Phalacrocorax aristotelis (European shag): 142060298
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Entry
142060298 CDS
T11493
Symbol
MYO5C
Name
(RefSeq) unconventional myosin-Vc isoform X1
KO
K10357
myosin V
Organism
parx Phalacrocorax aristotelis (European shag)
Pathway
parx04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
parx00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
142060298 (MYO5C)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
parx03019
]
142060298 (MYO5C)
04131 Membrane trafficking [BR:
parx04131
]
142060298 (MYO5C)
03029 Mitochondrial biogenesis [BR:
parx03029
]
142060298 (MYO5C)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
parx04812
]
142060298 (MYO5C)
Messenger RNA biogenesis [BR:
parx03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
142060298 (MYO5C)
mRNA cycle factors
P-body specific factors
142060298 (MYO5C)
Membrane trafficking [BR:
parx04131
]
Others
Actin-binding proteins
Myosins
142060298 (MYO5C)
Mitochondrial biogenesis [BR:
parx03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
142060298 (MYO5C)
Cytoskeleton proteins [BR:
parx04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
142060298 (MYO5C)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
Myosin_N
AAA_22
Par-4_C
AAA_16
DUF2375
NPHP3_N
Motif
Other DBs
NCBI-GeneID:
142060298
NCBI-ProteinID:
XP_074956443
LinkDB
All DBs
Position
7:41618126..41654788
Genome browser
AA seq
1736 aa
AA seq
DB search
MALAELYTQYNRVWIPDNEEVWQSAEITKNYKAGDHFLHVQLEDGTELNYPVDPAALPPL
RNPDILVGENDLTALSYLHEPAVLHNLKVRFVESKLIYTYSGIILVAINPYKQLPIYGDA
IIHAYSGQNMGDMDPHIFAVAEEAYKQMARNNKNQSIVVSGESGAGKTVSARYTMRYFAT
VSKSSSNAHVEDKVLASNPITEAVGNAKTTRNDNSSRFGKYTEISFDQSYQIIGANMRTY
LLEKSRVVFQSENERNYHIFYQLCASAMQPEFKHLKLGSAEEFNYTRMGGSTVIEGVDDR
ANMVETKKTFALLGLKGNFQMDVFKILAAILHLGNVEITAVGDERSSISLEDKHLNIFCE
LLDLNCEKMAQWLCHRKIITTSDTVIKPMTRAQAVNARDALAKKIYSHVFDFIVESINCA
LQFHGKQHTFIGVLDIYGFETFDVNSFEQFCINYANEKLQQQFNLHVFKLEQEEYMKEDI
PWTLIDFYDNQPVIDLIEAKMGILELLDEECMLPHGTDENWLQKLYNNFVNKNALFEKPR
MSNTSFIIQHFADKVEYKCEGFLEKNRDTVHEVLTEILKESKFRLCANFFQDNPVSISPF
SSTINIKSARPVLKSPNKQLRMTVGSKFRNSLSLLMVTLSATTPHYVRCIKPNDEKLPFE
FDSKRVAQQLRACGVLETIRISAQSYPSRWTYIEFFSRYSILMSQQELSINDKKQICKIV
LQRLIQDRNQYQFGRTKIFFRAGQVAYLEKLRSDKLRHACIMIQKSVRGWLQRKKFLHIK
QAAIIIQQYFRGQRTVRQAITARTLKQTWAAIIIQKYCRGYLVRRVCQLIHVAAVTIQAY
TRGFLARKKYQKVLKEHKAVILQKYARAWLARRRFQNIRRFVLNIQLSYRVQRLQKKIEE
QSRENHGLLERLTNLASTHMNDMDTIQKLELDLGKLTAQKRTYEEKGKKFKEDSEQKILK
LENQNKELQEQKETLEIKLQEKTDEMKEKMDDLMKQLFSEVQKEENQRMILEKNFQNQKQ
DYEKEIELLKGEIKILKEEKTQLQHQIQQEIVIQDGLKMEVGQLTKQARKIPELQKEIEL
LQTQKLDVEKQAQSQKRELREKMSEVTKQLLESYDFEHIRSRLSMEDLEHLNEDGELWFA
YEGLKKATRVLESHFQSQKEIYEKEIEGLSFKVEYLSQDINHLQKLFREENDINDGIRLE
VSRLTSENLVIPDLKQQVSELENQKSDLENRLHEQTVKLKEMSNRLHYELEGDRTQRRTN
EEQNEIDTKERERLKVTTQEIEGLRNGLLQDEIQDEVKSKIKQETTRLTVENMDLEEKLD
MKDRIIKKLEDQIKTLTKTIEKTEAHVPTLSKEYIGMMEYKKEDEERIIQNLILDLKPHG
VVVNTIPGLPAHILFMCVRYADYLNDADMLKSFMNVTIDGIKKVVKEHSEDFEMLSFWLS
