Phalacrocorax aristotelis (European shag): 142061168
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Entry
142061168 CDS
T11493
Symbol
EXOSC6
Name
(RefSeq) exosome complex component MTR3
KO
K12587
exosome complex component MTR3
Organism
parx Phalacrocorax aristotelis (European shag)
Pathway
parx03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
parx00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
142061168 (EXOSC6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
parx03019
]
142061168 (EXOSC6)
Messenger RNA biogenesis [BR:
parx03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
142061168 (EXOSC6)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
142061168
NCBI-ProteinID:
XP_074957967
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All DBs
Position
8:complement(22958881..22960421)
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AA seq
276 aa
AA seq
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MPLDHRRVRGPEESQPPEVWAAAGGAGEEEDGEGDAAPRDPCALRPLFARAGLLSQAEGS
AYVELGGGTKVLCAAWGPREAAEPGLPAGGGGWLLCEFRRAPFAGRGARWRPGSVTEREA
EREAAAALREALEPAVRLARYPRARLAVSALLLQDGGSALAAAISAAALALADAGVEMYD
LAVGCALCRSPGPTAPWMLQPGEPEERSAVARLTVALLPALNQVSVVVGGGQGSSPDAWA
QALRLGLDGCHRLYPVLRQSLLRAARRRDAAAATTA
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atgccgctggatcaccggcgtgtgcggggcccggaggagtcgcagccgccggaggtgtgg
gcagcggccgggggagctggggaggaagaggacggggagggggatgcggcaccgcgggac
ccctgcgccttgcgaccgctcttcgcccgggccggactgctgagccaggctgaaggctcg
gcctacgtggagctgggcggcggcactaaggtgctgtgcgccgcctggggcccgcgggaa
gcggctgagcccggcctgccggcgggaggaggaggatggctgctctgcgagttccgccgg
gcccccttcgccggacgcggggctcggtggcgaccaggttcggtgacggagcgggaggcc
gagcgggaagcggcggcggcgttgcgggaagcgctggaaccggcggtgaggttggcccgg
tatccgcgggctcgcttagccgtcagcgccctgctcttgcaggatggtggctcggccttg
gccgctgccatcagcgctgcagccttggccttggccgatgctggggtggagatgtacgac
ctggcggtgggttgtgccctgtgccggtcccccggtcccactgccccttggatgctgcag
cccggagagcctgaagaacgcagcgctgttgctcgactcaccgtggctcttctacccgcc
cttaaccaggtgtcggtggtggtgggtggcgggcagggcagctctcctgatgcctgggcg
caggcgctgcgccttggcctcgacggctgccatcgtctctaccccgtcctgcggcagagc
ctgctgcgggctgcccgacgccgcgatgctgctgccgccaccactgcctga
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