Phalacrocorax aristotelis (European shag): 142061122
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Entry
142061122 CDS
T11493
Symbol
NUDT21
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 5
KO
K14397
cleavage and polyadenylation specificity factor subunit 5
Organism
parx Phalacrocorax aristotelis (European shag)
Pathway
parx03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
parx00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
142061122 (NUDT21)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
parx03019
]
142061122 (NUDT21)
Messenger RNA biogenesis [BR:
parx03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor Im (CFIm)
142061122 (NUDT21)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NUDIX_2
Motif
Other DBs
NCBI-GeneID:
142061122
NCBI-ProteinID:
XP_074957846
LinkDB
All DBs
Position
8:complement(21665927..21674132)
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AA seq
227 aa
AA seq
DB search
MSVVPPNRSQTGWPRGVNQFGNKYIQQTKPLTLERTINLYPLTNYTFGTKEPLYEKDSSV
AARFQRMREEFDKIGMRRTVEGVLIVHEHRLPHVLLLQLGTTFFKLPGGELNPGEDEVEG
LKRLMTEILGRQDGVQQDWVIDDCIGNWWRPNFEPPQYPYIPAHITKPKEHKKLFLVQLQ
EKALFAVPKNYKLVAAPLFELYDNAPGYGPIISSLPQLLSRFNFIYN
NT seq
684 nt
NT seq
+upstream
nt +downstream
nt
atgtccgtcgtgccgcccaaccgttcgcagaccggctggccccgcggggtgaaccagttc
ggcaacaagtacatccaacagacgaagccgctcacgctggagaggaccatcaacttgtac
cctctgacaaattacacatttggtacaaaggagcccctgtatgagaaggacagttccgtg
gcagctcggtttcagcgcatgagggaagaatttgacaagattggcatgaggcggacagtg
gaaggggttctgattgtacacgagcacaggctgccccatgtgctgttactgcagctgggt
acaactttttttaagctacctggtggtgaactcaatccaggagaagatgaggtagaaggg
ctcaaacgcttaatgacagagatactgggtcgtcaggatggtgttcagcaagactgggtg
attgatgactgcattgggaactggtggagacccaactttgaacctccacagtatccctat
atcccagctcatatcacaaaaccaaaagagcacaaaaagcttttcttggtccagcttcaa
gaaaaggctttgtttgcagtccccaaaaattacaagctggtcgctgcaccattgtttgag
ctctatgacaatgcaccggggtacggacccattatttccagccttcctcaacttctgagc
aggttcaactttatttacaactga
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