Phalacrocorax aristotelis (European shag): 142061291
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Entry
142061291 CDS
T11493
Symbol
ROBO1
Name
(RefSeq) roundabout homolog 1 isoform X1
KO
K06753
roundabout, axon guidance receptor 1
Organism
parx Phalacrocorax aristotelis (European shag)
Pathway
parx04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
parx00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
142061291 (ROBO1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
parx04515
]
142061291 (ROBO1)
Cell adhesion molecules [BR:
parx04515
]
Immunoglobulin superfamily
ROBO family
142061291 (ROBO1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
I-set
Ig_3
ig
Ig_2
fn3
V-set
C2-set_2
FN3_DSCAM-DSCAML_C
Pur_ac_phosph_N
Unc5_NetrinR_N
Ig_PDGFR_d4
DUF7908
Big_4
Ig_J_second
Motif
Other DBs
NCBI-GeneID:
142061291
NCBI-ProteinID:
XP_074958229
LinkDB
All DBs
Position
1:complement(112420501..113169481)
Genome browser
AA seq
1691 aa
AA seq
DB search
MGSRAAFAPRRGAASCRRPVATAGGGCPGLGAGTRGYAAPVRPWSCGRPVPPAGSAWGPC
GVAVAAAEPRRRGAPRPPAGGGLELPGGEAAGSRLRQEDFPPRIVEHPSDLIVSKGEPAT
LNCKAEGRPTPTIEWYKGGERVETDKDDPRSHRMLLPSGSLFFLRIVHGRKSRPDEGVYV
CVARNYLGEAVSHNASLEVAILRDDFRQNPSDVMVAVGEPAVMECQPPRGHPEPTISWKK
DGTPLDDKDERITIRGGKLMITYTRKNDAGKYVCVGTNMVGERESEVAELTVLERPSFVK
RPSNLAVTVDDSAEFKCEARGDPVPTVRWRKDDGELPKARYEIRDDHTLKIRKVMAGDMG
SYTCVAENMVGKAEASATLTVQGKNVSPQFVVKPRDQVAALGRTVTFQCEATGNPQPAIF
WRREGSQNLLFSYQPPQSSSRFSVSQTGDLTITNVQRSDVGYYICQTLNVAGSIITKAYL
EVTDVIADRPPPVIRQGPVNQTVAVDGTLVLSCVATGTLMPTILWKKDGILISTQDSRIK
QLETGALQIRYAKLGDTGRYTCIASTPSGEATWSAYIEVQEFGVPVQPPRPTDPNLIPSA
PSKPEVTDVSRNTVTLSWQPNLNSGATPTSYIIEAFSHASGSSWQTVAENVKTESFAVKG
LKPNAIYLFLVRAANAYGLSDPSQISDPVKTQDVPPTSQGVDHKQVQRELGDVVLHLHNP
TILSSSSIEVHWTVDQQSQYIQGYKILYRPTPASYGESEWLIFEVRTPTKNSVIIPELKK
GVNYEIKARPFFNEFQGADSEVKFAKTLEEAPSAPPQSVSVTKNDGNGTAIVVTWQPPPE
DNQNGMVQEYKVWCLGNESRYHINKTVDGSTFSVVIPSLVPGIRYSVEVAASTGAGPGVK
SDPQFIQLDSHGNPVSSEDQVSLAQQISDVVKQPAFIAGIGAACWIILMVFSIWLYRHRK
KRNGLTSTYAGIRKVPSFTFTPTVTYQRGGEAVSSGGRPGLLNISEPAAQPWLADTWPNT
GNNHNDCSINCCTSGNGNSDSNLTTYSRPADCIANYNNQLDNKQTNLMLPESTVYGDVDL
SNKINEMKTFNSPNLKDGRFVSQPGQPTPYATTQLIQSNISNNVNNGSGDTNEKHWKPSV
QQKQEVAPIQYNIMEQNKLNKDYRVNDNIAPTIPYNQSYDQNTGGSYNSSDRGSSTSGSQ
GHKKGARTPKAPKQAGMNWADLLPPPPAHPPPHSNSEDYSLSVDESYDQEIPCPVPPARM
YLQQDELEEEEEDERGPTPPVRGAASSPAAVSYSHQSTATLTPSPQEELQPMLQDCQEDL
GHIQHQPDRRRQPVSPPPPPRPISPPHTYGYISGPLVSDMDTDAPEEEEDEADVEVAKMQ
NRRLLLRGLEQTPASSVGDLESSVTGSMINGWGSASEEDNISSGRSSVSSSDGSFFTDAD
FAQAVAAAAEYAGLKVARRQMQDAAGGRRHFHASHCPRPTSPMSTDSNMSAVVIQKVRPA
KKQKHQPGHLRREVYTDDLPPPPVPPPAIKSPTAQSKSQLEVRPVMLPKLASIEARTDRS
AERKGASYKGRDGVDGRQHSDVRTNSGERRESQEQQNDGKLRGNKAPKREGTPAKTHLLQ
EDILPYSRPTFPTSNNPRDPSSSSSMSSRGSGGRQRADQANIARRNVAEMQVLGAYEQGE
