Phalacrocorax aristotelis (European shag): 142061598
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Entry
142061598 CDS
T11493
Symbol
DDX46
Name
(RefSeq) putative ATP-dependent RNA helicase DDX46
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
parx Phalacrocorax aristotelis (European shag)
Pathway
parx03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
parx00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
142061598 (DDX46)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
parx03041
]
142061598 (DDX46)
Enzymes [BR:
parx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
142061598 (DDX46)
Spliceosome [BR:
parx03041
]
Complex A
U2 snRNP components
U2 related factors
142061598 (DDX46)
Complex B
142061598 (DDX46)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
142061598
NCBI-ProteinID:
XP_074959006
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All DBs
Position
8:complement(42886480..42911414)
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AA seq
1045 aa
AA seq
DB search
MGRESRHYRKRSASRGRSGSRSRSRSPSDKRGKRGEDRRSRSRDRERRRERSRSRDKRRS
RSRDRKRQRRSRSRERERSRERRRSRSRERRRSRSRSRGRRSRSSSPSKNRKTENRSRSK
ERTEGVEVSKEKKKDKDDKEEEKDKDATTNTVATENFDQNKLEEEMRKRKERVEKWREEQ
RKKAMENIGELKKEIEEMKQGKKWSLEDDDDDEEETAEGEKEGNEVEDEELDPLDAYMEE
VKEEVKKFNMRSVKGGGGSEKKSGPTVTKVVTVVTTKKAAAESEKKKGELMENDQDAMEY
SSEEEEVDLQTALTGYQTKQRKLLEPVDHGKIEYEPFRKNFYVEVPELAKMTQEEVNVYR
LELEGITVKGKGCPKPIKTWVQCGISMKILTALKKHGYEKPTPIQTQAIPAIMNGRDLIG
IAKTGSGKTIAFLLPMFRHIMDQRALEEGEGPIAVIMTPTRELALQITKECKKFSKTLGL
RVVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANNGRVTNLRRVTYVVLDEADRM
FDMGFEPQVMRIVDNVRPDRQTVMFSATFPRAMEALARRILSKPIEVQVGGRSVVCSDVE
QHVIVIEEENKFLKLLELLGHYQEKGSVIIFVDKQEHADGLLKDLMRASYPCLSLHGGID
QYDRDSIINDFKNGICKLLVATSVAARGLDVKQLMLVVNYSCPNHYEDYVHRAGRTGRAG
NKGYAYTFITEDQARYAGDIIKALELSGNPIPTDLEKLWADFKDQQKAEGKLIKKSSGFS
GKGFKFDETEQALANERKKLQKAALGLQDSDDEDTAVDIDEQIESMFNSKKRVKDMAAPG
TSNAPTPSAGNAEKLEIAKRLALRINAQKNLGAEAQVLVPFHFKDVMQQATNAILRGGTI
QAPTVSAKTIAEQLAEKINAKLNYVPIEKQEEEKQDGGQNESFKRYEEELEINDFPQTAR
WKVTSKEALQRISEYSEAAITIRGTYFPPGKEPKEGERKIYLAIESANELAVQKAKAEIT
RLIKEELIRLQNSYQPTNKGRYKVL
NT seq
3138 nt
NT seq
+upstream
nt +downstream
nt
atgggccgggagtctaggcattatcggaagcgctctgcgtcacgtggacgctctggtagc
cgttctcgaagtcgttctccgtctgacaaaagaggaaaacgcggagaagacagacgctct
agaagtagggatcgagaacgtagacgtgagaggtcacgcagtagggacaagagaaggtcg
cgatcgcgtgacagaaagcgtcaaagacgttcaagaagcagagaaagggaacggagccga
gagagaagaagatcccggagccgagagaggaggcgctctagaagcagaagtagaggtaga
cggtctcgatcctccagcccaagcaagaacaggaaaacagaaaacagatcaagatctaaa
gaaaggacagaaggcgtggaagtttccaaagaaaagaaaaaagacaaagacgacaaagaa
gaagagaaggataaggatgctaccacaaatactgtggctactgagaattttgatcagaac
aaactagaagaagaaatgagaaaacgaaaagaaagagtggagaaatggagggaagaacaa
