Phalacrocorax aristotelis (European shag): 142061057
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Entry
142061057 CDS
T11493
Symbol
CYLD
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase CYLD isoform X1
KO
K08601
ubiquitin carboxyl-terminal hydrolase CYLD [EC:
3.4.19.12
]
Organism
parx Phalacrocorax aristotelis (European shag)
Pathway
parx04217
Necroptosis
parx04622
RIG-I-like receptor signaling pathway
parx04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
parx00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
142061057 (CYLD)
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
142061057 (CYLD)
04625 C-type lectin receptor signaling pathway
142061057 (CYLD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
parx01002
]
142061057 (CYLD)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
parx04121
]
142061057 (CYLD)
Enzymes [BR:
parx01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
142061057 (CYLD)
Peptidases and inhibitors [BR:
parx01002
]
Cysteine peptidases
Family C67
142061057 (CYLD)
Ubiquitin system [BR:
parx04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
142061057 (CYLD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CYLD_phos_site
CAP_GLY
UCH
COX_ARM
Motif
Other DBs
NCBI-GeneID:
142061057
NCBI-ProteinID:
XP_074957684
LinkDB
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Position
8:17114765..17143514
Genome browser
AA seq
954 aa
AA seq
DB search
MSSGLWSQEKPSSSYWEERIFYLLLQECSVIDKQTQKLLKVPKGSIGQFFQDRSSVGHSR
NIPCKGKKLQIGLKILEQPHAILFVDEKDVIEINEKLAELLLAITNCEDRYSLFKSKSRL
TKGIQIDIGSPVRVQLRSGDDKFPGVVRFRGPLLQERSLTGIYFGVELLEEGRGQGFTDG
QYQGKQLFRCDEDCGVFVALDKLELVEDDDNELESDYAAPVDAMQVELPPLEINSRVSLK
IGESIEYGTVIFCDVLPGNESLGYVVGVDMDNPIGNWDGRYNGIQLCSFASVESTLLLHI
NDVMPETLSQDRRPPKLAYTSRGGGDKSLFNHSKPKATGSTSEPGNRNRSEVFYTLNGSS
VDSQPQTKTKPPWYIDEVAEDPAKSLTDSSPGFGHSSPPLQPPLTNSVSTENRFHSLPFS
LTKTTSTNGTIGHSPLSLSVQSVIGDVNTIANQESPSTAGPVGNSHGLEAGSLAEVKENP
PFYGVIRWIGQPPGVNEVLAGLELEDECAGCTDGTFKGTRYFTCAPKKALFVKLKSCRPD
SRFASLQPVSNQIERCNSLAFGGYLSEVVEENTPPKMEKEGLETMIGKKKGIQGHYNSCY
LDSTLFCLFSFSSVLDTVLLRPKEKNDVEYYSETQELLRTEIVNPLRIYGYVCATKIMKL
RKILEKVEAASGFTSEEKDPEEFLNILFHHILRVEPLLKIRSAGQKVQDCYFYQIFMDKN
EKVGVPTIQQLLEWSFINSNLKFAEAPSCLIIQMPRFGKDFKMFNKIFPSLELNITDLLE
DTPRQCRICGGLAMYECRECYEDTDISAGKIKQFCKTCNTQVHLHPKRQSHKFNPLSLPK
DLPDWDWRHGCIPYQKMELFAVLCIETSHYVAFVKYGRDDSAWLFFDSMADRDGGQNGFN
IPQVTPCPEVGEYLKMSLEELHSLDSRKIQGCARRLLCDAYMCMYQSPTISLYK
NT seq
2865 nt
NT seq
+upstream
nt +downstream
nt
atgagttcgggcttatggagtcaagaaaaaccaagttcatcctactgggaagagcggatc
ttttacttgctgctccaagaatgcagtgtcatagacaagcagactcaaaagctcttgaaa
gtgcccaaaggtagcattgggcaattttttcaagaccgttcttctgtgggacactccaga
aatattccttgtaaagggaagaaactgcagattggattaaagattctggaacaacctcat
