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Position
7:complement(35145787..35164873)
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AA seq
472 aa
AA seq
DB search
MAERGVWLRCHHPLLLLTWLFAPFLGQCGAGPAARAPYVGISEPSFIAKSEDRLFKHLFE
DYQRWVRPVERLNDTIKIKFGLAISQLVDVDEKNQLMTTNVWLKQEWIDVKLRWNPEDYA
GITSIRVPSDSIWVPDIVLYDNADGRFEGTSTKTVVKYDGTVAWTPPANYKSSCTIDVTF
FPFDLQNCSMKFGSWTYDGSQVDIILEDYYVDKRDFFDNGEWEIVTATGSRGNRTDGCCW
YPFVTYSFIIRRLPLFYTLFLIIPCIGLSFLTVLVFYLPSNEGEKISLCTSVLVSLTVFL
LVIEEIIPSSSKVIPLIGEYLVFTMIFVTLSIVITVFAINIHHRSSSTHNAMAPWVRKIF
LHKLPKLLCMRSHVDRYFTQKEETGNMNGSESSRNTLEAALDSIRYITRHVMKENEVREV
VEDWKFIAQVLDRMFLWTFLLVSIIGSLVLFIPVIRKWASIIVPTHIGSTNA
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atggccgagcgcggagtctggctgcgctgccaccaccccttgctcctcctcacctggctc
ttcgcgccctttctcggccagtgcggagccggccccgctgcccgcgccccgtacgtgggt
atatctgaaccttcttttattgctaaaagtgaagatcgtttgtttaaacatttatttgaa
gactatcaaagatgggttcgtccagtggaacgcttgaatgacacaataaaaataaagttt
ggccttgcaatctctcagctggtagatgtggacgagaaaaatcaattgatgaccacaaat
gtctggttgaaacaggaatggatagatgtaaaattaaggtggaatcctgaagactatgct
ggaataacatctattcgtgtgccatcagattctatttgggttccagatattgtactgtat
gacaatgcagatggacgttttgagggaacatctacaaaaacagtggtaaaatatgatggc
accgttgcttggactccaccagcaaactacaaaagttcttgtactattgatgtaaccttc
ttcccctttgacctccaaaattgctctatgaaatttggttcctggacttacgatggctca
caggttgatataattcttgaagattattatgttgacaaaagagacttttttgataatgga
gaatgggaaatagtgactgcaacagggagcagaggaaataggactgatggatgctgctgg
tatcctttcgttacatattcatttataattagacgtttgccacttttttacacattgttt
ctcattattccttgtatcgggctttcgtttctaactgtccttgtcttctatcttccttca
aatgaaggtgagaaaatttcactttgcacttcagtactggtatctttaactgtttttctt
cttgttattgaagagattattccatcatcttctaaagttatcccacttataggagagtac
ttggtgtttactatgatatttgtgacattgtccattgtgataactgtctttgctatcaat
attcatcatcgctcttcgtctacacataatgctatggcaccttgggttcgcaagatattt
cttcacaaacttcccaagctgctttgcatgagaagtcatgtagatagatacttcactcag
aaggaggaaacaggaaatatgaatggatcagaatcatctaggaacaccttggaagcagct
ctagattctatccgatatattacaagacatgttatgaaggagaatgaagttcgtgaggtt
gttgaagactggaaatttattgctcaagtgctcgatcgaatgttcttatggacttttctt
ctggtttcaataattggatcacttgtgttatttattcctgttattcgtaaatgggcaagt
ataatagtacctacgcatataggcagtacaaatgcataa
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