cgcaaaaaggcgatggaaaacataggagaactgaaaaaagaaattgaagagatgaaacag
gggaaaaaatggagtttagaagatgatgatgatgatgaagaggaaactgcagaaggagaa
aaagaaggcaatgaggttgaagatgaagagttagatcctttggatgcttatatggaagaa
gtaaaagaagaggtcaagaagttcaatatgagaagtgtgaaaggtggaggtgggagtgaa
aagaaatctggaccaactgttaccaaggtggtaaccgtggtgacaaccaaaaaggcagct
gcagagtcagagaagaagaaaggggagcttatggagaatgaccaagatgcgatggagtat
tcttcagaagaggaggaagtcgatctgcagactgccctgactggctaccagaccaagcag
agaaagctgctagaaccagtggatcatggaaaaatagaatacgaacctttcaggaaaaac
ttctatgttgaagtaccagaactagctaaaatgactcaagaagaggtgaatgtgtacagg
ctggagttggagggaattacggtcaagggaaaaggctgccccaaaccaataaaaacctgg
gtacagtgtggtatttccatgaagattctcactgccctcaaaaaacatggctatgaaaag
cccactcccattcaaacccaggctatcccagcaattatgaatggacgtgatctgattggc
attgctaaaacaggaagcggaaaaactattgcatttctgttgcccatgttcagacacatt
atggatcagagagcgttagaagagggagaaggtcccatagccgtcattatgacacctact
cgcgagttggctttgcagattaccaaggagtgtaagaaattctcaaagacacttggactt
cgagttgtctgtgtttacggaggaacaggaatcagtgagcagatagctgaactcaaaaga
ggtgctgaaattattgtttgcacacctggacgtatgattgacatgttagcagctaacaat
ggtcgggtgacaaatctccgtagagtcacatatgttgtactcgatgaagcagacagaatg
tttgacatgggttttgagcctcaggttatgcgcattgtagacaacgtcaggcctgatcgt
cagactgtcatgttctctgctacttttcccagagctatggaggcattagctcggagaatc
ctaagtaaacctatagaagtacaggtcggaggcagaagtgttgtctgttctgatgtggag
caacatgttattgtcatagaagaggagaacaagtttttgaagttactggagctactggga
cactatcaggagaaaggatccgttatcatatttgtagataaacaagaacacgctgacggg
ttgttgaaagatttaatgagagcctcttatccttgcttgtctcttcatggaggcattgat
cagtatgacagagacagcataattaatgatttcaagaacggaatttgcaagcttctggtg
gctacgtctgtagcggcaaggggcttggatgtaaaacagttgatgctggtggtcaattac
agctgtcccaaccattatgaagattatgtgcaccgagcaggccgaactgggcgagccggc
aataaagggtatgcgtatacgttcattactgaggatcaggcacggtatgctggtgatatc
attaaagctttggaattgtcagggaatccgatacctactgatttggagaagctctgggct
gacttcaaagaccaacagaaggctgagggaaagttgattaaaaaaagcagcggattctct
ggcaaaggttttaaatttgatgaaacagaacaggctttggctaatgaaagaaagaagcta
caaaaagcagctcttggcttgcaagattcagatgatgaagacacagctgttgatatcgat
gaacaaattgaaagcatgttcaattcaaagaaaagagtaaaagacatggcagcaccagga
acatcaaatgctcctacaccgtcggctgggaatgcagaaaaattggagattgctaaaaga
ttggctttgagaatcaatgctcagaagaatcttggagcagaggcacaagtattggtcccc
ttccactttaaggatgtgatgcagcaggctacaaatgccatcctgaggggaggcacaatt
caagctcctactgtgtctgccaagaccattgcagagcaactggctgaaaaaatcaatgct
aagctcaattacgtacccatagagaagcaggaggaagagaaacaggatggaggacaaaac
gaatcctttaagagatacgaagaagaactggagatcaatgacttcccacagacggccaga
tggaaagttacctccaaagaagcgctacagagaatcagtgaatattctgaagctgctatt
acaatcagaggaacttatttccctccaggcaaagaacccaaggaaggagaacgaaagatt
tatttggctatagaaagtgccaacgaactggctgtacagaaagcaaaggcagaaatcaca
cgacttataaaagaggagctcatcagattgcaaaattcataccaaccgaccaacaaagga
agatacaaagttctatga
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integrated database retrieval system