NTYYFLNCLKQYSGEEEFMKCNTPRQNKNCLKHFDLSEYRQILSDLAIRVYHQFIIVMEN
NIQPMIVPGMLEYESLQGISGLKPTGFRKRSSSIDDTDTYTMTSILQQLSYFYSTMRQNG
LESELLKQAVKQLFFLIGAITLNSLFLRKDMCSCRKGMQIRCNISYLEEWLKDKNLQSSN
AKETLEPLSQAAWLLQVKKITDDDAKEICEHCTSLSTVQIVKILNSYTPIDDFEKRVTPS
FVRKVQAMLNNREDLPQLMLDTKYLFQVTFPFTPSPHALEMIQVPSSFKLGFLTRV
NT seq
5211 nt
NT seq
+upstream
nt +downstream
nt
atggcgctggccgagctctacacccagtacaatagggtttggatccctgataatgaagaa
gtttggcagtctgcagaaatcacaaaaaactacaaagctggagaccattttctccatgtg
caattagaagatggaactgaactgaattaccctgttgatccagctgctttgccaccccta
cgaaatcctgacatacttgttggtgaaaatgatctcactgcacttagttatctccatgaa
ccagcagttctacacaatcttaaagttcgttttgtggagtctaagcttatatacacctat
agtggaataattttggttgcaataaacccctataaacagttgccaatatatggagatgct
attatccatgcgtatagtgggcaaaacatgggggacatggatccacatatatttgctgtc
gcagaagaagcatacaagcaaatggcaagaaataacaaaaatcagtctattgtagtcagt
ggagaatcgggagctggaaagactgtatctgcaagatacactatgagatactttgccact
gtgagtaagtcaagcagcaatgcgcatgtggaggataaagtattggcatccaatccaata
actgaggctgttggcaatgcaaaaaccacgcggaatgataatagcagtcgatttggaaaa
tacactgaaattagttttgatcagagttaccaaatcattggagctaacatgagaacatac
ctgcttgagaaatccagagttgtctttcagtcagagaatgagagaaactaccatatattt
tatcagttgtgtgcatctgctatgcaacctgaatttaagcatcttaaattgggaagcgca
gaagaatttaactacacaagaatgggtggcagcacagtaatagaaggagttgatgacaga
gcaaatatggtggagactaagaagacatttgccttactgggtctgaaggggaattttcag
atggatgtttttaaaatactggcagcaatcctacacttaggcaacgtggaaataacagct
gttggagatgaaagatcatccatcagtctggaagataaacatctcaatatattctgtgaa
cttctggatttaaactgtgagaaaatggcacaatggttgtgccaccgaaagattatcact
acctcagacactgtaataaagccaatgacaagagctcaggctgttaatgcaagggatgct
ctggcaaagaagatctattctcatgtatttgactttattgtggaaagtattaactgcgct
ttgcagttccatggcaaacaacatacttttataggtgttttggacatttatggctttgaa
acatttgatgtgaacagttttgaacaattttgcatcaattatgctaatgaaaaactgcag
cagcaatttaacctgcatgtctttaaacttgaacaagaagaatacatgaaagaagatatc
ccatggactttaatagacttctatgacaaccagcctgtcattgaccttattgaagctaaa
atgggaattttagaacttctggatgaagagtgcatgttacctcatggaacagatgaaaac
tggcttcaaaagttatataataattttgtcaataaaaatgcactctttgaaaagccgagg
atgtcaaacacatctttcatcattcaacactttgctgataaggtagaatacaaatgtgaa
ggatttctggaaaaaaacagagatacagtacatgaagtattgactgaaatcttgaaagag
agcaagtttcgtctctgtgcaaatttctttcaagacaatccagtgtccatttcacctttc
agttcaactataaacatcaaatctgcaagacctgttctcaagtcccctaacaaacagctc
cgtatgactgttggcagtaagttccggaattctttgtctttacttatggtgacactcagt
gcaaccacccctcattatgtacgatgtataaagccaaatgatgagaagttgccttttgag
tttgattcaaaaagagtggctcagcaactgcgagcatgtggtgttttggaaacaattcgg
attagtgcacagagctacccatccaggtggacttacattgagtttttcagccgttacagc
attcttatgtcacagcaggaactctccataaatgataaaaagcagatttgcaagattgtt
ttgcagcggctaatccaggatcgtaaccaatatcagtttgggagaacaaaaattttcttc
agagcaggacaggttgcttacttagaaaaactgcgatcagataaactgagacacgcatgc
atcatgatccaaaagagtgttcgaggctggttgcagcggaagaaattccttcacataaaa
caagcagctattataatacagcagtatttccgggggcagcggactgtacggcaagctata
actgcaagaactctgaagcaaacatgggcagctataattattcagaaatactgtcggggt