gcaatcctgtttgtggatgagaaggatgttatagaaataaatgaaaaactagctgagttg
cttttggccattactaactgtgaggacagatacagtctgtttaaaagcaaaagcaggtta
actaaaggcatccaaatagatattggctcgcctgttagagtacagctgagatcgggagat
gataaatttcctggagttgttcgcttccgaggacccttattgcaagaaaggtccctcacc
gggatatactttggagtagagttgctggaagaaggtcgtggtcagggctttactgatgga
cagtaccaaggcaagcagcttttcagatgtgatgaggattgtggggtttttgttgctttg
gacaaactggagctggtggaagatgacgacaatgaactggaaagtgactatgcagctcca
gttgatgcaatgcaggtagaacttcctcctctggagatcaactccagggtttctctgaag
ataggagagagtatagagtatgggacagttatattctgtgatgtcttaccaggaaacgaa
agtttaggatacgttgttggagtggacatggataatcctattggaaactgggatggaaga
tataatggaatacagctgtgtagttttgcaagtgttgaaagtacacttcttttgcatatc
aatgatgttatgccagagactctgtcacaggacaggaggcctcccaagcttgcctatacc
tccagaggtggtggtgacaaaagcttattcaatcatagtaagccaaaggctacaggatct
acctctgaacctggaaatagaaacagatctgaagtcttctacacattaaatggctcatca
gttgactctcagcctcaaacaaaaacaaaacccccatggtatattgatgaagttgctgaa
gaccctgcaaaatcacttactgattcatctcctggatttgggcattcttcaccaccactg
caaccacctttaacaaactctgtgtctacagaaaacagatttcactcccttccttttagc
ttgacaaaaacgacgagtactaatggtactattggacatagtcctctctctttatctgtt
cagtcagtcatcggtgatgtaaatacaatagctaaccaggagagcccatcaacagcaggc
ccagtcgggaactcgcatggtcttgaagcaggttccttggctgaagttaaagaaaatcct
cctttctatggagtaatccgctggattggccagccccctggcgtaaacgaagtattagct
gggctggaactggaagatgaatgtgcaggttgtacagacggaacatttaaaggaactcga
tacttcacttgtgctccgaagaaagctctttttgttaaactcaaaagctgcaggccagat
tcgaggtttgcctcactacagcccgtttccaaccagattgaacgctgcaactctctagcc
tttggaggttacttaagtgaagtggtagaagaaaacactcctccaaaaatggaaaaagaa
ggtttagagacaatgattggaaagaagaaaggtatccagggtcattacaactcctgttac
ttagactccaccttattctgtctgttttcttttagctctgttttagacactgtgttactc
agacctaaagaaaagaatgatgtagaatattatagtgagactcaagagctgttgcggaca
gagattgtgaatcctctgagaatatatggatatgtgtgtgctacaaaaataatgaaactg
aggaaaatacttgaaaaagttgaggctgcatcaggattcacttcagaagaaaaagatcca
gaagaatttttgaatattttatttcatcatattctaagagttgagccactgttgaaaata
agatcagcaggtcagaaagtacaagactgttacttctatcaaatttttatggacaaaaat
gagaaagttggagtcccaacaattcagcagttactagagtggtcattcatcaatagcaac
ctgaagtttgcagaggcaccctcttgcctgattatccaaatgcctcggtttggaaaggat
ttcaaaatgttcaacaaaatctttccatccttggaattaaatataacagacttacttgaa
gatactccgaggcagtgccgcatatgcggagggcttgctatgtatgagtgcagagaatgt
tatgaagatactgatatttctgctgggaaaatcaaacagttctgcaaaacctgcaataca
caagttcatcttcatcccaagagacagagtcataaattcaatccgttgtcgctacctaaa
gatctgccagactgggattggcgacatggctgcatcccctaccagaagatggagttgttt
gctgttctctgcatagaaacaagccactatgtagcttttgttaaatacgggagggatgac
tctgcctggcttttctttgacagtatggctgatcgggatggaggtcagaatggctttaac
attccacaagttaccccatgtccagaagttggtgaatacctgaagatgtctctagaagaa
ttacactcactggattccagaaaaattcaaggctgtgcacggagactactttgtgatgct
tacatgtgcatgtatcaaagtccaacgataagtttgtacaaatga
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