Phalacrocorax aristotelis (European shag): 142061120
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Entry
142061120 CDS
T11493
Symbol
AMFR
Name
(RefSeq) E3 ubiquitin-protein ligase AMFR
KO
K10636
E3 ubiquitin-protein ligase AMFR [EC:
2.3.2.36
]
Organism
parx Phalacrocorax aristotelis (European shag)
Pathway
parx04137
Mitophagy - animal
parx04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
parx00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
142061120 (AMFR)
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
142061120 (AMFR)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
parx04121
]
142061120 (AMFR)
Enzymes [BR:
parx01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.36 RING-type E3 ubiquitin transferase (cysteine targeting)
142061120 (AMFR)
Ubiquitin system [BR:
parx04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
142061120 (AMFR)
Multi subunit type E3
ERAD complex
142061120 (AMFR)
LMBR1L-GP78-UBAC2 complex
142061120 (AMFR)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_SYVN1_N
G2BR
zf-RING_2
zf-C3HC4_2
CUE
zf-C3HC4
zf-C3HC4_3
zf-RING_11
zf-RING_UBOX
zf-rbx1
zf-ANAPC11
zf-RING_5
zf-RING_16
Prok-RING_4
zf-C3HC4_4
Cas_Csy4
zf-RING_Vps41
zf_RING_Vps8
RING_Ste5
Motif
Other DBs
NCBI-GeneID:
142061120
NCBI-ProteinID:
XP_074957842
LinkDB
All DBs
Position
8:complement(21627101..21664408)
Genome browser
AA seq
633 aa
AA seq
DB search
MPLLFLERFPWPSLRTYTALSALALLGTGLSAYRALSQAPGGAAGNEPAELPHRGGPRAL
DLAYYLLSDSLCVWVLVNTACCFLMLVAKLIQCMVFGPLRVSERQHLKDKFWNFIFYKFI
FIFGVLNVQTVEEVVMWCLWFSGLVFLHLMVQLCKDRFEYLSFSPTTPMSSHIRVLTLLI
AMLLSCCGLAVVCGIIGYTHGMHTLAFMAAESLLVTVRTAHVILRYVIHLWDLNHEGTWE
GKGTYVYYTDFVMELTLLSLDLMHHIHMLLFGNIWLSMASLVIFMQLRYLFHEVQRRIRR
HKNYLRVVGNMEARFAVATPEELAVNNDDCAICWDSMQSARKLPCGHLFHNSCLRSWLEQ
DTSCPTCRMSLNISDSHHVREDHQRENLDENLVPVAVAEGRPRLNQHNHFFHFDGSRIAS
WLPSFSVEVMHTTNILGITQASNSQLNAMAHQIQEMFPQVPYHLVLQDLQLTRSVEITTD
NILEGRIQVPFPTQRADSIRPALNSSVERHSTDQEDTETVTQTERVPLELNSRLEEMVEF
SEIEAEPSEAEDFEARGSRFSKSADERQRMLVQRKEDLLQQARKRYLNKTSDEELTTEKP
SPLPEGASADPVTLRRRTLAAAAERRLQMQQNS
NT seq
1902 nt
NT seq
+upstream
nt +downstream
nt
atgccgctgctgttcctggagcgcttcccctggcccagcctccgtacctacacggcgctc
agcgccctggccctgctgggcaccggcctcagcgcctaccgcgccctcagccaggccccc
ggcggggcggcaggcaacgagccggccgagctcccgcaccgcggcgggccgcgggccctg
gacctcgcctactacctactgtccgacagcctctgcgtctgggtgctagtgaacactgcc
tgctgttttctgatgttggttgctaagctaatccagtgtatggtgttcggtcctcttcgt
gtcagtgagaggcagcatctcaaagataaattctggaatttcattttctacaagttcatc
ttcatttttggtgtgctgaatgttcagacagtggaagaagtggtgatgtggtgcctctgg
ttctctggacttgtgtttcttcatctcatggttcagctctgcaaggatcgctttgaatat
ctttccttttctcctaccacacccatgagcagccacatcagagtcctgaccctgcttata
gccatgctcctgtcctgctgtggattagcagttgtctgtggtattattggctacacccat
ggcatgcacaccttggctttcatggcagcagagtctctgcttgtgacagtcagaactgca
catgtcattttacgatatgtaattcatctctgggatctcaaccatgaaggaacatgggag
ggcaaaggcacttatgtctactacacagattttgtcatggagctaaccttgctttcactg
gacttgatgcatcatattcatatgctgctgtttggcaatatctggttgtcaatggcgagc
ctggtgatttttatgcagctgcgctacctgtttcatgaggttcaacgaagaattcggcgg
cacaagaactacctgcgtgttgttggaaacatggaagctaggtttgcagttgcaacacca
gaggagctagcagtcaataatgacgactgtgccatttgctgggactccatgcaatccgca
cgtaaactcccttgcggccatctcttccacaactcgtgcctgcggtcctggctggaacaa
gatacatcttgccccacctgcagaatgtctcttaatatcagtgacagccatcatgtgagg
gaggatcaccaaagagaaaatctggatgagaacctggtccctgtggcagtagcagaaggc
agaccacgcttgaaccagcacaatcacttcttccactttgatggttctcgaattgccagc
tggctgcccagtttttcagtagaagtcatgcataccacaaacatcctcggtatcacacaa
gccagcaactcccagcttaatgctatggcccatcagattcaggagatgttccctcaggtt
ccttatcacttagttctacaggatctgcagctaactcgctctgtagagatcaccactgat
aacatcctagaagggcgcatccaggtacctttccccacacagcgtgcagacagcattaga
cctgcattgaacagttctgtggaacgacacagtactgatcaggaggatactgaaactgtc
acccagactgagagagtgccacttgaactcaactcaagactggaagaaatggtggaattc
agcgaaatcgaagccgagcctagtgaagcagaagattttgaggccaggggaagtcgcttt
tcaaagtcagctgatgaaaggcagcgtatgttggttcagcggaaggaggacttgttgcag
caagctcggaagcgatacttaaacaaaacctccgatgaggagttgaccacagagaaaccc
tctcctctgcctgagggagcatctgccgatcctgtcaccctgcgtcgcaggacgctcgct
gccgccgccgaacggagacttcagatgcagcagaactcttag
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