Phalacrocorax aristotelis (European shag): 142061023
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Entry
142061023 CDS
T11493
Symbol
VPS35
Name
(RefSeq) vacuolar protein sorting-associated protein 35
KO
K18468
vacuolar protein sorting-associated protein 35
Organism
parx Phalacrocorax aristotelis (European shag)
Pathway
parx04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
parx00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
142061023 (VPS35)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
parx04131
]
142061023 (VPS35)
Membrane trafficking [BR:
parx04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Retromer subcomplex
142061023 (VPS35)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps35
FerA
Motif
Other DBs
NCBI-GeneID:
142061023
NCBI-ProteinID:
XP_074957598
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Position
8:complement(15068661..15094806)
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AA seq
796 aa
AA seq
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MPTTQQSPQDEQEKLLDEAIQAVKVQSFQMKRCLDKNKLMDALKHASNMLGELRTSMLSP
KSYYELYMAISDELHYLEVYLTDEFAKGRKVADLYELVQYAGNIIPRLYLLITVGVVYVK
SFPQSRKDILKDLVEMCRGVQHPLRGLFLRNYLLQCTRNILPDEGEQADEETTGDISDSM
DFVLLNFAEMNKLWVRMQHQGHSRDREKRERERQELRILVGTNLVRLSQLEGVNVERYKQ
IVLPGILEQVVNCRDALAQEYLMECIIQVFPDEFHLQTLNPFLRACAELHQNVNVKNIII
ALIDRLALFAHREDGPGIPADIKLFDIFSQQVATVIQSRQDMPSEDVVSLQVSLINLAMK
CYPDRVDYVDKVLETTVEIFNKLNLEHIATSSAVSKELTRLLKIPVDTYNNILTVLKLKH
FHPLFEYFDYESRKSMSCYVLSNVLDYNTEIVSQEQVDAIMNLVSTLIQDQPDQPAEDPD
PEDFADEQSLVGRFIHLLHSDDPDQQYLILNTARKHFGAGGNQRIRFTLPPLVFAAYQLA
FRYKENSKVDDKWEKKCQKIFSFAHQTISALIKAELAELPLRLFLQGALAAGEIGFENHE
TVAYEFMSQAFSLYEDEISDSKAQLAAITLIIGTFERMKCFSEENHEPLRTQCALAASKL
LKKPDQCRAVSTCAHLFWSGRNTDKNGEELHGGKRVMECLKKALKIANQCMDPSLQVQLF
IEILNRYIYFYEKENEAVTTQVLNQLIQKIREDLPNLESTEETEQINKHFHNTLEHLRLR
RESPESEGPIYEGLVL
NT seq
2391 nt
NT seq
+upstream
nt +downstream
nt
atgccaacaacacagcaatctcctcaggatgaacaggaaaaactcctggatgaagccatt
caggctgtgaaggtgcagtcttttcagatgaagagatgcttggacaaaaacaagctcatg
gatgccttgaaacatgcttccaacatgcttggtgagctgcggacttctatgttatctcca
aagagctattatgagctctacatggcaatttctgatgagctacactacttggaagtctac
ctgacagacgaatttgccaaaggaaggaaagtggcagacctttatgagctagtacaatat
gctggaaatattattccaagactgtatctcctgataacagtaggtgttgtctatgtcaag
tcatttccacagtccaggaaagatattttgaaagacctggtggagatgtgccgtggagta
cagcatcctcttagaggactctttcttagaaactatctcctgcagtgtaccaggaatatc
ttaccagatgaaggcgagcaagcagatgaagaaaccactggagacatcagtgattcaatg
gattttgtgctgctgaactttgctgagatgaacaaactttgggtgcgaatgcaacaccag
ggccatagtcgggacagagagaaaagggagcgagaacggcaggaactgagaatccttgta
ggaacaaacctggttcgcctcagtcagttggaaggtgttaatgtggagcgatataagcag
attgttttgcctggaatattggagcaagttgtaaactgtagagatgctttagctcaggag
tacctcatggagtgcatcatacaggttttcccagatgaatttcacctccaaaccctgaac
ccatttctcagagcctgtgctgagctgcaccaaaatgtgaatgtgaaaaatataattatt
gctttaattgacaggttagctttatttgcacatcgtgaagatggacctggtatcccagca
gatattaaactgtttgacatcttttcacagcaggttgctactgttatacagtctcgccag
gacatgccctcagaagatgtggtatctttgcaagtttctctcattaacttggctatgaag
tgctacccggaccgtgttgactatgttgataaggtgttggagacaaccgtggaaatattc
aataaacttaatctggaacatattgcaacaagcagtgctgtttcaaaggagctgactaga
cttttgaaaatccctgttgatacttacaacaatatcctgacagttctgaaactaaaacat
tttcatcccctctttgaatacttcgattatgagtccaggaagagcatgagttgttacgta
cttagcaacgtgttggattataacacagaaattgtgtcccaagaacaggtcgatgcgatc
atgaatttggtatccacgctgattcaggatcaaccagatcagcctgctgaagatcctgac
cctgaggacttcgctgatgagcagagtcttgtgggaagatttattcatcttttgcattca
gatgaccctgaccaacagtatctgatcctaaacactgcccggaaacactttggtgcaggt
gggaaccaacgtattcgttttacactgccaccattggtgttcgctgcataccagcttgct
tttcgctacaaagagaactccaaagtggatgacaaatgggaaaagaagtgccagaagatc
ttctcatttgctcatcagaccatcagtgctctgatcaaagcagaactggcagagctgcct
ctccgtctcttcctacaaggagcactggctgcaggagagattggctttgagaatcatgaa
actgtggcctatgaattcatgtcccaggccttctctctatatgaagatgaaatcagtgat
tcaaaagcacagctggctgcaatcaccttgataattgggacatttgagaggatgaagtgc
ttcagtgaagagaaccatgagcctctgaggactcagtgtgcactggcagcctctaagctc
cttaagaagccagaccagtgccgtgctgtgagcacttgtgcccatttgttttggtctggc
cgaaatactgacaagaatggagaggagcttcatggaggaaaaagagtgatggaatgccta
aagaaggctctgaagatagcaaatcagtgcatggacccttccctgcaagtccaacttttc
atagaaattctgaatagatatatctatttttatgaaaaggaaaatgaggcggtgacaact
caggttttgaatcagcttatccagaagataagagaagatcttccaaaccttgagtctact
gaagaaacagaacaaattaacaaacactttcacaacacactggagcacttgcgtctgagg
agggaatcaccagaatctgaggggccaatttatgaaggtcttgttctttag
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