tacctggtccgtagagtttgccagctcatccatgtggctgctgtaactattcaagcttat
acaagaggatttctagcacgaaaaaaatatcagaaggtgctcaaagaacataaggcagtg
atccttcagaaatatgcccgtgcatggcttgccaggcgcagatttcagaatattcggcgg
tttgtattgaatatccagctttcatacagagttcagcgactgcagaaaaagatagaagaa
cagagtagagaaaatcatggtttgctggaacgattgaccaatctggcttcaactcatatg
aatgacatggatacaattcagaaactcgaattagatcttggaaagttaactgctcaaaag
agaacatatgaagagaaagggaaaaaatttaaagaggacagtgaacagaaaatcttaaaa
cttgagaatcagaataaagaattacaagaacagaaagagaccttagaaataaagctccaa
gaaaaaactgatgaaatgaaagagaaaatggatgacctcatgaagcaactcttcagtgaa
gtgcaaaaagaagaaaatcagagaatgatacttgagaaaaatttccaaaatcagaagcag
gactatgaaaaggagattgaattgctcaagggagaaattaagattctgaaagaagaaaaa
actcagctacaacatcaaattcagcaagaaattgtcattcaagatggcttgaaaatggaa
gtaggacaacttacaaaacaagcgcggaaaatacctgaattgcaaaaggaaattgaactg
ctgcagacacaaaaattggatgttgaaaagcaggcccagtcacagaagcgagaattgagg
gaaaagatgtcagaagttacaaaacagcttcttgaaagttatgattttgaacatataaga
agcagactctctatggaggacttggaacatttaaatgaggatggagaactgtggtttgct
tacgagggcttgaaaaaagctacaagagtattggaaagtcatttccagtctcagaaagaa
atatatgaaaaggagattgaaggtttgagctttaaagttgaatatcttagtcaagatatt
aatcatctacaaaaactatttcgagaggaaaatgacataaatgatggtattcgacttgaa
gttagcaggctaacttcagaaaatctggtgatcccagatcttaaacagcaagtttctgaa
cttgaaaatcaaaaatcagatcttgaaaaccgtcttcatgaacaaactgtaaagctgaaa
gagatgtctaatcggctgcattacgagctagaaggggatagaacacaaagacgaacaaat
gaggaacagaatgagatagacacaaaagaaagagagagactgaaagtcacaacccaagaa
attgaggggctgagaaatggtttgttgcaagatgaaatccaggatgaagtaaaaagcaag
ataaagcaagaaacaactcgacttactgtggaaaatatggatcttgaagaaaaactagac
atgaaagacagaataataaaaaaattggaggatcagatcaaaactcttaccaagactatc
gaaaaaactgaagctcatgtgccaacattgtccaaagagtacattggaatgatggagtac
aaaaaagaggatgaagaaaggatcattcaaaatctgatcctcgatttaaagccccatgga
gttgtagttaatacgatacctgggcttccagctcacatcctattcatgtgtgtgaggtat
gcagattatctgaatgatgctgacatgctgaaatctttcatgaatgtaaccattgatggt
atcaaaaaagttgttaaggaacattcagaagactttgagatgttgtccttttggctttcc
aatacgtattattttcttaactgtttgaagcagtacagcggggaagaggaatttatgaag
tgtaacactccacgtcagaataagaactgtctgaagcattttgatctctcagaatacaga
caaattcttagtgatttggccattcgtgtctatcaccaattcataattgtaatggagaac
aacattcagcccatgatcgtaccaggcatgctggaatatgaaagtcttcagggaatttct
ggcttgaaaccgacagggttccgtaaacgttcttctagtatagatgacacggatacctac
acaatgacctctatcctgcaacagctcagctatttttatagtactatgcgccagaatggc
ttggagtctgagcttctaaagcaggcagtgaagcagcttttctttctgattggcgccatc
accctcaatagtctcttcctccgcaaggacatgtgctcttgtagaaaaggaatgcagata
agatgtaatatcagctacttggaagaatggcttaaggacaagaatcttcaaagcagcaat
gccaaagaaactttggagcctctatctcaagcagcctggctccttcaggtcaaaaagatc
acagatgatgatgccaaggaaatatgtgaacactgcacatctctttctactgtgcagata
gttaagatcctcaactcatacacaccgatagatgattttgagaaaagagtgactccatca
tttgttcgtaaagtccaggctatgctaaacaatcgtgaggatcttccacagttgatgctc
gataccaaatatctctttcaagtgacgtttcctttcaccccctctccacatgccttggaa
atgatacaagtccccagcagcttcaaacttggctttctcacaagggtttaa
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integrated database retrieval system
