Phalacrocorax aristotelis (European shag): 142061138
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Entry
142061138 CDS
T11493
Symbol
RFWD3
Name
(RefSeq) E3 ubiquitin-protein ligase RFWD3 isoform X1
KO
K15691
E3 ubiquitin-protein ligase RFWD3 [EC:
2.3.2.27
]
Organism
parx Phalacrocorax aristotelis (European shag)
Brite
KEGG Orthology (KO) [BR:
parx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
parx04121
]
142061138 (RFWD3)
Enzymes [BR:
parx01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
142061138 (RFWD3)
Ubiquitin system [BR:
parx04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
142061138 (RFWD3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_RFWD3
zf-RING_2
zf-C3HC4
zf-C3HC4_2
Beta-prop_WDR5
zf-RING_UBOX
WDR55
Beta-prop_WDR3_1st
zf-rbx1
WD40_CDC20-Fz
zf-RING_5
Beta-prop_THOC3
EIF3I
Beta-prop_EML_2
Myo5a
Beta-prop_WDR3_2nd
Beta-prop_WDR36-Utp21_1st
zf-RING_11
Rtf2
zf-UDP
zf-ANAPC11
Beta-prop_RIG_2nd
CFAP43_N
zf-RING_Vps41
Beta-prop_WDR36-Utp21_2nd
zf-C3HC4_4
WD40_WDHD1_1st
WD40_Prp19
NBCH_WD40
WD40_2
Beta-prop_RSE1_2nd
DUF7837
Beta-prop_WDR75_1st
Motif
Other DBs
NCBI-GeneID:
142061138
NCBI-ProteinID:
XP_074957872
LinkDB
All DBs
Position
8:22034623..22057876
Genome browser
AA seq
787 aa
AA seq
DB search
MESFHLLAPLASAAWAAGCLKEALAFASFRKTPRFNEMAQEEMEVDLQQAAGYSVENLRT
FFTEPSGYAVLSSHASVLSEGDSITVLPADDAVVIPNADTTREAAAEPEPQLSPALALNR
LQRLQGVFDPYRPLPVPQVTQRLRVTRARRQQRIGGSQRTVSARTALDSYFQLSRTQEPA
TGPVPHLDPLHIARPSQEHSSDETIEVSNSDNSTSEEEEAVEAAPLLLPSAQETPPAASS
GVSSQVQAEPPQALSQASAEHSSHGDEEAEVQQKQRTPLKKLEPSVPVAPLDEEEGDTCA
ICFEQWTNAGDHRLSALRCGHLFGYTCIERWLKGQGGKCPQCNKNAKRSDIVILYARTLK
ALDTSEQERMKSSLEKEQILRRQAELESAQSRLQLQVLTDECSKLRKQVQELKAVVAQHN
VSPSQQPGSSRTCLPGSLPSSQSQRKYHLEKVFVVSQTGNCRVMAYCDSLSCLVVSQPSP
QSTFIPGCGVKMMSVANLKSSQYIPIHSKQIRGLAFGNRADGLLLSAALDNTLKLTSLAT
NTVVQTYNAGRPVWSCCWCLDDTNYVYAGLVNGSIMIYDLRDTNSHVQELVPQKSRCPMV
SLSYLPRMASASLPYGGILAGTLEGACFWEQKDGNSYRPHYLPLEPGGCIDIQTEISTRH
CLATYRPSKNNPCVRCVMMELTCSSLTEGSEDVVCSSNPVQTFSAGPTCKLLTKNAIFQS
PEEDGSVFVCAGDEASNSALLWDAGSGSLLQKLQADLPVLDICPLEVNQTHLLATLTEKM
VKIYKWH
NT seq
2364 nt
NT seq
+upstream
nt +downstream
nt
atggagagcttccatctgctggctcctctggcatctgctgcatgggcagctggctgtctc
aaggaagcactggcctttgcctccttcaggaagactccaagatttaatgaaatggctcaa
gaagagatggaagttgatctccagcaggcggctggctactctgtagagaacctcaggacg
tttttcaccgagccctctggttatgctgtgctgtcatcccatgcttcagtgctcagtgaa
ggagacagcattacagttctccctgctgatgacgctgttgtcataccaaatgctgacaca
acaagagaagcggctgctgagcctgagccacagttgagtcctgccctggctctcaacaga
ctgcaaaggctgcaaggggtgtttgatccgtatcggccgttgcctgtgccgcaggtcaca
cagcgtctgcgagtcacgagagctcgcaggcaacagagaattggtggttcccagaggact
gtcagtgccaggacagcattggacagttactttcaactcagcaggacccaagagccagct
acaggaccagttccacatctggatcccttgcatattgcaaggcccagccaggaacacagc
tcagatgaaaccatagaagtgagcaactctgacaacagcacctcggaggaggaggaagca
gtggaggctgcaccactgctgttaccatcagcccaggagacacctccagcagctagctca
ggagtttccagtcaggtccaagcagagccaccccaagctttgtctcaagcttctgcggaa
cacagtagtcatggagatgaagaggctgaagtccagcaaaagcagagaactccactaaag
aaactggagccatcagttcctgttgcaccgctggatgaggaagaaggggatacctgtgcg
atctgctttgagcagtggaccaatgctggggaccaccgtctctcggcattgcggtgtggg
cacctgtttggttatacctgcattgaaagatggctcaaggggcagggagggaagtgcccc
cagtgcaataagaacgcgaaacgttctgacatcgtgatactgtatgctcgtactttgaaa
gcgctggataccagtgaacaggaacgcatgaaaagctctctagaaaaggagcagatattg
cggagacaggcagaactggaatctgcacagagccgtctccagctgcaggttttgacagat
gaatgcagcaaactccgcaagcaagttcaggagctgaaggctgtggtggcccagcacaat
gtgagtccttctcagcaacctggtagctcccgcacctgcctcccaggcagcctcccctcc
agccaaagccagcgcaagtaccacttggaaaaggtttttgtggtgtctcagactgggaac
tgcagagtaatggcatactgtgactcactgagttgtcttgtggtatcacagccttctcca
cagtctacttttattcctggttgtggtgttaagatgatgagcgtggccaacctgaagagc
agtcagtacatccccatccacagtaaacagattcggggactggctttcggcaatcgagca
gatggcttgctgctctctgctgctctggacaacactctcaaacttaccagcttggcaaca
aatactgtggtgcagacatacaacgctggccgtcctgtctggagctgctgctggtgtctt
gatgatacaaactatgtctacgctggactagtcaatggctctatcatgatatatgatttg
agagacacaaactctcatgtccaggaactagtccctcagaagtctaggtgccccatggta
tcactctcctatctgccccggatggcctctgcatcactgccttatggtggaatattagct
gggaccttggaaggagcctgcttttgggaacagaaagatggcaactcctaccggcctcat
tacctgccgctggaacctggaggatgcatcgatattcaaacagagatcagcacacgacac
tgcctcgcaacttacaggcctagtaaaaataacccatgtgtgcgttgtgtgatgatggaa
ctgacctgcagctcactgactgagggctctgaagatgtggtgtgttcttctaacccagtt
cagactttcagtgctgggcccacctgcaagctgctgacgaagaatgccatttttcagagc
ccagaggaggatggcagcgtctttgtgtgtgctggtgatgaggcatctaattctgccctg
ctatgggatgctggaagtggctccttgctgcagaagctgcaggctgacctgcctgtgctg
gatatctgccccttggaagtgaaccaaacccacctcctggccactctcactgagaagatg
gtgaagatctacaagtggcattga
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