EEEEEMEETES
NT seq
5076 nt
NT seq
+upstream
nt +downstream
nt
atgggcagccgggccgcctttgccccccggcgcggtgccgccagctgccgccggccagtg
gccaccgcgggcgggggctgcccggggctgggcgcggggacccgggggtacgcggcgccg
gtgcggccctggagctgtgggcgccccgtcccccccgccggcagcgcctgggggccgtgt
ggtgtagcggtggctgccgctgagccccggcggcggggggcgccccggcctcccgcggga
ggtgggctggagctccccgggggagaggccgcaggttcccgtcttcggcaagaagatttc
ccacctcgaattgtcgaacacccttctgatttaattgtttccaaaggagaaccagcaact
ttaaactgtaaagcagaaggaagaccgacccccaccattgagtggtacaagggcggggaa
agagtggaaacagacaaggatgatccacgctcccaccgcatgctgctgcccagtgggtct
ttatttttcttacgtatagtccatgggcgcaagagtaggccagatgaaggggtctatgtc
tgtgtggcaaggaattaccttggggaagctgtaagtcacaatgcgtcgctggaggtggca
attctacgggacgacttcagacaaaatccatcggatgtaatggtagccgtgggtgaacct
gcagtgatggaatgtcagcccccaagaggtcatccagaacccactatatcgtggaaaaaa
gatgggacccctctagatgacaaagatgagagaattacaatcagaggaggaaagcttatg
atcacatacacaagaaagaatgacgctggcaaatacgtttgtgttggaacaaatatggtt
ggagaacgtgaaagtgaagttgcggagctcactgttttagagagaccatcttttgtgaag
agaccaagtaatttggctgtaactgtggatgacagtgcggagttcaagtgtgaggcaaga
ggtgacccggtccctacagtaagatggaggaaggatgatggggaattaccaaaagcaaga
tacgaaatccgtgatgatcataccttgaaaatccggaaagttatggcaggagacatgggc
tcgtatacttgtgttgcagaaaatatggttggaaaagctgaagcatcagcaactctgaca
gttcaaggtaagaatgtttctccacagtttgttgtaaagcctcgagatcaggtagctgca
ctggggagaacggtgactttccagtgtgaagcaactgggaaccctcagccggccatcttt
tggcggagagagggaagtcagaatctgcttttctcataccagccccctcagtcatccagc
cgattttcagtttcccagacaggggacctcactatcaccaacgtccagagatctgatgtt
gggtactatatctgccagactttaaatgttgcaggaagtatcataacaaaagcctacttg
gaagttactgatgtgattgcagaccggcctccccctgtcattcggcagggtcctgtgaat
cagactgtagctgtagatggtactttagtactgagctgtgtggccacaggcactttaatg
cccactatcctctggaaaaaggatgggatcctcatttctacccaggactcccgcatcaag
cagctggagaccggagcattacagatccgatatgccaagctgggcgacactggtcggtac
acctgcattgcttcaaccccaagtggcgaagctacatggagtgcatacatagaggtccaa
gagtttggagtcccagtgcagccaccaagacccactgacccaaacttgattcctagtgct
ccatcaaaacctgaggttacagatgtcagcagaaatacagtaactttgtcatggcaacct
aatttgaattcaggtgcaacaccaacctcttacataattgaggccttcagccacgcatct
gggagcagctggcaaactgtagctgaaaatgtgaaaacagagagttttgcagttaaaggg
ctaaaacctaatgcaatttatctgttccttgtgagggcagctaatgcatatggactaagt
gacccaagccaaatatctgatccagtgaaaactcaagatgttccaccaacaagtcaaggt
gtggatcacaagcaggtccagagagaactaggcgatgtggtactacatctgcacaaccct
actatcctttcttcctcctcaattgaagttcattggacagtggaccagcaatcccagtat
attcagggatacaaaattctgtaccggcctacaccagcatcctatggagagtcagagtgg
ttaatctttgaagtgaggactccaaccaaaaacagcgttatcattcccgagctgaagaaa
ggtgtaaactacgaaatcaaggcccgccctttttttaatgagtttcagggggcagatagc
gaagtgaaatttgcaaagaccctggaagaagctcctagtgctccacctcagagtgtttca
gtaactaagaacgatgggaacgggacggctattgtggtcacctggcagccgccccccgag
gacaaccaaaacgggatggttcaagaatataaggtttggtgtcttggcaatgaaagtcga
taccatataaacaagacagtagacggttccaccttttctgtagtcatcccctccttagtt
cctggtattcgatacagcgtggaagtggcagcaagtactggggcaggacctggagtgaaa
agcgatccccagtttatccaattagattctcatggaaaccctgtgtcttcagaagatcaa
gtcagcttagcccagcagatttctgatgtagtaaagcagcctgcctttattgctggaatt
ggtgcagcctgttggattatccttatggtcttcagcatctggttatatcgccacaggaag
aagcgaaatggactcactagtacttacgctggtatcagaaaagtcccgtcttttaccttc
acaccaacagtaacgtatcagagaggaggagaggccgtaagcagtggaggcaggccagga
ctcctaaacatcagtgaaccagccgctcagccatggctagcagatacttggcctaacaca
gggaacaatcacaatgactgctccatcaactgctgtacctctggcaatggaaacagtgat
agcaaccttacgacgtacagtcgaccagccgattgtatagcaaattacaacaatcagctg
gacaacaagcaaacaaacctgatgttgcctgagtcaactgtatatggtgacgtggacctc
agcaacaaaatcaatgagatgaaaaccttcaatagtccaaatctaaaggacggaagattt
gtcagccagcctgggcagcccactccttatgctaccactcaactcatccagtcaaatatc
agcaataatgttaacaatggcagcggggatacgaatgagaaacactggaaaccctctgtt
cagcaaaagcaagaggttgcacccatacagtacaacattatggagcaaaacaaattaaac
aaagattaccgggtaaatgacaacattgctccaactattccgtacaaccagtcctacgac
cagaacacaggtggatcttacaacagctcagacagaggcagtagtacatctgggagtcaa
gggcacaagaagggtgctcggaccccaaaggctcccaagcaagctggcatgaactgggca
gatcttcttccaccccctccagcacatccacctccccatagcaatagtgaagattacagt
ctttcagtggatgaaagctatgaccaagaaattccttgtcctgtcccacctgcaaggatg
tatctgcagcaggatgagctagaggaagaggaagaagatgagcgaggtcctactccacct
gtccgaggagcagcttcctctccagccgctgtctcctatagccatcagtcaactgccact
ctcaccccctctccccaagaagaactccagcccatgttacaggactgtcaggaagatctg
ggacacatacaacaccaacctgaccggagacgtcagcctgtgagtcctccaccccctcca
aggcctatctccccaccacacacctatggatatatctcagggcccttggtctctgatatg
gatactgatgcaccagaagaggaggaggatgaggccgatgtagaagttgccaagatgcag
aacagaaggctccttttgcgtggccttgagcaaacacctgcctccagcgttggggatttg
gagagctctgtaacagggtccatgatcaatggctggggttcagcctccgaagaagataac
atctcaagcgggcggtctagcgttagctcttcagatggatcattttttaccgacgcagat
tttgcacaggctgttgcagcagctgcggaatatgctggcctgaaagtagccagacgtcaa
atgcaggatgcagcaggaggccgtagacattttcatgcatcacactgtcctagacccacc
agccccatgtctaccgatagcaacatgagtgctgttgtaatacagaaggtccgacctgcc
aaaaagcaaaaacaccagccaggacatctgcgcagagaagtctacacagatgacttgcca
ccccctcctgtgccacctccagcaataaaatcaccaaccgcccagtccaaatcacagctg
gaggtgcggccggtcatgttgccaaaacttgcttctatagaagcgaggacagacaggtct
gcggaaaggaaaggagcgagctacaaggggagggacggggtggatgggcgacagcattca
gacgtgcggacaaattcaggagagcggagagaatcacaggagcagcaaaatgatgggaaa
ctgcgaggaaataaagcaccaaaacgagaaggcacaccagcaaaaactcatcttcttcaa
gaggacatcctgccatattctagaccaacgtttccaacatcaaataatcctagagatccc
agctcctccagctctatgtcatcaagaggatcaggaggcagacagagggcagaccaagca
aatatagcccgaaggaatgttgcagaaatgcaagtactgggagcgtatgaacaaggagaa
gaggaagaagaagagatggaggaaacggaaagctga
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integrated database retrieval system
